New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4363036 =	28 (0.620)	4 (0.090)	4/242	NT	12.6%	coding (78/1011 nt)	adhP	alcohol dehydrogenase
	?	NC_002947	4363059 =	28 (0.640)					coding (101/1011 nt)	adhP	alcohol dehydrogenase

TGCCTGGGCCGGCAAGGTCTATGCTATCCCGACGATCACCCAAGCTCACATCGGATAGACACGGAGGCTCTCATGAAAGCTGCTGTCGTTGCACCAGGCCGTCGCGTGGACGTGATAGAGAAAAGCCTGCGCCCTCTCGAACACGGCGAAGCGCTGCTGAAGATGCAGTGCTGCGGTGTGTGCCACACCGACCTGCACGTCAAAAATGGCGACTTTGGTGACAAGACCGGGGTAGTACTGGGCCACGAAGGTATTGGCGTGGTTCAGGAAGTTGGCCCGGGCGTCACCTCGCTC  >  NC_002947/4362887‑4363180                                                                                                                                                      |                                                                                                                                                 tGCCTGGGCCGGCAAGGTCTATGCTATCCCGACGATCCGGAAAGCTCACATCGGATAGACACGGAGGCTCTCATGAAAGCTGCTGTCGTTGCACCAGGCCGTCGCGTGGACGTGATAGAGAAAAGCCTGCGCCCTCTCGAACACGGCGaa                                                                                                                                                  <  1:11721/150‑1 (MQ=255)  gCCTGGGCCGGCAAGGTCTATGCTATCCCGACGATCACCCAAGCTCACATCGGATAGACACGGAGGCTCTCATGAAAGCTGCTGTCGTTGCACCAGGCCGTCGCGTGGACGTGATAGAGAAAAGCCTGCGCCCTCTCGAACACGGCGAAg                                                                                                                                                 <  2:160781/150‑1 (MQ=255)            gCAAGGTCTATGCTATCCCGACGATCACCCAAGCTCACATCGGATAGACACGGAGGCTCTCATGAAAGCTGCTGTCGTTGCACCAGGCCGTCGCGTGGACGTGATAGAGAAAAGCCTGAGCCCTCCCGAACCCGGTGATGCTCTGCGGaa                                                                                                                                       <  2:744394/150‑1 (MQ=255)                        cTATCCCGACGATCACCCAAGCTCACATCGGATAGACACGGAGGCTCTCATGAAAGCTGCTGTCGTTGCACCAGGCCGTCGCGTGGACGTGATAGAGAAAAGCCTGCGCCCTCTCGAACACGGCGAAGCGCTGCTGAAGATGCAGtgctg                                                                                                                           >  1:772821/1‑150 (MQ=255)                                acgaTCACCCAAGCTCACATCGGATAGACACGGAGGCTCTCATGAAAGCTGCTGTCGTTGCACCAGGCCGTCGCGTGGACGTGATAGAGAAAAGCCTGCGCCCTCTCGAACACGGCGAAGCGCTGCTGAAGATGCAGTGCTGCGgtgtgt                                                                                                                   <  2:772821/150‑1 (MQ=255)                                acgaTCACCCAAGCTCACATCGGATAGACACGGAGGCTCTCATGAAAGCTGCTGTCGTTGCACCAGGCCGTCGCGTGGACGTGATAGAGAAAAGCCTGCGCCCTCTCGAACACGGCGAAGCGCTGCTGAAGATGCAGTGCTGCGgtgtgt                                                                                                                   <  2:350712/150‑1 (MQ=255)                                              gccaacttcctgaaccacgccaataccttcgtggcccagtactaccccggtcttgtcaccaaagtcgccatttttgacgtgcaggtcggtgtggcacacaccgcAg                                                                                                                                                 <  1:1070196‑M1/2‑1 (MQ=255)                                              gccaacttcctgaaccacgccaataccttcgtggcccagtactaccccggtcttgtcaccaaagtcgccatttttgacgtgcaggtcggtgtggcacacaccgcAg                                                                                                                                                 >  2:1070196‑M1/105‑106 (MQ=255)                                                 caTCGGATAGACACGGAGGCTCTCATGAAAGCTGCTGTCGTTGCACCAGGCCGTCGCGTGGACGTGATAGAGAAAAGCCTGCGCCCTCTCGAACACGGCGAAGCGCTGCTGAAGATGCAGTGCTGCGGTGTGTGCCACACCGACCTGCAc                                                                                                  <  2:241784/150‑1 (MQ=255)                                                             acGGAGGCTCTCATGAAAGCTGCTGTCGTTGCACCAGGCCGTCGCGTGGACGTGATAGAGAAAAGCCTGCGCCCTCTCGAACACGGCGAAGCGCTGCTGAAGATGCAGTGCTGCGGTGTGTGCCACACCGACCTGCACGTCAAAAATGGc                                                                                      <  1:577722/150‑1 (MQ=255)                                                                     tctcATGAAAGCTGCTGTCGTTGCACCAGGCCGTCGCGTGGACGTGATAGAGAAAAGCCTGCGCCCTCTCGAACACGGCGAAGCGCTGCTGAAGATGCAGTGCTGCGGTGTGTGCCacac                                                                                                            <  1:1121481/120‑1 (MQ=255)                                                                     tctcATGAAAGCTGCTGTCGTTGCACCAGGCCGTCGCGTGGACGTGATAGAGAAAAGCCTGCGCCCTCTCGAACACGGCGAAGCGCTGCTGAAGATGCAGTGCTGCGGTGTGTGCCacac                                                                                                            >  2:1121481/1‑120 (MQ=255)                                                                     tctcATGAAAGCTGCTGTCGTTGCACCAGGCCGTCGCGTGGACGTGATAGAGAAAAGCCTGCGCCCTCTCGAACACGGCGAAGCGCTGCTGAAGATGCAGTGCTGCGGTGTGTGCCACACCGACCTGCACGTCAAAAATGGCGACTTTgg                                                                              >  2:153458/1‑150 (MQ=255)                                                                     tctcATGAAAGCTGCTGTCGTTGCACCAGGCCGTCGCGTGGACGTGATAGAGAAAAGCCTGCGCCCTCTCGAACACGGCGAAGCGCTGCTGAAGATGCAGTGCTGCGGTGTGTGCCACACCGACCTGCACGTCAAAAATGGCGACTTTgg                                                                              <  1:514313/150‑1 (MQ=255)                                                                            aaaGCTGCTGTCGTTGCACCAGGCCGTCGCGTGGACGTGATAGAGAAAAGCCTGCGCCCTCTCGAACACGGCGAAGCGCTGCTGAAGATGCAGTGCTGCGGTGTGTGCCACACCGACCTGCACGTCAAAAATg                                                                                        >  2:311329/1‑133 (MQ=255)                                                                            aaaGCTGCTGTCGTTGCACCAGGCCGTCGCGTGGACGTGATAGAGAAAAGCCTGCGCCCTCTCGAACACGGCGAAGCGCTGCTGAAGATGCAGTGCTGCGGTGTGTGCCACACCGACCTGCACGTCAAAAATg                                                                                        <  1:311329/133‑1 (MQ=255)                                                                                  gctgTCGTTGCACCAGGCCGTCGCGTGGACGTGATAGAGAAAAGCCTGCGCCCTCTCGAACACGGCGAAGCGCTGCTGAAGATGCAGTGCTGCGGTGTGTGCCACACCGACCTGCACGTCAAAAATGGCGACTTTGGTGACAAGACCggg                                                                 <  1:753806/150‑1 (MQ=255)                                                                                  gctgTCGTTGCACCAGGCCGTCGCGTGGACGTGATAGAGAAAAGCCTGCGCCCTCTCGAACACGGCGAAGCGCTGCTGAAGATGCAGTGCTGCGGTGTGTGCCACACCGACCTGCACGTCAAAAATGGCGACTTTGGTGACAAGACCggg                                                                 <  1:727243/150‑1 (MQ=255)                                                                                           cccggtcttgtcaccaaagtcgccatttttgacgtgcaggtcggtgtggcacacaccgcAGCGCTGCTGAAGATGCAGTGCTGCGGTGTGTGc                                                                                                                 <  1:259672‑M1/34‑1 (MQ=255)                                                                                           cccggtcttgtcaccaaagtcgccatttttgacgtgcaggtcggtgtggcacacaccgcAGCGCTGCTGAAGATGCAGTGCTGCGGTGTGTGc                                                                                                                 >  2:259672‑M1/60‑93 (MQ=255)                                                                                             aCCAGGCCGTCGCGTGGACGTGATAGAGAAAAGCCTGCGCCCTCTCGAACACGGCGAAGCGCTGCTGAAGATGCAGTGCTGCGGTGTGTGCCACACCGACCTGCACGTCAAAAATGGCGACTTTGGTGACAAGACCGGGGTAGTACTggg                                                      >  2:154860/1‑150 (MQ=255)                                                                                              ccAGGCCGTCGCGTGGACGTGATAGAGAAAAGCCTGCGCCCTCTCGAACACGGCGAAGCGCTGCTGAAGATGCAGTGCTGCGGTGTGTGCCACACCGACCTGCACGTCAAAAATGGCGACTTTGGTGACAAGACCGGGGTAGTACTGGGc                                                     >  2:209256/1‑150 (MQ=255)                                                                                                     gTCGCGTGGACGTGATAGAGAAAAGCCTGCGCCCTCTCGAACACGGCGAAGCGCTGCTGAAGATGCAGTGCTGCGGTGTGTGCCACACCGACCTGCACGTCAAAAATGGCGACTTTGGTGACAAGACCGGGGTAGTACTGGGCCACGAAg                                              <  1:1026922/150‑1 (MQ=255)                                                                                                                gccatttttgacgtgcaggtcggtgtggcacacaccgcAGCGCTGCTGAAGATGCAGtg                                                                                                                              >  2:584628‑M1/39‑59 (MQ=255)                                                                                                                gccatttttgacgtgcaggtcggtgtggcacacaccgcAGCGCTGCTGAAGATGCAGtg                                                                                                                              <  1:584628‑M1/21‑1 (MQ=255)                                                                                                                 tGATAGAGAAAAGCCTGCGCCCTCTCGAACACGGCGAAGCGCTGCTGAAGATGCAGTGCTGCGGTGTGTGCCACACCGACCTGCACGTCAAAAATGGCGACTTTGGTGACAAGACCGGGGTAGTACTGGGCCACGAAGGTATTGGCGTgg                                  <  1:873622/150‑1 (MQ=255)                                                                                                                   aTAGAGAAAAGCCTGCGCCCTCTCGAACACGGCGAAGCGCTGCTGAAGATGCAGTGCTGCGGTGTGTGCCACACCGACCTGCACGTCAAAAATGGCGACTTTGGTGACAAGACCGGGGTAGTACTGGGCCACGAAGGTATTGGCGTGGtt                                <  2:1049891/150‑1 (MQ=255)                                                                                                                     agagAAAAGCCTGCGCCCTCTCGAACACGGCGAAGCGCTGCTGAAGATGCAGTGCTGCGGTGTGTGCCACACCGACCTGCACGTCAAAAATGGCGACTTTGGTGACAAGACCGGGGTAGTACTGGGCCACGAAGGTATTGGCGTGGTTCa                              <  1:154860/150‑1 (MQ=255)                                                                                                                      gagaAAAGCCTGCGCCCTCTCGAACACGGCGAAGCGCTGCTGAAGATGCAGTGCTGCGGTGTGTGCCACACCGACCTGCACGTCAAAAATGGCGACTTTGGTGACAAGACCGGGGTAGTACTGGGCCa                                                   <  2:834194/128‑1 (MQ=255)                                                                                                                      gagaAAAGCCTGCGCCCTCTCGAACACGGCGAAGCGCTGCTGAAGATGCAGTGCTGCGGTGTGTGCCACACCGACCTGCACGTCAAAAATGGCGACTTTGGTGACAAGACCGGGGTAGTACTGGGCCa                                                   >  1:834194/1‑128 (MQ=255)                                                                                                                      gagaAAAGCCTGCGCCCTCTCGAACACGGCGAAGCGCTGCTGAAGATGCAGTGCTGCGGTGTGTGCCACACCGACCTGCACGTCAAAAATGGCGACTTTGGTGACAAGACCGGGGTAGTACTGGGCCACGAAGGTATTGGCGTgg                                  >  2:711413/1‑145 (MQ=255)                                                                                                                      gagaAAAGCCTGCGCCCTCTCGAACACGGCGAAGCGCTGCTGAAGATGCAGTGCTGCGGTGTGTGCCACACCGACCTGCACGTCAAAAATGGCGACTTTGGTGACAAGACCGGGGTAGTACTGGGCCACGAAGGTATTGGCGTgg                                  <  1:711413/145‑1 (MQ=255)                                                                                                                         aaaaGCCTGCGCCCTCTCGAACACGGCGAAGCGCTGCTGAAGATGCAGTGCTGCGGTGTGTGCCACACCGACCTGCACGTCAAAAATGGCGACTTTGGTGACAAGACCGGGGTAGTACTgg                                                       <  2:281328/121‑1 (MQ=255)                                                                                                                         aaaaGCCTGCGCCCTCTCGAACACGGCGAAGCGCTGCTGAAGATGCAGTGCTGCGGTGTGTGCCACACCGACCTGCACGTCAAAAATGGCGACTTTGGTGACAAGACCGGGGTAGTACTgg                                                       >  1:281328/1‑121 (MQ=255)                                                                                                                                           gAACACGGCGAAGCGCTGCTGAAGATGCAGTGCTGCGGTGTGTGCCACACCGACCTGCACGTCAAAAATGGCGACTTTGGTGACAAGACCGGGGTAGTACTGGGCCACGAAGGTATTGGCGTGGTTCAGGAAGTTGGCCCGGGCGTCAcc        >  2:1049661/1‑150 (MQ=255)                                                                                                                                               acGGCGAAGCGCTGCTGAAGATGCAGTGCTGCGGTGTGTGCCACACCGACCTGCACGTCAAAAATGGCGACTTTGGTGACAAGACCGGGGTAGTACTGGGCCACGAAGGTATTGGCGTGGTTCAGGAAGTTGGCCCGGGCGTCACCTCGc    <  1:153458/150‑1 (MQ=255)                                                                                                                                                 gtggAACCGCTGCTGAAGATTCAGAGCTGCGGCGTGTGCCACACCGCCCTGCCCGTCAAAAATGGCGACTTTGGTGACAAAACGGGGGTAGAACTGGGCCACGAAGGTATTGGCGTCGTTGAGGAAGTTGGCCCGGGCGTCACCTCGGTc  >  2:462112/4‑150 (MQ=255)                                                                                                                                                      |                                                                                                                                                 TGCCTGGGCCGGCAAGGTCTATGCTATCCCGACGATCACCCAAGCTCACATCGGATAGACACGGAGGCTCTCATGAAAGCTGCTGTCGTTGCACCAGGCCGTCGCGTGGACGTGATAGAGAAAAGCCTGCGCCCTCTCGAACACGGCGAAGCGCTGCTGAAGATGCAGTGCTGCGGTGTGTGCCACACCGACCTGCACGTCAAAAATGGCGACTTTGGTGACAAGACCGGGGTAGTACTGGGCCACGAAGGTATTGGCGTGGTTCAGGAAGTTGGCCCGGGCGTCACCTCGCTC  >  NC_002947/4362887‑4363180

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.