| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5795612 = | 59 (1.310) | 3 (0.070) | 3/242 | NT | 5.5% | coding (2344/4446 nt) | gltB | L‑glutamate synthase subunit alpha |
| ? | NC_002947 | 5795659 = | 46 (1.040) | coding (2297/4446 nt) | gltB | L‑glutamate synthase subunit alpha | |||||
ACCTGGAAAACGACCAGAAGCTGCTGGCGGCCGAAGCCTGGAGCGCGCGCAAGCCGATCCAGCAAGGTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5795683‑5795612‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccAGCAGCTTCTGGTCGTTTTCCAGGTCTTCGAAGCGCGCACCCTTGATGCGGCTGGACACGCCCTTGAAGCTCAGGCCGACCACTTCCTCGGCCAGGCCAATGGCTTCGAACAGCTGTGCACCGCGGTACGAGGCGATGGTGGAGATAC > NC_002947/5795659‑5795806 ACCTGGAAAACGACCAGAAGCTGCTGGCGGCCGAAGCCTGGAGCGCGCGCAAGCCGATCCAGCAAGGTGGC > 1:1077069/1‑71ACCTGGAAAACGACCAGAAGCTGCTGGCGGCCGAAGCCTGGAGCGCGCGCAAGCCGATCCAGCAAGGTGGC < 2:1077069/71‑1 CTGCTGGCGGCCGAAGCCTGGAGCGCGCGCAAGCCGATCCAGCAAGGTGGCCAGCAGCTTCTGGTCGTTTTCCAGGTCTTCGAAGCGCGCACCCTTGATGCGGCTGGACACGCCCTTGAAGCTCAGGCCGACCACTTCCTCGGCCAGGCC > 2:40083/1‑150 TGCTGGCGGCCGAAGCCTGGAGCGCGCGCAAGCCGATCCAGCAAGGTGGCCAGCAGCTTCTGGTCGTTTTCCAGGTCTTCGAAGCGCGCACCCTTGATGCGGCTGGACACGCCCTTGAAGCTCAGGCCGACCACTTCCTCGGCCAGGCCA > 2:775245/1‑150 GGCGGCCGAAGCCTGGAGCGCGCGCAAGCCGATCCAGCAAGGTGGCCAGCAGCTTCTGGTCGTTTTCCAGGTCTTCGAAGCGCGCACCCTTGATGCGGCTGGACACGCCCTTGAAGCTCAGGCCGACCACTTCCTCGGCCAGGCCAATGG < 1:775245/150‑1 CCAGCAGCTTCTGGTCGTTTTCCAGGTCTTCGAAGCCCGCACCCTTGATGCGGCTGGACACGCCCTTGAAGCTCAGGCCGACCACTTCCTCGGCCCGGCCAATGGCTTCGATCACCTGTGCACCTCGGTACGTGGCGATGTTGGTGATAC > 2:263532/1‑150 ACCTGGAAAACGACCAGAAGCTGCTGGCGGCCGAAGCCTGGAGCGCGCGCAAGCCGATCCAGCAAGGTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5795683‑5795612‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccAGCAGCTTCTGGTCGTTTTCCAGGTCTTCGAAGCGCGCACCCTTGATGCGGCTGGACACGCCCTTGAAGCTCAGGCCGACCACTTCCTCGGCCAGGCCAATGGCTTCGAACAGCTGTGCACCGCGGTACGAGGCGATGGTGGAGATAC > NC_002947/5795659‑5795806 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |