| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5331243 = | 51 (1.130) | 3 (0.070) | 3/226 | NT | 6.8% | coding (366/1173 nt) | PP_4692 | aspartate/tyrosine/aromatic aminotransferase |
| ? | NC_002947 | 5331289 = | 36 (0.880) | coding (320/1173 nt) | PP_4692 | aspartate/tyrosine/aromatic aminotransferase | |||||
GGTCTGCCGGCACTGCGTGAGGCAATTGCCGGTTTTTATGGGCAGCGCTATGGCCTGAACATCGACCCGGAACGCATCCTTATTACCCCCGGTGGCTCCGGCGCGCTGCTGCTGGCCAGCAGCCTGCTGGTGGACCCGGGCAAGCACTGGCTGCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5331401‑5331243‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctgctggccAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCATAGCGCTGCCCATAAAAACCGGCAATTGCCTCACGCAGTGCCGGCAGACCGCGTGCGGCGGTGTAGCGAGTGTGCCCTGCGGCCAG > NC_002947/5331289‑5331437 GGTCTGCCGGCACTGCGTGAGGCAATTGCCGGTTTTTATGGGCAGCGCTATGGCCTGAACATCGACCCGGAACGCATCCTTATTACCCCCGGTGGCTCCGGCGCGCTGCTGCTGGCCAGCAGCCTGCTGGTGGACCCGGGCAAGCACTGG < 2:1118827/150‑1 CCGGCACTGCGTGAGGCAATTGCCGGTTTTTATGGGCAGCGCTATGGCCTGAACATCGACCCGGAACGCATCCTTATTACCCCCGGTGGCTCCGGCGCGCTGCTGCTGGCCAGCAGCCTGCTGGTGGACCCGGGCAAGCACTGGCTGCTG < 2:14819/150‑1 GGCACTGCGTGAGGCAATTGCCGGTTTTTATGGGCAGCGCTATGGCCTGAACATCGACCCGGAACGCATCCTTATTACCCCCGGTGGCTCCGGCGCGCTGCTGCTGGCCAGCAGCCTGCTGGTGGACCCGGGCAAGCACTGGCTG < 1:496602/145‑1 GGCACTGCGTGAGGCAATTGCCGGTTTTTATGGGCAGCGCTATGGCCTGAACATCGACCCGGAACGCATCCTTATTACCCCCGGTGGCTCCGGCGCGCTGCTGCTGGCCAGCAGCCTGCTGGTGGACCCGGGCAAGCACTGGCTG > 2:496602/1‑145 CCAGCAGCCTGCTGGTGGACCCGGGCAAGCACTGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCATAGCGCTGCCCATAAAAACCGGCAATTGCCTCACGCAGTGCCG > 1:1158520/1‑150 AGCCTGCTGGTGGACCCGGGCAAGCACTGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCATAGCGCTGCCCATAAAAACCGGCAATTGC < 1:278796/131‑1 AGCCTGCTGGTGGACCCGGGCAAGCACTGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCATAGCGCTGCCCATAAAAACCGGCAATTGC > 2:278796/1‑131 GGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCATAGCAGTCACGATAAAAACAGGCAATTGCCTCACGCAGTGCCGGCAGACCGCGTGCGGCGGTGTAGCGAGTGTGCC > 1:20992/1‑150 TGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCATAGCGCTGCCCATAAAAACCGGCAATTGGCTCACGCAGTGCCGGCAGACCGCGTGCGGCGGTGTAGCGAGTGTGCCCTG > 2:638621/1‑150 TGGCCAGCAGCAGCGCGCCGGAGACCGCCGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCATAGCGCTGCCCATAAAAACCGGCAATTGCCTCACGCAGTGCCGGCAGACCGCGTGCGGCGGTGTAGCGAGTGTGCCCTGCGG < 1:907192/150‑1 CAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCATAGCGCTGCCCATAAAAACCGGCAATTGCCTCACGCAGTGCCGGCAGACCGCGTGCGGCGGTGTAGCGAGTGTGCCCTGCGGCCAG > 2:1087034/1‑150 GGTCTGCCGGCACTGCGTGAGGCAATTGCCGGTTTTTATGGGCAGCGCTATGGCCTGAACATCGACCCGGAACGCATCCTTATTACCCCCGGTGGCTCCGGCGCGCTGCTGCTGGCCAGCAGCCTGCTGGTGGACCCGGGCAAGCACTGGCTGCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5331401‑5331243‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctgctggccAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCATAGCGCTGCCCATAAAAACCGGCAATTGCCTCACGCAGTGCCGGCAGACCGCGTGCGGCGGTGTAGCGAGTGTGCCCTGCGGCCAG > NC_002947/5331289‑5331437 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |