New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5610694	64 (1.420)	5 (0.120)	9/232	NT	7.6%	coding (58/333 nt)	emrE	small multidrug resistance protein
	?	NC_002947	= 5610700	61 (1.440)					coding (64/333 nt)	emrE	small multidrug resistance protein

GCCATCAACCTATCTCCCATATCGATAGGTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGC‑CATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATCTGGTCGGGGCTGGGGATTG  >  NC_002947/5610546‑5610841                                                                                                                                                      |                                                                                                                                                    gCCATCAACCTATCTCCCATATCGATAGGTAATGACTTTACCCTATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGC‑CATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTc                                                                                                                                                    >  2:875989/1‑150 (MQ=255)   cATCAACCTATCTCCCATATCGATAGGTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGC‑CATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTc                                                                                                                                                    >  1:400155/1‑148 (MQ=255)   cATCAACCTATCTCCCATATCGATAGGTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGC‑CATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTc                                                                                                                                                    <  2:400155/148‑1 (MQ=255)    aTCAACCTATCTCCCATATCGATAGGTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGC‑CATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGAt                                                                                                                                                 <  2:20604/150‑1 (MQ=255)             tctcCCATATCGATAGGTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGC‑CATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAaggcggt                                                                                                                                        >  1:807004‑M2/1‑143 (MQ=255)              ctcCCATATCGATAGGTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGC‑CATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTtcatcgaggcggtg                                                                                                                                       <  1:750219‑M1/150‑15 (MQ=255)                   atatCGATAGGTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGC‑CATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAgg                                                                                                                                  >  2:210879/1‑150 (MQ=255)                    tatCGATAGGTCATGACTTGACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTCA‑GAAGGCGCAGGCGCATGAATGCCTATACCTACCTCGCCCTTGACATATGCGTCGACGGCGTCGCCACCGCCTCGATGAAGGCGGTGAAAGGc                                                                                                                                 <  1:875989/150‑1 (MQ=255)                             gTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGC‑CATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACg                                                                                                                        >  1:28987/1‑150 (MQ=255)                                 tGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGC‑CATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGt                                                                                                                    <  1:125716/150‑1 (MQ=255)                                  gACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGC‑CATGAATTCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGaaa                                                                                                                                    >  1:1009075/1‑133 (MQ=255)                                  gACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGC‑CATGAATTCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGaaa                                                                                                                                    <  2:1009075/133‑1 (MQ=255)                                          cccATCCAGGCAACGTCTAGAATGCCCTCTCAGTAACGGAGGATCCTGC‑CATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGCTGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCActgc                                                                                                           >  1:1118963/1‑150 (MQ=255)                                                cAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGC‑CATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCAGCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCActgctgcggg                                                                                                     >  1:260579/1‑147 (MQ=255)                                                  ggCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGC‑CATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGAtg                                                                                                   <  1:363095/150‑1 (MQ=255)                                                   gCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGC‑CATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGAtgg                                                                                                  <  1:1077729/150‑1 (MQ=255)                                                        gTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGC‑CATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGtt                                                                                             >  2:242001/1‑150 (MQ=255)                                                         tCTAGAATGCCCGCTCAGTAACGGAGGATCCTGC‑CATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTg                                                                                            >  1:492457/1‑150 (MQ=255)                                                          cTAGAATGCCCGCTCAGTAACGGAGGATCCTGC‑CATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTgg                                                                                           <  2:128543/150‑1 (MQ=255)                                                          cTAGAATGCCCGCTCAGTAACGGAGGATCCTGC‑CATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTgg                                                                                           >  1:803298/1‑150 (MQ=255)                                                               aTGCCCGCTCAGTAACGGAGGATCCTGC‑CATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGCAAAACCTAAGCACACCGTTGCCACTGCTGCTGATGGTGGTTGGCTATg                                                                                      <  2:1137217/150‑1 (MQ=255)                                                               aTGCCCGCTCAGTAACGGAGGATCCTGC‑CATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATCAAGGCGGTGAAAGGCCt                                                                                                                               <  2:617627/109‑1 (MQ=255)                                                               aTGCCCGCTCAGTAACGGAGGATCCTGC‑CATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATAAAGGCGGTGAAAGGCCt                                                                                                                               >  1:617627/1‑109 (MQ=255)                                                                   ccGCTCAGTAACGGAGGATCCTGC‑CATCAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAGGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGTCACTGCTGCTGATGGTGGTTGGCTATGGcct                                                                                  >  1:794102/1‑148 (MQ=255)                                                                    cGCTCAGTAACGGAGGATCCTGC‑CATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAg                                                                                                                                   >  1:885537/1‑100 (MQ=255)                                                                    cGCTCAGTAACGGAGGATCCTGC‑CATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAg                                                                                                                                   <  2:885537/100‑1 (MQ=255)                                                                           tAACGGAGGATCCTGC‑CATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGCCTATGGCATTGCGTTCt                                                                          <  2:1142073/150‑1 (MQ=255)                                                                           tAACGGAGGATCCTGC‑CATGAATGCCTATACCTACCTCGCCATTGCCACCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCt                                                                          <  2:1118963/150‑1 (MQ=255)                                                                             aCGGAGGATCCTGC‑CATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGa                                                                                                                             >  1:605245/1‑97 (MQ=255)                                                                             aCGGAGGATCCTGC‑CATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGa                                                                                                                             <  2:605245/97‑1 (MQ=255)                                                                             aCGGAGGATCCTGC‑CATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTg                                                                                                                  <  1:291613/108‑1 (MQ=255)                                                                             aCGGAGGATCCTGC‑CATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTg                                                                                                                  >  2:291613/1‑108 (MQ=255)                                                                                   gaTCCTGC‑CATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTg                                                                  >  1:1057070/1‑150 (MQ=255)                                                                                       cTGC‑CATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTtcatcgaggcgg                                                                                                                                         <  2:1185426‑M1/75‑13 (MQ=255)                                                                                       cTGC‑CATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTtcatcgaggcgg                                                                                                                                         >  1:1185426‑M1/1‑63 (MQ=255)                                                                                       cTGC‑CATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGGGAAAGGCCTGAGCACGCCGTTGCCACTGCAGCTGATGGTGGTTTGGTATGGCTTTGCGTTCTGGATGCTGACGc                                                              >  1:984451/1‑150 (MQ=255)                                                                                        tGC‑CATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGCTGCTGACGCt                                                             >  2:456306/1‑150 (MQ=255)                                                                                          c‑cATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCtgg                                                           <  1:1105883/150‑1 (MQ=255)                                                                                            cATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGTCGGtgtt                                                          >  2:991121/1‑148 (MQ=255)                                                                                            cATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCtggt                                                          <  2:1057070/150‑1 (MQ=255)                                                                                            cATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGAATCAGCTCCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCttgt                                                          <  1:991121/150‑1 (MQ=255)                                                                                             aTGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGt                                                                                                                    <  2:159543/91‑1 (MQ=255)                                                                                             aTGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGt                                                                                                                    >  1:159543/1‑91 (MQ=255)                                                                                             aTGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCtggtg                                                         <  2:803298/150‑1 (MQ=255)                                                                                              tGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACg                                                               <  2:552849/143‑1 (MQ=255)                                                                                              tGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACg                                                               >  1:552849/1‑143 (MQ=255)                                                                                                 aTGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGc                                                              >  1:972008/1‑141 (MQ=255)                                                                                                 aTGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGc                                                              <  2:972008/141‑1 (MQ=255)                                                                                                 aTGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTcc                                                     >  2:235321/1‑150 (MQ=255)                                                                                                    ccTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCgca                                                  <  1:235321/150‑1 (MQ=255)                                                                                                    ccTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCgca                                                  <  1:242001/150‑1 (MQ=255)                                                                                                     cTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTTCATCGaggcggtggc                                                                                                                                     >  2:443885‑M2/1‑56 (MQ=255)                                                                                                     cTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTTCATCGaggcggtggc                                                                                                                                     <  1:443885‑M2/66‑11 (MQ=255)                                                                                                     cTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATgg                                                                                     >  1:516543/1‑114 (MQ=255)                                                                                                     cTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATgg                                                                                     <  2:516543/114‑1 (MQ=255)                                                                                                     cTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCgcag                                                 >  2:707452/1‑150 (MQ=255)                                                                                                         acctacctCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCAtt                                             >  2:20524/1‑150 (MQ=255)                                                                                                           ctaccgCGCCGTTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGGGAAACGCCTGAGGACGCCGTTGCTACTGCGGCGGATGGTGGTTGGCTCTGGCATTGCGTTCTCGATGCTGACGTTGGGGGTCTTGAGCATTcc                                           >  2:504128/1‑150 (MQ=255)                                                                                                            tacctCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTtcatcgaggcggtgg                                                                                                                                      >  2:868978‑M1/1‑43 (MQ=255)                                                                                                            tacctCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTtcatcgaggcggtgg                                                                                                                                      <  1:868978‑M1/58‑16 (MQ=255)                                                                                                              cctCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTTCATCGaggcggtggcga                                                                                                                                   >  2:1037805‑M2/1‑47 (MQ=255)                                                                                                              cctCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTTCATCGaggcggtggcga                                                                                                                                   <  1:1037805‑M2/59‑13 (MQ=255)                                                                                                              cctCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGt                                        >  1:431573/1‑150 (MQ=255)                                                                                                               ctCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTg                                       <  1:66000/150‑1 (MQ=255)                                                                                                               ctCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTg                                       >  2:691775/1‑150 (MQ=255)                                                                                                               ctCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTg                                       >  1:108395/1‑150 (MQ=255)                                                                                                                tCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGa                                                                 <  2:976954/123‑1 (MQ=255)                                                                                                                tCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGa                                                                 >  1:976954/1‑123 (MQ=255)                                                                                                                  gCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTgggg                                    >  1:779895/1‑150 (MQ=255)                                                                                                                       tGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGc                               <  2:492457/150‑1 (MQ=255)                                                                                                                       ggCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGc                               <  2:151078/149‑1 (MQ=255)                                                                                                                       ggCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGc                               <  2:141815/149‑1 (MQ=255)                                                                                                                          cATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTa                            <  1:210879/150‑1 (MQ=255)                                                                                                                                 gcCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATc                     >  2:1089717/1‑150 (MQ=255)                                                                                                                                  ccGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATCt                    >  2:900350/1‑150 (MQ=255)                                                                                                                                   cGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATCTg                   >  1:235076/1‑150 (MQ=255)                                                                                                                                           tCGCCACCGCCTcgatgaaggcggtggcgatgacttcggcgcagatggcaatggcgagg                                                                                                      <  1:1037805‑M1/59‑48 (MQ=255)                                                                                                                                           tCGCCACCGCCTcgatgaaggcggtggcgatgacttcggcgcagatggcaatggcgagg                                                                                                      >  2:1037805‑M1/1‑12 (MQ=255)                                                                                                                                           tCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATCTGGTCGGGGc           >  2:78910/1‑150 (MQ=255)                                                                                                                                             gCCACCGCCTcgatgaaggcggtggcgatgacttcggcgcagatggcaatggcgaggtaggtatag                                                                                             >  2:443885‑M1/1‑10 (MQ=255)                                                                                                                                             gCCACCGCCTcgatgaaggcggtggcgatgacttcggcgcagatggcaatggcgaggtaggtatag                                                                                             <  1:443885‑M1/66‑57 (MQ=255)                                                                                                                                              ccACCGCCTCGATGAaggcggtggcgatgacttcggcgcagatggcaatggcgaggta                                                                                                    <  1:868978‑M2/58‑44 (MQ=255)                                                                                                                                              ccACCGCCTCGATGAaggcggtggcgatgacttcggcgcagatggcaatggcgaggta                                                                                                    >  2:868978‑M2/1‑15 (MQ=255)                                                                                                                                              ccACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATCTGGTCGGGGCTgg        <  2:431573/150‑1 (MQ=255)                                                                                                                                               cACCGCCTCGATGAaggcggtggcgatgacttcggcgcagatggcaatggcgaggtaggtataggcattcatggcaggatcctccgttactgagcgggcattctagacgttgcctggatggggtaaagtcattacctatcgatatgggag       <  1:750219‑M2/150‑137 (MQ=255)                                                                                                                                                aCCGCCTtcatcgaggcggtggcgatgacttcggcgcagatggcaatggcgaggtaggtataggcattcatggcaggatcctccgttactgagcgggcattctagacgttgcctggatggggtaaagtcattacctatcgatatgggaga      >  1:807004‑M1/1‑7 (MQ=255)                                                                                                                                                 ccGCCTCGATGAaggcggtggcgatgacttcggcgcagatggcaatggcgaggtaggtataggcattcatggcag                                                                                <  2:1185426‑M2/75‑64 (MQ=255)                                                                                                                                                 ccGCCTCGATGAaggcggtggcgatgacttcggcgcagatggcaatggcgaggtaggtataggcattcatggcag                                                                                >  1:1185426‑M2/1‑12 (MQ=255)                                                                                                                                                    ccTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGATGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATCTGGTCGGGGCTGGGGATtg  <  2:175457/150‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                    GCCATCAACCTATCTCCCATATCGATAGGTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGC‑CATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATCTGGTCGGGGCTGGGGATTG  >  NC_002947/5610546‑5610841

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.