| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4817931 = | 30 (0.660) | 5 (0.110) | 5/246 | NT | 14.5% | coding (582/795 nt) | PP_4242 | conserved protein of unknown function with Rhs repeat‑associated core domain |
| ? | NC_002947 | 4817955 = | 29 (0.650) | coding (606/795 nt) | PP_4242 | conserved protein of unknown function with Rhs repeat‑associated core domain | |||||
TGCATGTTCTTCAATTAAATAACTTTCCCTGGTTGCCTCATTTTTCCCATCCCATATTTTTTTGATCTTGCCCGCAGCCACAAGCACATCGAAATCCTTGATGTACACACCAAATACACGAGCTTCACCTTTGTGAAGCTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4818072‑4817931‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gTGTATTTGGTGTGTACATCAAGGATTTCGATGTGCTTGTGGCTGCGGGCAAGATCAAAAAAATATGGGATGGGAAAAATGAGGCAACCAGGGAAAGTTATTTAATTGAAGAACATGCATTTACTAATATTCGAGTA > NC_002947/4817955‑4818090 TGCATGTTCTTCAATTAAATAACTTTCCCTGGTTGCCTCATTTTTCCCATCCCATATTTTTTTGATCTTGCCCGCAGCCACAAGCACATCGAAATCCTTGATGTACACACCAAATACACCAGCTTCACAAAGGTGAAGCTCGTGTATTTG < 1:823516/150‑1 CCTGGTTGCCTCATTTTTCCCATCCCATATTTTTTTGATCTTGCCCGCAGCCACAAGCACATCGAAATCCTTGATGTACACACCAAATACACAAGCTTCACAAAGGTGAAGCTCGTGTATTTGGTGTGTACATCAAGGATTTCGATGTGC < 1:388592/150‑1 CACAAGCACATCGAAATCCTTGATGTACACACCAAATACACAAGCTTCACAAAGGTGAAGCTCGTGTATTTGGTGTGTACATCAAGGATTTCGAT > 1:717849/1‑95 CACAAGCACATCGAAATCCTTGATGTACACACCAAATACACAAGCTTCACAAAGGTGAAGCTCGTGTATTTGGTGTGTACATCAAGGATTTCGAT < 2:717849/95‑1 CTTTGTGAAGCTTGTGTATTTGGTGTGTACATCAAGGATTTCGATGTGCTTGTGGCTGCGGGCAAGATCAAAAAAATATGGGATGGGAAAAATGAGGCAACCAGGGAAAGTTATTTAATTGAAGAACATGCATTTACTAATATTCGAGTA < 2:823516/150‑1 TGCATGTTCTTCAATTAAATAACTTTCCCTGGTTGCCTCATTTTTCCCATCCCATATTTTTTTGATCTTGCCCGCAGCCACAAGCACATCGAAATCCTTGATGTACACACCAAATACACGAGCTTCACCTTTGTGAAGCTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4818072‑4817931‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gTGTATTTGGTGTGTACATCAAGGATTTCGATGTGCTTGTGGCTGCGGGCAAGATCAAAAAAATATGGGATGGGAAAAATGAGGCAACCAGGGAAAGTTATTTAATTGAAGAACATGCATTTACTAATATTCGAGTA > NC_002947/4817955‑4818090 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |