| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5610694 | 64 (1.420) | 5 (0.120) | 9/232 | NT | 7.6% | coding (58/333 nt) | emrE | small multidrug resistance protein |
| ? | NC_002947 | = 5610700 | 61 (1.440) | coding (64/333 nt) | emrE | small multidrug resistance protein | |||||
ACTGCTCGGCCATCAACCTATCTCCCATATCGATAGGTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5610538‑5610694‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccgcctTCATCGAGGCGGTGGCGATGACTTCGGCGCAGATGGCAATGGCGAGGTAGGTATAGGCATTCATGGCAGGATCCTCCGTTACTGAGCGGGCATTCTAGACGTTGCCTGGATGGGGTAAAGTCATTACCTATCGATATGGGAGA < NC_002947/5610700‑5610558 ACTGCTCGGCCATCAACCTATCTCCCATATCGATAGGTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCC > 1:1137217/1‑150ACTGCTCGGCCATCAACCTATCTCCCATATCGATAGGTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCC > 2:750219/1‑150ACTGCTCGGCCATCAACCTATCTCCCATATCGATAGGTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCC > 2:1105883/1‑150 GCTCGGCCATCAACCTATCTCCCATATCGATAGGTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACC > 1:20604/1‑150 CTCGGCCATCAACCTATCTCCCATATCGATAGGTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCG > 1:175457/1‑150 CTCGGCCATCAACCTATCTCCCATATCGATAGGTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCG > 2:363095/1‑150 TCGGCCATCAACCTATCTCCCATATCGATAGGTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGC > 2:66000/1‑150 CTCCCATATCGATAGGTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTTCATCGAGGCGGTG < 1:750219/150‑1 CTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTTCATCGAGGCGG > 1:1185426/1‑75 CTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTTCATCGAGGCGG < 2:1185426/75‑1 TACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTTCATCGAGGCGGTGG > 2:868978/1‑58 TACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTTCATCGAGGCGGTGG < 1:868978/58‑1 TCGCCACCGCCTCGATGAAGGCGGTGGCGATGACTTCGGCGCAGATGGCAATGGCGAGG > 2:1037805/1‑59 TCGCCACCGCCTCGATGAAGGCGGTGGCGATGACTTCGGCGCAGATGGCAATGGCGAGG < 1:1037805/59‑1 GCCACCGCCTCGATGAAGGCGGTGGCGATGACTTCGGCGCAGATGGCAATGGCGAGGTAGGTATAG > 2:443885/1‑66 GCCACCGCCTCGATGAAGGCGGTGGCGATGACTTCGGCGCAGATGGCAATGGCGAGGTAGGTATAG < 1:443885/66‑1 ACCGCCTTCATCGAGGCGGTGGCGATGACTTCGGCGCAGATGGCAATGGCGAGGTAGGTATAGGCATTCATGGCAGGATCCTCCGTTACTGAGCGGGCATTCTAGACGTTGCCTGGATGGGGTAAAGTCATTACCTATCGATATGGGAGA > 1:807004/1‑150 ACTGCTCGGCCATCAACCTATCTCCCATATCGATAGGTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5610538‑5610694‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccgcctTCATCGAGGCGGTGGCGATGACTTCGGCGCAGATGGCAATGGCGAGGTAGGTATAGGCATTCATGGCAGGATCCTCCGTTACTGAGCGGGCATTCTAGACGTTGCCTGGATGGGGTAAAGTCATTACCTATCGATATGGGAGA < NC_002947/5610700‑5610558 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |