| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5796762 = | 48 (1.060) | 4 (0.090) | 4/236 | NT | 7.7% | coding (1194/4446 nt) | gltB | L‑glutamate synthase subunit alpha |
| ? | NC_002947 | 5796792 = | 50 (1.160) | coding (1164/4446 nt) | gltB | L‑glutamate synthase subunit alpha | |||||
GCCGCCACGCGGTGTGCCTGCTCGACCGTAACGGTCTACGCCCGGCGCGCTGGGTGACCACCACCAATGGTTACATCACCATCGCCTCGGAAATCGGCGTATGGGGCTATCAGCCTGAGGAAGTGCTGGCCAAGGGCCGTGTCGGCCCGGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5796916‑5796762‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccagCACTTCCTCAGGCTGATAGCCCCATACGCCGATTTCCGAGGCGATGGTGATGTAACCATTGGTGGTGGTCACCCAGCGCGCCGGGCGTAGACCGTTACGGTCGAGCAGGCACACCGCGTGGCGGCCTTCGGTCATGACGATACCGGC > NC_002947/5796792‑5796938 GCCGCCACGCGGTGTGCCTGCTCGACCGTAACGGTCTACGCCCGGCGCGCTGGGTGACCACCACCAATGGTTACATCACCATCGCCTCGGAAATCGGCGTATGGGGCTATCAGCCTGAGGAAGTGCTGGCCAAGGGCCGTGTCGGCCCGG < 2:715415/150‑1 CGCCACGCGGTGTGCCTGCTCGACCGTAACGGTCTACGCCCGGCGCGCTGGGTGACCACCACCAATGGTTACATCACCATCGCCTCGGAAATCGGCGTATGGGGCTATCAGCCTGAGGAAGTGCTGGCCAAGGGCCGTGTCGGCCCGGGC < 2:48310/150‑1 CCGGCGCGCTGGGTGACCACCACCAATGGTTACATCACCATCGCCTCGGAAATCGGCGTATGGGGCTATCAGCCTGAGGAAGTGCTGGCCAAGGGCCGTGTCGGCCCGGGCCA < 1:781909/113‑1 CCGGCGCGCTGGGTGACCACCACCAATGGTTACATCACCATCGCCTCGGAAATCGGCGTATGGGGCTATCAGCCTGAGGAAGTGCTGGCCAAGGGCCGTGTCGGCCCGGGCCA > 2:781909/1‑113 GAAGTGCTGGCCAAGGGCCGTGTCGGCCCGGGCCAGCACTTCCTCAGGCTGATAGCCCCATACGCCGATTTCCGAGGCGATGGTGATGTAACCATTGGT < 1:124117/99‑1 GAAGTGCTGGCCAAGGGCCGTGTCGGCCCGGGCCAGCACTTCCTCAGGCTGATAGCCCCATACGCCGATTTCCGAGGCGATGGTGATGTAACCATTGGT > 2:124117/1‑99 GCCAAGGGCCGTGTCGGCCCGGGCCAGCACTTCCTCAGGCTGATAGCCCCATACGCCGATTTCCGAGGCGATGG > 1:1140724/1‑74 GCCAAGGGCCGTGTCGGCCCGGGCCAGCACTTCCTCAGGCTGATAGCCCCATACGCCGATTTCCGAGGCGATGG < 2:1140724/74‑1 GGCCAGCACTTCCTCAGGCTGATAGCCCCATACGCCGATTTCCGAGGCGATGGTGATGTAACCATTGGTGGTGGTCACCCAGCGCGCCGGGCGTAGACCGTTACGGTCGAGCAGGCACACCGCGTGGCGGCCTTCGGTCATGACGATACC < 1:793663/150‑1 CAGCACTTCCTCAGGCTGATAGCCCCATACGCCGATTTCCGAGGCGATGGTGATGTAACCATTGGTGGTGGTCACCCAGCGCGCCGGGCGTAGACCGTTACGGTCGAGCAGGCACACCGCGTGGCGGCCTTCGGTCATGACGATACCGGC > 1:351007/1‑150 CAGCACTTCCTCAGGCTGATAGCCCCATACGCCGATTTCCGAGGCGATGGTGATGTAACCATTGGTGGTGGTCACCCAGCGCGCCGGGCGTAGACCGTTACGGTCGAGCAGGCACACCGCGTGGCGGCCTTCGGTCATGACGATACCGGC > 1:373305/1‑150 CAGCACTTCCTCAGGCTGATAGCCCCATACGCCGATTTCCGAGGCGATGGTGATGTAACCATTGGTGGTGGTCACCCAGCGCGCCGGGCGTAGACCGTTACGGTCGAGCAGGCACACCGCGTGGCGGCCTTCGGTCATGACGATACCGGC > 1:642991/1‑150 GCCGCCACGCGGTGTGCCTGCTCGACCGTAACGGTCTACGCCCGGCGCGCTGGGTGACCACCACCAATGGTTACATCACCATCGCCTCGGAAATCGGCGTATGGGGCTATCAGCCTGAGGAAGTGCTGGCCAAGGGCCGTGTCGGCCCGGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5796916‑5796762‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccagCACTTCCTCAGGCTGATAGCCCCATACGCCGATTTCCGAGGCGATGGTGATGTAACCATTGGTGGTGGTCACCCAGCGCGCCGGGCGTAGACCGTTACGGTCGAGCAGGCACACCGCGTGGCGGCCTTCGGTCATGACGATACCGGC > NC_002947/5796792‑5796938 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |