New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5792896	37 (0.820)	5 (0.120)	4/234	NT	11.0%	coding (491/1419 nt)	gltD	glutamate synthase subunit beta
	?	NC_002947	= 5792916	46 (1.080)					coding (471/1419 nt)	gltD	glutamate synthase subunit beta

CTCGATGCCCATGCCGGTGAACACTTCACGGCGGTTGCTGAGCACGGTCTTTTCCAGCTTGAACTCGGGGATACCGAAGGTCAGCAGGCCACCGATCTCAGGGTTTTTGTCGAACACCACCGGGGTTACCCCGGCGCGCACCAGCACGTCGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5792742‑5792896 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggcgcCGGCCCGGCGGGCCTGGGCTGCGCCGACGTGCTGGTGCGCGCCGGGGTAACCCCGGTGGTGTTCGACAAAAACCCTGAGATCGGTGGCCTGCTGACCTTCGGTATCCCCGAGTTCAAGCTGGAAAAGACCGTGCTCAGCAACCGCCGT  <  NC_002947/5792916‑5792769                                                                                                                                                                                                                                                                                                                 CTCGATGCCCATGCCGGTGAACACTTCACGGCGGTTGCTGAGCACGGTCTTTTCCAGCTTGAACTCGGGGATACCGAAGGTCAGCAGGCCACCGATCTCAGGGTTTTTGTCGAACACCACCGGGGTTACCCCGGCGCGCACCAGCACGTC                                                                                                                                                           >  2:83114/1‑150  TCGATGCCCATGCCGGTGAACACTTCACGGCGGTTGCTGAGCACGGTCTTTTCCAGCTTGAACTCGGGGATACCGAAGGTCAGCAGGCCACCGATCTCAGGGTTTTTGTCGAACACCACCGGGGTTACCCCGGCGCGCACCAGCACGTCG                                                                                                                                                          >  1:529554/1‑150     ATGCCCATGCCGGTGAACACTTCACGGCGGTTGCTGAGCACGGTCTTTTCCAGCTTGAACTCGGGGATACCGAAGGTCAGCAGGCCACCGATCTCAGGGTTTTTGTCGAACACCACCGGGGTTACCCCGGCGCGCACCAGCACGTCGGCG                                                                                                                                                       >  1:1094297/1‑150     ATGCCCATGCCGGTGAACACTTCACGGCGGTTGCTGAGCACGGTCTTTTCCAGCTTGAACTCGGGGATACCGAAGGTCAGCAGGCCACCGATCTCAGGGTTTTTGTCGAACACCACCGGGGTTACCCCGGCGCGCACCAGCACGTCGGCG                                                                                                                                                       >  2:990919/1‑150                                  GTTGCTGAGCACGGTCTTTTCCAGCTTGAACTCGGGGATACCGAAGGTCAGCAGGCCACCGATCTCAGGGTTTTTGTCGAACACCACCGGGGTTACCCCGGCGCGCACCAGCACGTCGGCGCCGGCCCGGCGGGCCTGGGCTGCGCCGAC                                                                                                                          <  2:529554/150‑1                                                         GCTTGAACTCGGGGATACCGAAGGTCAGCAGGCCACCGATCTCAGGGTTTTTGTCGAACACCACCGGGGTTACCCCGGCGCGCACCAGCACGTCGGCGCCGGCCCGGCGGGCCTGGGCTGCGCCGAC                                                                                                                          <  1:591979/127‑1                                                         GCTTGAACTCGGGGATACCGAAGGTCAGCAGGCCACCGATCTCAGGGTTTTTGTCGAACACCACCGGGGTTACCCCGGCGCGCACCAGCACGTCGGCGCCGGCCCGGCGGGCCTGGGCTGCGCCGAC                                                                                                                          >  2:591979/1‑127                                                                                   AGCAGGCCACCGATCTCAGGGTTTTTGTCGAACACCACCGGGGTTACCCCGGCGCGCACCAGCACGTCGG                                                                                                                                                         <  1:878708/70‑1                                                                                   AGCAGGCCACCGATCTCAGGGTTTTTGTCGAACACCACCGGGGTTACCCCGGCGCGCACCAGCACGTCGG                                                                                                                                                         >  2:878708/1‑70                                                                                                  TCAGGGTTTTTGTCGAACACCACCGGGGTTACCCCGGCGCGCACCAGCACGTCGGCGCCGGCCCGGCGGGCCTGGGCTGCGCCGACGTG                                                                                                                       >  1:195619/1‑89                                                                                                  TCAGGGTTTTTGTCGAACACCACCGGGGTTACCCCGGCGCGCACCAGCACGTCGGCGCCGGCCCGGCGGGCCTGGGCTGCGCCGACGTG                                                                                                                       <  2:195619/89‑1                                                                                                                                                        GCGCCGGCCCGGCGGGCCTGGGCTGCGCCGACGTGCTGGTGCGCGCCGGGGTAACCCCGGTGGTGTTCGACAAAAACCCTGAGATCGGTGGCCTGCTGACCTTCGGTATCCCCGAGTTCAAGCTGGAAAAGACCGTGCTCAGCAACCGCC    <  1:765859/150‑1                                                                                                                                                          GCCGGCCCGGTGGGCCTGGGCTGCGCCGACGTGCTGGTGCGCGCCGGGGTAACCCCGGTGGTGTTCGACAAAAACCCTGAGATCGGTGGCCTGCTGACCTTCGGTATCCCCGAGTTCAAGCTGGAAAAGACCGTGCTCAGCAACCGCCGT  <  2:4604/150‑1                                                                                                                                                          GCCGGCCCGGCGGGCCTGGGCTGCGCCGACGTGCTGGTGCGCGCCGGGGTAACCCCGGTGGTGTTCGACAAAAACCCTGAGATCGGTGGCCTGCTTACCTTCGGTATCCCCGA                                       <  1:964861/113‑1                                                                                                                                                          GCCGGCCCGGCGGGCCTGGGCTGCGCCGACGTGCTGGTGCGCGCCGGGGTAACCCCGGTGGTGTTCGACAAAAACCCTGAGATCGGTGGCCTGCTTACCTTCGGTATCCCCGA                                       >  2:964861/1‑113                                                                                                                                                                                                                                                                                                                 CTCGATGCCCATGCCGGTGAACACTTCACGGCGGTTGCTGAGCACGGTCTTTTCCAGCTTGAACTCGGGGATACCGAAGGTCAGCAGGCCACCGATCTCAGGGTTTTTGTCGAACACCACCGGGGTTACCCCGGCGCGCACCAGCACGTCGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5792742‑5792896 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggcgcCGGCCCGGCGGGCCTGGGCTGCGCCGACGTGCTGGTGCGCGCCGGGGTAACCCCGGTGGTGTTCGACAAAAACCCTGAGATCGGTGGCCTGCTGACCTTCGGTATCCCCGAGTTCAAGCTGGAAAAGACCGTGCTCAGCAACCGCCGT  <  NC_002947/5792916‑5792769

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.