New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5331243 =	51 (1.130)	3 (0.070)	3/226	NT	6.8%	coding (366/1173 nt)	PP_4692	aspartate/tyrosine/aromatic aminotransferase
	?	NC_002947	5331289 =	36 (0.880)					coding (320/1173 nt)	PP_4692	aspartate/tyrosine/aromatic aminotransferase

GCTGATAGTTCACATCCGGGCCCACCGGTACCAATTGGGCCCCGCCCTCGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCATAGCGCTGCCCATAAAAACCGGCAATTGCCTCACGCAGTGCCGGCAGACCGCGTGCGGCGGTGTAGCGAGTGTGCCCTGCGGCCAG  >  NC_002947/5331152‑5331437                                                                                                                                          |                                                                                                                                                     gCTGATAGTTCACATCCGGGCCCACCGGTACCAATTGGGCCCCGCCCTCGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAgcgcgc                                                                                                                                          >  1:1135412/1‑150 (MQ=255)               tCCGGGCCCACCGGTACCAATTGGGCCCCCCCCTCGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGACCGGCCAGCAGCCAGTGCTTGCCCGGGGCCACCAGCAGGCTGCTGGCCAGCAGCCGCGCGCCGGAGCCGCCgggg                                                                                                                            >  2:457007/1‑150 (MQ=255)                 cGGGCCCACCGGTACCAATTGGGCCCCGCCCTCGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGt                                                                                                                          <  2:241798/150‑1 (MQ=255)                            gTACCAATTGGGCCCCGCCCTCGACCAGGCGCAGGAAGTGGCGATTGCATGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCca                                                                                                                                                      <  1:948799/111‑1 (MQ=255)                            gTACCAATTGGGCCCCGCCCTCGACCAGGCGCAGGAAGTGGCGATTGCATGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCca                                                                                                                                                      >  2:948799/1‑111 (MQ=255)                                 aaTTGGGCCCCGCCCTCGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTcc                                                                                                          >  1:58839/1‑150 (MQ=255)                                     gggCCCCGCCCTCGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGt                                                                                                      <  1:83315/150‑1 (MQ=255)                                          ccGCCCTCGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATg                                                                                                 >  1:1190207/1‑150 (MQ=255)                                          ccGCCCTCGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATg                                                                                                 >  1:708678/1‑150 (MQ=255)                                          ccGCCCTCGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCACCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATg                                                                                                 <  1:821503/150‑1 (MQ=255)                                           cGCCCTCGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGt                                                                                                >  2:397409/1‑150 (MQ=255)                                              ccTCGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCa                                                                                             <  2:1141157/150‑1 (MQ=255)                                               cTCGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAg                                                                                            <  2:1190207/150‑1 (MQ=255)                                               cTCGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAg                                                                                            <  1:857800/150‑1 (MQ=255)                                                 cGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGc                                                                                          <  2:708678/150‑1 (MQ=255)                                                    ccAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCAt                                                                                       >  2:229659/1‑150 (MQ=255)                                                     cAGGCGCAGGAAGTGGCGATTGCACGGGTGACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGCCCAtt                                                                                      >  2:907192/1‑149 (MQ=255)                                                     cAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCATa                                                                                      >  2:680566/1‑150 (MQ=255)                                                          gcAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCGGGGTAGATGTTCAGGCCATAGCGCt                                                                                 >  2:862466/1‑150 (MQ=255)                                                            aGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTATTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCATAGCGCTGc                                                                               >  1:1208202/1‑150 (MQ=255)                                                              gAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGTTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCgg                                                                                                        >  1:85737/1‑123 (MQ=255)                                                              gAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCgg                                                                                                        <  2:85737/123‑1 (MQ=255)                                                                    gCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCgg                                                                                                        >  1:1194025/1‑117 (MQ=255)                                                                    gCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCgg                                                                                                        <  2:1194025/117‑1 (MQ=255)                                                                        ttGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCATAGCGCTGCCCATAAAAACCg                                                                   <  2:58839/150‑1 (MQ=255)                                                                              gggTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCATAGCGCTGCCCATAAAAACCGGCactg                                                             >  1:101715/1‑147 (MQ=255)                                                                              gggTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCATAGCGCTGCCCATAAAAACCGGCAAtt                                                             <  1:680566/150‑1 (MQ=255)                                                                              gggTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCATAGCGCTGCCCATAAAAACCGGCAAtt                                                             >  1:738794/1‑150 (MQ=255)                                                                               ggTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTATTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCATAGCGCTGCCCATAAAAACCGGCAATTg                                                            <  2:1208202/150‑1 (MQ=255)                                                                                 tAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCATAGCGCTGCCCATAAAAACCGGCAATTGcc                                                          >  1:1003314/1‑150 (MQ=255)                                                                                  aaCCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCATAGCGCTGCCCATAAAAACCGGCAATTGCCt                                                         <  1:397409/150‑1 (MQ=255)                                                                                     ccGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGGAATAAGGGTGCGTTCCGGGTCGATGTTCAGGCCATAGCGCTGCCCATAAAAACCGGCAATTGCCTCAc                                                      >  2:329408/1‑150 (MQ=255)                                                                                       ggATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCATATCGCTGCCCATAAAAACCGGCAATTGCCTCACGc                                                    >  2:667690/1‑150 (MQ=255)                                                                                              ccagcagcctgctggtggacccgggcaagcactggctgctggccAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCATAGCGCTGCCCATAAAAACCGGCAATTGCCTCACGCAGTGCCg                                             >  1:1158520‑M2/45‑150 (MQ=255)                                                                                               CAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCATAGCGCTGCCCATAAAAACCGGCAATTGCCTCACGCAGTGCCgg                                            <  2:14819‑M1/150‑1 (MQ=255)                                                                                                  CAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCATAGCGCTGCCCATAAAAACCGGCAATTGCCTCACGCAGTGcc                                              >  2:496602‑M1/1‑145 (MQ=255)                                                                                                  CAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCATAGCGCTGCCCATAAAAACCGGCAATTGCCTCACGCAGTGcc                                              <  1:496602‑M1/145‑1 (MQ=255)                                                                                                   agcctgctggtggacccgggcaagcactggctgctggccAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCATAGCGCTGCCCATAAAAACCGGCAATTGc                                                           >  2:278796‑M2/40‑131 (MQ=255)                                                                                                   agcctgctggtggacccgggcaagcactggctgctggccAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCATAGCGCTGCCCATAAAAACCGGCAATTGc                                                           <  1:278796‑M2/92‑1 (MQ=255)                                                                                                     CCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCATAGCGCTGCCCATAAAAACCGGCAATTGCCTCACGCAGTGCCGGCAGAcc                                      <  2:1118827‑M1/150‑1 (MQ=255)                                                                                                              gCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCATAGCGCTGCCCACAAAAACCGGCAATTGCCTCACGCAGTGCCGGCAGACCGCGTgcggc                             >  1:955240/1‑150 (MQ=255)                                                                                                                 cGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTTGAGGTTCAGGCCATAGCGCTGCCCATAAAAACCGGCAATTGCCTCACGCAGTGCCGGCAGACCGCGTGCGGCGgt                          <  1:457007/150‑1 (MQ=255)                                                                                                                 cGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCATAGCGCTGCCCATAAAAACCGGCAATTGCCTCACGCAGTGCCGGCAGACCGCGTGCGGCGgt                          <  2:1135412/150‑1 (MQ=255)                                                                                                                        accaGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCATAGCGCTGCCCATAAAAACCGGCAATTGCCTCACGCAGTGCCGGCAGACCGCGTGCGGCGGTGTAGCGa                   <  1:229659/150‑1 (MQ=255)                                                                                                                        accaGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCATAGCGCTGCCCATAAAAACCGGCAATTGCCTCACGCAGTGCCGGCAGACCGCGTGCGGCGGTGTAGCGa                   >  2:764488/1‑150 (MQ=255)                                                                                                                          cagcagGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCATAGCGCTGCCCATAAAAACCGGCAATTGCCTCACGCAGTGCCGGCa                                          <  2:996023/125‑1 (MQ=255)                                                                                                                          cagcagGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCATAGCGCTGCCCATAAAAACCGGCAATTGCCTCACGCAGTGCCGGCa                                          >  1:996023/1‑125 (MQ=255)                                                                                                                             cagGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCATAGCGCTGCCCATAAAAACCGGCAATTGCCTCACGCAGTGCCGGCAGACCGCGTGCGGCGgt                          <  2:712392/138‑1 (MQ=255)                                                                                                                             cagGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCATAGCGCTGCCCATAAAAACCGGCAATTGCCTCACGCAGTGCCGGCAGACCGCGTGCGGCGgt                          >  1:712392/1‑138 (MQ=255)                                                                                                                               ggctgctggccAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCATAGCAGTCACGATAAAAACAGGCAATTGCCTCACGCAGTGCCGGCAGACCGCGTGCGGCGGTGTAGCGAGTGTGcc            >  1:20992‑M2/12‑150 (MQ=255)                                                                                                                                  tgctggccAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCATAGCGCTGCCCATAAAAACCGGCAATTGGCTCACGCAGTGCCGGCAGACCGCGTGCGGCGGTGTAGCGAGTGTGCCCTg         >  2:638621‑M2/9‑150 (MQ=255)                                                                                                                                     tggccAGCAGCAGCGCGCCGGAGACCGCCGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCATAGCGCTGCCCATAAAAACCGGCAATTGCCTCACGCAGTGCCGGCAGACCGCGTGCGGCGGTGTAGCGAGTGTGCCCTGCgg      <  1:907192‑M2/145‑1 (MQ=255)                                                                                                                                         cAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCATAGCGCTGCCCATAAAAACCGGCAATTGCCTCACGCAGTGCCGGCAGACCGCGTGCGGCGGTGTAGCGAGTGTGCCCTGCGGCCAg  >  2:1087034‑M2/2‑150 (MQ=255)                                                                                                                                          |                                                                                                                                                     GCTGATAGTTCACATCCGGGCCCACCGGTACCAATTGGGCCCCGCCCTCGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCATAGCGCTGCCCATAAAAACCGGCAATTGCCTCACGCAGTGCCGGCAGACCGCGTGCGGCGGTGTAGCGAGTGTGCCCTGCGGCCAG  >  NC_002947/5331152‑5331437

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.