| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5158987 = | 47 (1.040) | 3 (0.070) | 3/238 | NT | 6.1% | coding (1035/1833 nt) | PP_4542 | ABC transporter ATP‑binding protein/permease |
| ? | NC_002947 | 5159052 = | 48 (1.110) | coding (1100/1833 nt) | PP_4542 | ABC transporter ATP‑binding protein/permease | |||||
CGATTTTCTCACCCGGGCGGATGTCCAGGTTGAGCCCTTCTATGACATTGGTGGCCTTGCCGTAATGGAAGTCGACGTCAACGAAACGCACCGCGCCGCGGCTGACCTTCAGGGCCGGCGCATTGGGCGGGTCGGTGACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5159126‑5158987‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgacgTCGACTTCCATTACGGCAAGGCCACCAATGTCATAGAAGGGCTCAACCTGGACATCCGCCCGGGTGAGAAAATCGGTTTGATCGGCCCGTCCGGGGCAGGCAAGTCGACTCTGGTCAACCTGCTGTTGCGTCTGTACGACGTGCAGGG > NC_002947/5159052‑5159199 CGATTTTCTCACCCGGGCGGATGTCCAGGTTGAGCCCTTCTATGACATTGGTGGCCTTGCCGTAATGGAAGTCGACGTCAACGAAACGCACCGCGCCGCGGCTGACCTTCAGGGCCGGCGCATTGGGCGGGTCGGTGA > 1:610400/1‑138CGATTTTCTCACCCGGGCGGATGTCCAGGTTGAGCCCTTCTATGACATTGGTGGCCTTGCCGTAATGGAAGTCGACGTCAACGAAACGCACCGCGCCGCGGCTGACCTTCAGGGCCGGCGCATTGGGCGGGTCGGTGA < 2:610400/138‑1 AACGAAACGCACCGCGCCGCGGCTGACCTTCAGGGCCGGCGCATTGGGCGGGTCGGTGACGTCGACTTCCATTACGGCAAGGCCACCAATGTCATAGAAGGGCTCAACCTGGACATCCGCCCGGGTGAGAAAATCGGTTTGATCGGCCCG > 2:1100316/1‑150 CCGCGCCGCGGCTGACCTTCAGGGCCGGCGCATTGGGCGGGTCGGTGACGTCGACTTCCATTACGGCAAGGCCACCAATGTCATAGAAGGGCTCAACCTGGACATCCGCCCGGGTGAGAAAATCGGTTTGATCGGCCCGTCCGGGGCAGG > 2:1182517/1‑150 GACCTTCAGGGCCGGCGCATTGGGCGGGTCGGTGACGTCGACTTCCATTACGGCAAGGCCACCAATGTCATAGAAGGGCTCAACCTGGACATCCGCCCGGGTGAGAAAATCGGTTTGATCGGCCCGTCCGGGGCAGGCAAGTCGACTCTG < 1:1100316/150‑1 CGTCGACTTCCATTACGGCAAGGCCACCAATGTCATAGAAGGGCTCAACCTGGACATCCGCCCGGGTGAGAAAATCGGTTTGATCGGCCCGTCCGGGGCAGGCAAGTCGACTCTGGTCAACCTGCTGTTGCGTCTGTACGACGTGCAGGG < 1:770951/150‑1 CGATTTTCTCACCCGGGCGGATGTCCAGGTTGAGCCCTTCTATGACATTGGTGGCCTTGCCGTAATGGAAGTCGACGTCAACGAAACGCACCGCGCCGCGGCTGACCTTCAGGGCCGGCGCATTGGGCGGGTCGGTGACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5159126‑5158987‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgacgTCGACTTCCATTACGGCAAGGCCACCAATGTCATAGAAGGGCTCAACCTGGACATCCGCCCGGGTGAGAAAATCGGTTTGATCGGCCCGTCCGGGGCAGGCAAGTCGACTCTGGTCAACCTGCTGTTGCGTCTGTACGACGTGCAGGG > NC_002947/5159052‑5159199 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |