New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 561069464 (1.420)5 (0.120) 9/232 NT 7.6% coding (58/333 nt) emrE small multidrug resistance protein
?NC_002947 = 5610700 61 (1.440)coding (64/333 nt) emrE small multidrug resistance protein

TCTCCCATATCGATAGGTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATCTGGTCGGGGCTGGGGATTGTGC  >  NC_002947/5610558‑5610844
                                                                                                                                               |                                                                                                                                                
tctcCCATATCGATAGGTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAaggcggt                                                                                                                                           >  1:807004‑M2/1‑143 (MQ=255)
      atatCGATAGGTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAgg                                                                                                                                     >  2:210879/1‑150 (MQ=255)
       tatCGATAGGTCATGACTTGACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTCAGAAGGCGCAGGCGCATGAATGCCTATACCTACCTCGCCCTTGACATATGCGTCGACGGCGTCGCCACCGCCTCGATGAAGGCGGTGAAAGGc                                                                                                                                    <  1:875989/150‑1 (MQ=255)
                gTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACg                                                                                                                           >  1:28987/1‑150 (MQ=255)
                    tGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGt                                                                                                                       <  1:125716/150‑1 (MQ=255)
                     gACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATTCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGaaa                                                                                                                                       >  1:1009075/1‑133 (MQ=255)
                     gACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATTCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGaaa                                                                                                                                       <  2:1009075/133‑1 (MQ=255)
                             cccATCCAGGCAACGTCTAGAATGCCCTCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGCTGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCActgc                                                                                                              >  1:1118963/1‑150 (MQ=255)
                                   cAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCAGCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCActgctgcggg                                                                                                        >  1:260579/1‑147 (MQ=255)
                                     ggCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGAtg                                                                                                      <  1:363095/150‑1 (MQ=255)
                                      gCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGAtgg                                                                                                     <  1:1077729/150‑1 (MQ=255)
                                           gTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGtt                                                                                                >  2:242001/1‑150 (MQ=255)
                                            tCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTg                                                                                               >  1:492457/1‑150 (MQ=255)
                                             cTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTgg                                                                                              >  1:803298/1‑150 (MQ=255)
                                             cTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTgg                                                                                              <  2:128543/150‑1 (MQ=255)
                                                  aTGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGCAAAACCTAAGCACACCGTTGCCACTGCTGCTGATGGTGGTTGGCTATg                                                                                         <  2:1137217/150‑1 (MQ=255)
                                                  aTGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATCAAGGCGGTGAAAGGCCt                                                                                                                                  <  2:617627/109‑1 (MQ=255)
                                                  aTGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATAAAGGCGGTGAAAGGCCt                                                                                                                                  >  1:617627/1‑109 (MQ=255)
                                                      ccGCTCAGTAACGGAGGATCCTGCCATCAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAGGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGTCACTGCTGCTGATGGTGGTTGGCTATGGcct                                                                                     >  1:794102/1‑148 (MQ=255)
                                                       cGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAg                                                                                                                                      >  1:885537/1‑100 (MQ=255)
                                                       cGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAg                                                                                                                                      <  2:885537/100‑1 (MQ=255)
                                                              tAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGCCTATGGCATTGCGTTCt                                                                             <  2:1142073/150‑1 (MQ=255)
                                                              tAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCACCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCt                                                                             <  2:1118963/150‑1 (MQ=255)
                                                                aCGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGa                                                                                                                                >  1:605245/1‑97 (MQ=255)
                                                                aCGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGa                                                                                                                                <  2:605245/97‑1 (MQ=255)
                                                                aCGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTg                                                                                                                     <  1:291613/108‑1 (MQ=255)
                                                                aCGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTg                                                                                                                     >  2:291613/1‑108 (MQ=255)
                                                                      gaTCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTg                                                                     >  1:1057070/1‑150 (MQ=255)
                                                                          cTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGGGAAAGGCCTGAGCACGCCGTTGCCACTGCAGCTGATGGTGGTTTGGTATGGCTTTGCGTTCTGGATGCTGACGc                                                                 >  1:984451/1‑150 (MQ=255)
                                                                           tGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGCTGCTGACGCt                                                                >  2:456306/1‑150 (MQ=255)
                                                                             ccATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCtgg                                                              <  1:1105883/150‑1 (MQ=255)
                                                                               cATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGTCGGtgtt                                                             >  2:991121/1‑148 (MQ=255)
                                                                               cATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCtggt                                                             <  2:1057070/150‑1 (MQ=255)
                                                                               cATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGAATCAGCTCCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCttgt                                                             <  1:991121/150‑1 (MQ=255)
                                                                                aTGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGt                                                                                                                       <  2:159543/91‑1 (MQ=255)
                                                                                aTGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGt                                                                                                                       >  1:159543/1‑91 (MQ=255)
                                                                                aTGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCtggtg                                                            <  2:803298/150‑1 (MQ=255)
                                                                                 tGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACg                                                                  >  1:552849/1‑143 (MQ=255)
                                                                                 tGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACg                                                                  <  2:552849/143‑1 (MQ=255)
                                                                                    aTGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGc                                                                 <  2:972008/141‑1 (MQ=255)
                                                                                    aTGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGc                                                                 >  1:972008/1‑141 (MQ=255)
                                                                                    aTGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTcc                                                        >  2:235321/1‑150 (MQ=255)
                                                                                       ccTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCgca                                                     <  1:235321/150‑1 (MQ=255)
                                                                                       ccTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCgca                                                     <  1:242001/150‑1 (MQ=255)
                                                                                        cTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTTCATCGaggcggtggc                                                                                                                                        <  1:443885‑M2/66‑11 (MQ=255)
                                                                                        cTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTTCATCGaggcggtggc                                                                                                                                        >  2:443885‑M2/1‑56 (MQ=255)
                                                                                        cTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATgg                                                                                        <  2:516543/114‑1 (MQ=255)
                                                                                        cTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATgg                                                                                        >  1:516543/1‑114 (MQ=255)
                                                                                        cTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCgcag                                                    >  2:707452/1‑150 (MQ=255)
                                                                                            acctacctCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCAtt                                                >  2:20524/1‑150 (MQ=255)
                                                                                              ctaccgCGCCGTTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGGGAAACGCCTGAGGACGCCGTTGCTACTGCGGCGGATGGTGGTTGGCTCTGGCATTGCGTTCTCGATGCTGACGTTGGGGGTCTTGAGCATTcc                                              >  2:504128/1‑150 (MQ=255)
                                                                                                 cctCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTTCATCGaggcggtggcga                                                                                                                                      <  1:1037805‑M2/59‑13 (MQ=255)
                                                                                                 cctCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTTCATCGaggcggtggcga                                                                                                                                      >  2:1037805‑M2/1‑47 (MQ=255)
                                                                                                 cctCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGt                                           >  1:431573/1‑150 (MQ=255)
                                                                                                  ctCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTg                                          >  1:108395/1‑150 (MQ=255)
                                                                                                  ctCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTg                                          >  2:691775/1‑150 (MQ=255)
                                                                                                  ctCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTg                                          <  1:66000/150‑1 (MQ=255)
                                                                                                   tCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGa                                                                    <  2:976954/123‑1 (MQ=255)
                                                                                                   tCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGa                                                                    >  1:976954/1‑123 (MQ=255)
                                                                                                     gCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTgggg                                       >  1:779895/1‑150 (MQ=255)
                                                                                                          tGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGc                                  <  2:492457/150‑1 (MQ=255)
                                                                                                          ggCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGc                                  <  2:151078/149‑1 (MQ=255)
                                                                                                          ggCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGc                                  <  2:141815/149‑1 (MQ=255)
                                                                                                             cATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTa                               <  1:210879/150‑1 (MQ=255)
                                                                                                                    gcCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATc                        >  2:1089717/1‑150 (MQ=255)
                                                                                                                     ccGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATCt                       >  2:900350/1‑150 (MQ=255)
                                                                                                                      cGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATCTg                      >  1:235076/1‑150 (MQ=255)
                                                                                                                              tCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATCTGGTCGGGGc              >  2:78910/1‑150 (MQ=255)
                                                                                                                                 ccACCGCCTCGATGAaggcggtggcgatgacttcggcgcagatggcaatggcgaggta                                                                                                       >  2:868978‑M2/1‑15 (MQ=255)
                                                                                                                                 ccACCGCCTCGATGAaggcggtggcgatgacttcggcgcagatggcaatggcgaggta                                                                                                       <  1:868978‑M2/58‑44 (MQ=255)
                                                                                                                                 ccACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATCTGGTCGGGGCTgg           <  2:431573/150‑1 (MQ=255)
                                                                                                                                  cACCGCCTCGATGAaggcggtggcgatgacttcggcgcagatggcaatggcgaggtaggtataggcattcatggcaggatcctccgttactgagcgggcattctagacgttgcctggatggggtaaagtcattacctatcgatatgggag          <  1:750219‑M2/150‑137 (MQ=255)
                                                                                                                                    ccGCCTCGATGAaggcggtggcgatgacttcggcgcagatggcaatggcgaggtaggtataggcattcatggcag                                                                                   <  2:1185426‑M2/75‑64 (MQ=255)
                                                                                                                                    ccGCCTCGATGAaggcggtggcgatgacttcggcgcagatggcaatggcgaggtaggtataggcattcatggcag                                                                                   >  1:1185426‑M2/1‑12 (MQ=255)
                                                                                                                                       ccTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGATGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATCTGGTCGGGGCTGGGGATtg     <  2:175457/150‑1 (MQ=255)
                                                                                                                                          cGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATCTGGTCGGGGCTGGGGATTGTGc  <  2:361415/150‑1 (MQ=255)
                                                                                                                                               |                                                                                                                                                
TCTCCCATATCGATAGGTAATGACTTTACCCCATCCAGGCAACGTCTAGAATGCCCGCTCAGTAACGGAGGATCCTGCCATGAATGCCTATACCTACCTCGCCATTGCCATCTGCGCCGAAGTCATCGCCACCGCCTCGATGAAGGCGGTGAAAGGCCTGAGCACGCCGTTGCCACTGCTGCTGATGGTGGTTGGCTATGGCATTGCGTTCTGGATGCTGACGCTGGTGGTCCGCAGCATTCCGGTGGGGATTGCCTACGCCATCTGGTCGGGGCTGGGGATTGTGC  >  NC_002947/5610558‑5610844

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.