New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5795612 =	59 (1.310)	3 (0.070)	3/242	NT	5.5%	coding (2344/4446 nt)	gltB	L‑glutamate synthase subunit alpha
	?	NC_002947	5795659 =	46 (1.040)					coding (2297/4446 nt)	gltB	L‑glutamate synthase subunit alpha

GTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTCGGCCGCCAGCAGCTTCTGGTCGTTTTCCAGGTCTTCGAAGCGCGCACCCTTGATGCGGCTGGACACGCCCTTGAAGCTCAGGCCGACCACTTCCTCGGCCAGG  >  NC_002947/5795463‑5795754                                                                                                                                                      |                                                                                                                                               gTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTcagcag                                                                                                                                                >  1:59676/1‑150 (MQ=255)  gtatcaccaacatcgccacgtaccgaggtgcacaggtgatcgaagccattggccgggccgaggaagtggtcggcctgagcttcaagggcgtgtccagccgcatcaagggtgcgggcttcgaagacctggaaaacgaccagaagctgctgg                                                                                                                                               >  2:263532‑M1/149‑150 (MQ=255)            tcGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGACCTCCGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCt                                                                                                                                     >  1:813826/1‑150 (MQ=255)            tcGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCt                                                                                                                                     <  1:1009962/150‑1 (MQ=255)            tcGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCt                                                                                                                                     >  2:1064549/1‑150 (MQ=255)                    gggCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGc                                                                                                                             >  1:700121/1‑150 (MQ=255)                    gggCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGc                                                                                                                             <  2:700121/150‑1 (MQ=255)                               caccaGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTg                                                                                                                                    <  2:1058431/132‑1 (MQ=255)                               caccaGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTg                                                                                                                                    >  1:1058431/1‑132 (MQ=255)                                 ccaGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTGCGCGCGCTcc                                                                                                                <  1:1064549/150‑1 (MQ=255)                                   aGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAg                                                                                                              <  1:259147/150‑1 (MQ=255)                                         gtgtATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTCg                                                                                                        >  1:647855/1‑150 (MQ=255)                                              ttCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGCCCACTTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTCGgccgc                                                                                                   <  2:465789/150‑1 (MQ=255)                                               ccattggcctggccgaggaagtggtcggcctgagcttcaagggcgtgtccagccgcatcaagggtgcgcgcttcgaagacctggaaaacgaccagaagctgctGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTCGgccgcc                                                                                                  <  1:775245‑M1/47‑1 (MQ=255)                                                 cTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTCGgc                                                                                                      <  2:704705/144‑1 (MQ=255)                                                 cTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTCGgc                                                                                                      >  1:704705/1‑144 (MQ=255)                                                  ttGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGAGTGTTGACCACGTCCGGGTTGTAGGCATGGTATTCGCCACCGTGGACGAACTGCAGCTGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTCGGCCGCcagc                                                                                               >  2:1041344/1‑150 (MQ=255)                                                   tggcctggccgaggaagtggtcggcctgagcttcaagggcgtgtccagccgcatcaagggtgcgcgcttcgaagacctggaaaacgaccagaagctgctGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTCGGCCGCcagca                                                                                              >  2:775245‑M1/100‑150 (MQ=255)                                                    ggcctggccgaggaagtggtcggcctgagcttcaagggcgtgtccagccgcatcaagggtgcgcgcttcgaagacctggaaaacgaccagaagctgctGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTCGGCCGCcagcag                                                                                             >  2:40083‑M1/99‑150 (MQ=255)                                                       cTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGc                                                                                                                             >  1:27891/1‑115 (MQ=255)                                                       cTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGc                                                                                                                             <  2:27891/115‑1 (MQ=255)                                                        ttGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGc                                                                                                                                              >  2:365836/1‑97 (MQ=255)                                                        ttGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGc                                                                                                                                              <  1:365836/97‑1 (MQ=255)                                                             gTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTCGGCCGCCAGCAGCTTCTGGTc                                                                                    >  2:935420/1‑150 (MQ=255)                                                                 tCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTCGGCCGCCAGCAGCTTCTGGTCGttt                                                                                <  1:4994/150‑1 (MQ=255)                                                                   gCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTCGGCCGCCAGCAGCTTCTGGTCGTTTTc                                                                              >  2:348209/1‑150 (MQ=255)                                                                    cccTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTCGGCCGCCAGCAGCTTCTGGTCGTTTTcc                                                                             >  1:208257/1‑150 (MQ=255)                                                                        gctgcACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTCGGCCGCCAGCAGCTTCTGGTCGTTTTCCAGGt                                                                         >  1:478189/1‑150 (MQ=255)                                                                            cacaGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTCGGCCGCCAGCAGCTTCTGGTCGTTTTCCAGGTCTTc                                                                     >  1:748619/1‑150 (MQ=255)                                                                                gCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGc                                                                                                                             >  2:776409/1‑90 (MQ=255)                                                                                gCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGc                                                                                                                             <  1:776409/90‑1 (MQ=255)                                                                                 ccGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTgc                                                                                                                         >  1:1111935/1‑93 (MQ=255)                                                                                 ccGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTgc                                                                                                                         <  2:1111935/93‑1 (MQ=255)                                                                                   gCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTAGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTCGGCCGCCAGCAGCTTCTGGTCGTTTTCCAGGTCTTCGAAgcgc                                                              >  2:875390/1‑150 (MQ=255)                                                                                           ggTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTCGGCCGCCAGCAGCTTCTGGTCGTTTTCCAGGTCTTCGAAGCGCGCACCCtt                                                      >  2:37353/1‑150 (MQ=255)                                                                                               ttGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTCGGCCGCCAGCAGCTTCTGGTCGTTTTCCAGGTCTTCGAAGCGCGCACCCTTGATg                                                  <  1:37353/150‑1 (MQ=255)                                                                                                        tCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGc                                                                                                                                      >  1:318523/1‑57 (MQ=255)                                                                                                        tCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGc                                                                                                                                      <  2:318523/57‑1 (MQ=255)                                                                                                           gggTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTCGGCCGCCAGCAGCTTCTGGTCGTTTTCCAGGTCTTCGAAGCGCGCACCCTTGATGCGGCTGGACACg                                      >  1:1058069/1‑150 (MQ=255)                                                                                                            gggtGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTCGGCCGCCAGCAGCTTc                                                                                         >  1:1204381/4‑98 (MQ=255)                                                                                                            ggTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTCGGCCGCCAGCAGCTTc                                                                                         <  2:1204381/98‑1 (MQ=255)                                                                                                                   ggCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTCGGCCGCca                                                                                                 >  2:1145352/1‑83 (MQ=255)                                                                                                                   ggCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTCGGCCGCca                                                                                                 <  1:1145352/83‑1 (MQ=255)                                                                                                                    gCGTGGTATTCGCCACCGTGGACGAACTTCATCAGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTCGGCCGCCAGCAGCTTCTGGTc                                                                                    >  1:31112/1‑95 (MQ=255)                                                                                                                    gCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTCGGCCGCCAGCAGCTTCTGGTc                                                                                    <  2:31112/95‑1 (MQ=255)                                                                                                                    gCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTCGGCCGCCAGCAGCTTCTGGTCGTTTTCCAGGTCTTCGAAGCGCGCACCCTTGATGCGGCTGGACACGCCCTTGaa                              >  2:1046111/1‑149 (MQ=255)                                                                                                                    gCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTCGGCCGCCAGCAGCTTCTGGTCGTTTTCCAGGTCTTCGAAGCGCGCACCCTTGATGCGGCTGGACACGCCCTTGaa                              <  1:1046111/149‑1 (MQ=255)                                                                                                                    gCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTCGGCCGCCAGCAGCTTCTGGTCGTTTTCCAGGTCTTCGAAGCGCGCACCCTTGATGCGGCTGGACACGCCCTTGAAg                             <  2:110317/150‑1 (MQ=255)                                                                                                                    gCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTCGGCCGCCAGCAGCTTCTGGTCGTTTTCCAGGTCTTCGAAGCGAGCACCCTTGATACGGCTGGGCACGCCCTTGAAg                             >  2:975235/1‑150 (MQ=255)                                                                                                                     cGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTCGGCCGCCAGCAGCTTCTGGTCGTTTTCCa                                                                            <  2:826430/102‑1 (MQ=255)                                                                                                                     cGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTCGGCCGCCAGCAGCTTCTGGTCGTTTTCCa                                                                            >  1:826430/1‑102 (MQ=255)                                                                                                                        ggTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTCGGCCGCCAGCAGCTTCTGGTCATTTTCCAGGTCTTCGAAGCGCGCACCCTTGATGCGGCTGGACACGCCCTTGAAGCTCa                         <  2:1197003/150‑1 (MQ=255)                                                                                                                              cGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTCGGCCGCCAGCAGCTTCTGGTCGTTTTCCGGGTCGTCGAAGCGCGCACCCTTGATGCGGCTGGACACGCCCTTGAAGCTCAGGCCGa                   <  2:813826/150‑1 (MQ=255)                                                                                                                               gCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTCGGCCGCCAGCAGCTTCTGGTCGTTTTCCAGGTCTTCGAAGCGCGCACCCTTGATGCGGCTGGACACGCCCTTGAAGCTCAGGCCGAc                  >  1:1044886/1‑150 (MQ=255)                                                                                                                               gCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTCGGCCGCCAGCAGCTTCTGGTCGTTTTCCAGGTCTTCGAAGCGCGCACCCTTGATGCGGCTGGACACGCCCTTGAAGCTCAGGCCGAc                  <  2:748619/150‑1 (MQ=255)                                                                                                                                ccACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTCGGCCGCCAGCAGCTTCTGGTCGTTTTc                                                                              <  2:706821/89‑1 (MQ=255)                                                                                                                                ccACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTCGGCCGCCAGCAGCTTCTGGTCGTTTTc                                                                              >  1:706821/1‑89 (MQ=255)                                                                                                                                 cACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTc                                                                                                         <  2:112447/61‑1 (MQ=255)                                                                                                                                 cACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTc                                                                                                         >  1:112447/1‑61 (MQ=255)                                                                                                                                 cACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTCGGCCGCCAGCAGCTTCTGGTCGTTTTCCAGGTCTTCGAAGCGCGCACCCTTGATGCGGc                                              <  1:1136883/120‑1 (MQ=255)                                                                                                                                 cACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTCGGCCGCCAGCAGCTTCTGGTCGTTTTCCAGGTCTTCGAAGCGCGCACCCTTGATGCGGc                                              >  2:1136883/1‑120 (MQ=255)                                                                                                                                    cGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTCGGCCGCCAGCAGCTTCTGGTCGTTTTCCAGGTCTTCGAAGCGCGCACCCTTGATGCGGCTGGACACGCCCTTGAAGCTCAGGCCGACCACtt             >  2:77031/1‑150 (MQ=255)                                                                                                                                      tGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTCGGCCGCCAGCAGCTTCTGGTCGTTTTCCAGGTCTTCGAAGCGCGCACCCTTGATGCGGCTGGACACGCCCTTGAAGCTc                          >  2:610420/1‑135 (MQ=255)                                                                                                                                      tGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTCGGCCGCCAGCAGCTTCTGGTCGTTTTCCAGGTCTTCGAAGCGCGCACCCTTGATGCGGCTGGACACGCCCTTGAAGCTc                          <  1:610420/135‑1 (MQ=255)                                                                                                                                               ttCAGCAGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTCGGCCGCCAGCAGCTTCTGGTCGTTTTCCAGGTCTTCGAAGCGCGCACCCTTGATGCGGCTGGACACGCCCTTGAAGCTCAGGCCGACCACTTCCTCggccagg  <  2:1044886/150‑1 (MQ=255)                                                                                                                                               ttCAGCAGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTCGGCCGCCAGCAGCTTCTGGTCGTTTTCCAGGTCTTCGAAGCGCGCACCCTTGATGCGGCTGGACACGCCCTTGAAGCTCAGGCCGACCACTTCCTCggccagg  >  2:1114211/1‑150 (MQ=255)                                                                                                                                                 cagcagGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTCGGCCGCCAGCAGCTTCTGGTCGTTTTCCAGGTCTTCGAAGCGCGCACCCTTGATGCGGCTGGACACGCCCTTGa                               >  2:546663/1‑119 (MQ=255)                                                                                                                                                 cagcagGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTCGGCCGCCAGCAGCTTCTGGTCGTTTTCCAGGTCTTCGAAGCGCGCACCCTTGATGCGGCTGGACACGCCCTTGa                               <  1:546663/119‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                               GTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTGCGCGCGCTCCAGGCTTCGGCCGCCAGCAGCTTCTGGTCGTTTTCCAGGTCTTCGAAGCGCGCACCCTTGATGCGGCTGGACACGCCCTTGAAGCTCAGGCCGACCACTTCCTCGGCCAGG  >  NC_002947/5795463‑5795754

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.