New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 545092240 (0.890)4 (0.090) 4/234 NT 8.7% coding (253/840 nt) corC Co(2+)/Mg(2+)efflux heat shock protein
?NC_002947 = 5450949 46 (1.080)coding (280/840 nt) corC Co(2+)/Mg(2+)efflux heat shock protein

GCTGCGCGAAGCCCATCAGAACAAATTGCTGGACAGCGAAGCGCTGACCATCGTCGAAGGCGCCATTCAGGTCGCCGACCTGCAAGTTCGCGACATCATGGTGCCGCGTTCGCAGATGAACAGCATCAAGGCCGGCCAGTCGCCTCGCGAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5450771‑5450922
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgagtGCGCGGCGTCGATCACCGCCGGCAGGAACTCGCGAGGCGACTGGCCGGCCTTGATGCTGTTCATCTGCGAACGCGGCACCATGATGTCGCGAACTTGCAGGTCGGCGACCTGAATGGCGCCTTCGACGATGGTCAGCGCTTCGCTG  <  NC_002947/5450949‑5450804
                                                                                                                                                                                                                                                                                                          
GCTGCGCGAAGCCCATCAGAACAAATTGCTGGACAGCGAAGCGCTGACCATCGTCGAAGGCGCCATTCAGGTCGCCGACCTGCAAGTTCGCGACATCATGGTGCCGCGTTCGCAGATGAACAGCATCAAGGCCGGCCAGTCGCCTCGCGA                                                                                                                                                      <  1:1048986/150‑1
  TGCGCGAAGCCCATCAGAACAAATTGCTGGACAGCGAAGCGCTGACCATCGTCGAAGGCGCCATTCAGGTCGCCGACCTGCAAGTTCGCGACATCATGGTGCCGCGTTCGCAGATGAACAGCATCAAGGCCGGCCAGTCGCCTCGCGAGT                                                                                                                                                    >  1:414917/1‑150
                                      AAGCGCTGACCATCGTCGAAGGCGCCATTCAGGTCGCCGACCTGTATGCTTGCGACATCATGGTGCCGCGTTCGCAGATGAACAGCATCAAGGCCGGCCAGTCGCCTCGCGAGTGCGCGGCGTCGATCACCGCCGGCAGGAACTCGCGAG                                                                                                                <  1:734123/150‑1
                                        GCGCTGACCATCGTCGAAGGCGCCATTCAGGTCGCCGACCTGCAAGTTCGCGACATCATGGTGCCGCGTTCGCAGATGAACAGCATCAAGGCCGGCCAGTCGCCTCGCGAGTGCGCGGCGTCGATCACCGCCGGCAGGAACTCGCGAGGC                                                                                                              <  2:1160605/150‑1
                                                                            GACCTGCAAGTTCGCGACATCATGGTGCCGCGTTCGCAGATGAACAGCATCAAGGCCGGCCAGTCGCCTCGCGAGTGCGCGGCGTCGATCACCGCCGGCAGGAACTCGCGA                                                                                                                 >  1:1193866/1‑111
                                                                            GACCTGCAAGTTCGCGACATCATGGTGCCGCGTTCGCAGATGAACAGCATCAAGGCCGGCCAGTCGCCTCGCGAGTGCGCGGCGTCGATCACCGCCGGCAGGAACTCGCGA                                                                                                                 <  2:1193866/111‑1
                                                                                                                                                  GCGAGTGCGCGGCGTCGATCACCGCCGGCAGGAACTCGCGAGGCGACTGGCCGGCCTTGATGCTGTTCATCTGCGAACGCGGCACCATGATGTCGCGAACTTG                                                   <  1:155611/103‑1
                                                                                                                                                  GCGAGTGCGCGGCGTCGATCACCGCCGGCAGGAACTCGCGAGGCGACTGGCCGGCCTTGATGCTGTTCATCTGCGAACGCGGCACCATGATGTCGCGAACTTG                                                   >  2:155611/1‑103
                                                                                                                                                    GAGTGCTCGGCGTCGATCACCGCCGGCAGGAACTCGCGAGGCGACTGGCCGGCCTTGATGCTGTTCATCTGCGAACGCGGCACCATGATGTCGCGAACTTGCAGGTCGGCGACCTGAATGGCGCCTTCGACGATGGTCAGCGCTTCGCTG  <  1:583170/150‑1
                                                                                                                                                                                                                                                                                                          
GCTGCGCGAAGCCCATCAGAACAAATTGCTGGACAGCGAAGCGCTGACCATCGTCGAAGGCGCCATTCAGGTCGCCGACCTGCAAGTTCGCGACATCATGGTGCCGCGTTCGCAGATGAACAGCATCAAGGCCGGCCAGTCGCCTCGCGAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5450771‑5450922
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgagtGCGCGGCGTCGATCACCGCCGGCAGGAACTCGCGAGGCGACTGGCCGGCCTTGATGCTGTTCATCTGCGAACGCGGCACCATGATGTCGCGAACTTGCAGGTCGGCGACCTGAATGGCGCCTTCGACGATGGTCAGCGCTTCGCTG  <  NC_002947/5450949‑5450804

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.