New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5331243 =	51 (1.130)	3 (0.070)	3/226	NT	6.8%	coding (366/1173 nt)	PP_4692	aspartate/tyrosine/aromatic aminotransferase
	?	NC_002947	5331289 =	36 (0.880)					coding (320/1173 nt)	PP_4692	aspartate/tyrosine/aromatic aminotransferase

GCGACCAGGGCACCGACGGTGTCCTTGTCCCAGTAGCGCTCAACCAGGTCGGCAGTCAGCTGATAGTTCACATCCGGGCCCACCGGTACCAATTGGGCCCCGCCCTCGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCATAGCGCTGCCCATAAAAACCGGCAATTGCCTCACGC  >  NC_002947/5331094‑5331387                                                                                                                                                      |                                                                                                                                                 ctggccgcagggcacactcgctacaccgccgcacgcggtctgccggcactgcgtgaggcaattgccggtttttatgggcagcgctatggcctgaacatcgacccggaacgcatccttattacccccggtggctccggcgcgctgctgctg                                                                                                                                                  >  2:1087034‑M1/150‑150 (MQ=255)     ccgcagggcacactcgctacaccgccgcacgcggtctgccggcactgcgtgaggcaattgccggtttttatgggcagcgctatggcctgaacatcgacccggaacgcatccttattaccccggcggtctccggcgcgctgctgctGGCca                                                                                                                                              <  1:907192‑M1/5‑1 (MQ=255)        cagggcacactcgctacaccgccgcacgcggtctgccggcactgcgtgagccaattgccggtttttatgggcagcgctatggcctgaacatcgacccggaacgcatccttattacccccggtggctccggcgcgctgctgctGGCcagca                                                                                                                                           >  2:638621‑M1/143‑150 (MQ=255)          gCACCGACGGTGTCCTTGTCCCAGTAGCGCTCAACCAGGTCGGCAGTCAGCTGATAGTTCGCATCCGGGCCCACCGGTACCAATTGGGCCCCGCCCTCGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCagcagc                                                                                                                                         <  1:59533/150‑1 (MQ=255)          gCACCGACGGTGTCCTTGTCCCAGTAGCGCTCAACCAGGTCGGCAGTCAGCTGATAGTTCACATCCGGGCCCACCGGTACCAATTGGGCCCCGCCCTCGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCagcagc                                                                                                                                         <  2:418877/150‑1 (MQ=255)           ggcacactcgctacaccgccgcacgcggtctgccggcactgcgtgaggcaattgcctgtttttatcgtgactgctatggcctgaacatcgacccggaacgcatccttattacccccggtggctccggcgcgctgctgctGGCCAGCAGcc                                                                                                                                        >  1:20992‑M1/140‑150 (MQ=255)                aCGGTGTCCTTGTCCCAGTAGCGCTCAACCAGGTCGGCAGTCAGCTGATAGTTCACATCCGGGCCCACCGGTACCAATTGGGCCCCGCCCTCGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGc                                                                                                                                   <  1:214010/150‑1 (MQ=255)                        cTTGTCCCAGTAGCGCTCAACCAGGTCGGCAGTCAGCTGATAGTTCACATCCGGGCCCACCGGTACCAATTGGGCCCCGCCCTCGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCgg                                                                                                                           >  1:459281/1‑150 (MQ=255)                         ttGTCCCAGTAGCGCTCAACCAGGTCGGCAGTCAGCTGATAGTTCACATCCGGGCCCACCGGTACCAATTGGGCCCCGCCCTCGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCggg                                                                                                                          <  2:459281/150‑1 (MQ=255)                              ccAGTAGCGCTCAACCAGGTCGGCAGTCAGCTGATAGTTCACATCCGGGCCCACCGGTACCAATTGGGCCCCGCCCTCGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTccac                                                                                                                     >  2:33144/1‑150 (MQ=255)                                    gcgcTCAACCAGGTCGGCAGTCAGCTGATAGTTCACATCCGGGCCCACCGGTACCAATTGGGCCCCGCCCTCGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACcagcag                                                                                                               >  2:857800/1‑150 (MQ=255)                                      gcTCAACCAGGTCGGCAGTCAGCTGATAGTTCACATCCGGGCCCACCGGTACCAATTGGGCCCCGCCCTCGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGgc                                                                                                             >  1:436745/1‑150 (MQ=255)                                          aaCCAGGTCGGCAGTCAGCTGATAGTTCACATCCGGGCCCACCGGTACCAATTGGGCCCCGCCCTCGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGgctgct                                                                                                         >  2:178648/1‑150 (MQ=255)                                           aCCAGGTCGGCAGTCAGCTGATAGTTCACATCCGGGCCCACCGGTACCAATTGGGCCCCGCCCTCGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGctgctg                                                                                                        <  1:178648/150‑1 (MQ=255)                                            cggcactgcgtgaggcaattgccggtttttatgggcagcgctatggcctgaacatcgacccggaacgcatccttattacccccggtggctccggcgcgctgctgctGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTgg                                                                                                       >  1:1158520‑M1/107‑150 (MQ=255)                                             cAGGTCGGCAGTCAGCTGATAGTTCACATCCGGGCCCACCGGTACCAATTGGGCCCCGCCCTCGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGc                                                                                                      <  1:33144/150‑1 (MQ=255)                                                          gcaattgccggtttttatgggcagcgctatggcctgaacatcgacccggaacgcatccttattacccccggtggctccggcgcgctgctgctGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGgct                                                                                                            <  1:278796‑M1/39‑1 (MQ=255)                                                          gcaattgccggtttttatgggcagcgctatggcctgaacatcgacccggaacgcatccttattacccccggtggctccggcgcgctgctgctGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGgct                                                                                                            >  2:278796‑M1/93‑131 (MQ=255)                                                           gCTGATAGTTCACATCCGGGCCCACCGGTACCAATTGGGCCCCGCCCTCGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAgcgcgc                                                                                        >  1:1135412/1‑150 (MQ=255)                                                            cTGATAGTTCACATCCGGGCCCACCGGTACCAATTGGGCCCCGCCCTCGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCgg                                                                                                                           >  1:996634/1‑114 (MQ=255)                                                            cTGATAGTTCACATCCGGGCCCACCGGTACCAATTGGGCCCCGCCCTCGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCgg                                                                                                                           <  2:996634/114‑1 (MQ=255)                                                             tGATAGTTCACATCCGGGCCCACCGGTACCAATTGGGCCCCGCCCTCGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCagcagc                                                                                                                                         >  1:751876/1‑99 (MQ=255)                                                             tGATAGTTCACATCCGGGCCCACCGGTACCAATTGGGCCCCGCCCTCGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCagcagc                                                                                                                                         <  2:751876/99‑1 (MQ=255)                                                                    tCACATCCGGGCCCACCGGTACCAATTGGGCCCCGCCCTCGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAgg                                                                                                              >  1:244365/1‑119 (MQ=255)                                                                    tCACATCCGGGCCCACCGGTACCAATTGGGCCCCGCCCTCGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAgg                                                                                                              <  2:244365/119‑1 (MQ=255)                                                                         tCCGGGCCCACCGGTACCAATTGGGCCCCCCCCTCGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGACCGGCCAGCAGCCAGTGCTTGCCCGGGGCCACCAGCAGGCTGCTGGCCAGCAGCCGCGCGCCGGAGCCGCCgggg                                                                          >  2:457007/1‑150 (MQ=255)                                                                           cGGGCCCACCGGTACCAATTGGGCCCCGCCCTCGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGt                                                                        <  2:241798/150‑1 (MQ=255)                                                                                ccACCGGTACCAATTGGGCCCCGCCCTCGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTccac                                                                                                                     <  1:124310/100‑1 (MQ=255)                                                                                ccACCGGTACCAATTGGGCCCCGCCCTCGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTccac                                                                                                                     >  2:124310/1‑100 (MQ=255)                                                                                      gTACCAATTGGGCCCCGCCCTCGACCAGGCGCAGGAAGTGGCGATTGCATGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCca                                                                                                    <  1:948799/111‑1 (MQ=255)                                                                                      gTACCAATTGGGCCCCGCCCTCGACCAGGCGCAGGAAGTGGCGATTGCATGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCca                                                                                                    >  2:948799/1‑111 (MQ=255)                                                                                           aaTTGGGCCCCGCCCTCGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTcc                                                        >  1:58839/1‑150 (MQ=255)                                                                                               gggCCCCGCCCTCGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGt                                                    <  1:83315/150‑1 (MQ=255)                                                                                                    ccGCCCTCGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATg                                               >  1:708678/1‑150 (MQ=255)                                                                                                    ccGCCCTCGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATg                                               >  1:1190207/1‑150 (MQ=255)                                                                                                    ccGCCCTCGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCACCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATg                                               <  1:821503/150‑1 (MQ=255)                                                                                                     cGCCCTCGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGt                                              >  2:397409/1‑150 (MQ=255)                                                                                                        ccTCGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCa                                           <  2:1141157/150‑1 (MQ=255)                                                                                                         cTCGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAg                                          <  2:1190207/150‑1 (MQ=255)                                                                                                         cTCGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAg                                          <  1:857800/150‑1 (MQ=255)                                                                                                           cGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGc                                        <  2:708678/150‑1 (MQ=255)                                                                                                              ccAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCAt                                     >  2:229659/1‑150 (MQ=255)                                                                                                               cAGGCGCAGGAAGTGGCGATTGCACGGGTGACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGCCCAtt                                    >  2:907192/1‑149 (MQ=255)                                                                                                               cAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCATa                                    >  2:680566/1‑150 (MQ=255)                                                                                                                    gcAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCGGGGTAGATGTTCAGGCCATAGCGCt                               >  2:862466/1‑150 (MQ=255)                                                                                                                      aGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTATTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCATAGCGCTGc                             >  1:1208202/1‑150 (MQ=255)                                                                                                                        gAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGTTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCgg                                                      >  1:85737/1‑123 (MQ=255)                                                                                                                        gAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCgg                                                      <  2:85737/123‑1 (MQ=255)                                                                                                                              gCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCgg                                                      >  1:1194025/1‑117 (MQ=255)                                                                                                                              gCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCgg                                                      <  2:1194025/117‑1 (MQ=255)                                                                                                                                  ttGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCATAGCGCTGCCCATAAAAACCg                 <  2:58839/150‑1 (MQ=255)                                                                                                                                        gggTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCATAGCGCTGCCCATAAAAACCGGCactg           >  1:101715/1‑147 (MQ=255)                                                                                                                                        gggTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCATAGCGCTGCCCATAAAAACCGGCAAtt           <  1:680566/150‑1 (MQ=255)                                                                                                                                        gggTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCATAGCGCTGCCCATAAAAACCGGCAAtt           >  1:738794/1‑150 (MQ=255)                                                                                                                                         ggTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTATTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCATAGCGCTGCCCATAAAAACCGGCAATTg          <  2:1208202/150‑1 (MQ=255)                                                                                                                                           tAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCATAGCGCTGCCCATAAAAACCGGCAATTGcc        >  1:1003314/1‑150 (MQ=255)                                                                                                                                            aaCCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCATAGCGCTGCCCATAAAAACCGGCAATTGCCt       <  1:397409/150‑1 (MQ=255)                                                                                                                                               ccGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGGAATAAGGGTGCGTTCCGGGTCGATGTTCAGGCCATAGCGCTGCCCATAAAAACCGGCAATTGCCTCAc    >  2:329408/1‑150 (MQ=255)                                                                                                                                                 ggATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCATATCGCTGCCCATAAAAACCGGCAATTGCCTCACGc  >  2:667690/1‑150 (MQ=255)                                                                                                                                                      |                                                                                                                                                 GCGACCAGGGCACCGACGGTGTCCTTGTCCCAGTAGCGCTCAACCAGGTCGGCAGTCAGCTGATAGTTCACATCCGGGCCCACCGGTACCAATTGGGCCCCGCCCTCGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCAGTGCTTGCCCGGGTCCACCAGCAGGCTGCTGGCCAGCAGCAGCGCGCCGGAGCCACCGGGGGTAATAAGGATGCGTTCCGGGTCGATGTTCAGGCCATAGCGCTGCCCATAAAAACCGGCAATTGCCTCACGC  >  NC_002947/5331094‑5331387

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.