| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5891373 = | 50 (1.110) | 3 (0.070) | 3/232 | NT | 6.6% | coding (301/786 nt) | plpB | NLPA lipoprotein |
| ? | NC_002947 | 5891399 = | 38 (0.900) | coding (275/786 nt) | plpB | NLPA lipoprotein | |||||
GGCGTGGACCTTCAGATCAAGGTCTTCACCGATTACGTGCAGCCGAACGTGCAGGTGGACCAGAAGCGTCTGGACGCCAACTACTTCCAGACGCTGCCGTACCTGCAGAACTTCAACGAAGGCAAGGGCACCCACC‑TGGAAACCGTGGTGGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5891526‑5891373‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgggtgCCCTTGCCTTCGTTGAAGTTCTGCAGGTACGGCAGCGTCTGGAAGTAGTTGGCGTCCAGACGCTTCTGGTCCACCTGCACGTTCGGCTGCACGTAATCGGTGAAGACCTTGATCTGAAGGTCCACGCCTTCTTTTGCCAGGGTCGGCT > NC_002947/5891399‑5891546 tGCGTTGACCTTCAGATCAATGTCTTCACCGATTACGTGCAGCCAAACCTGCAGGTGGACCAGAAGCGTCTGGACGCCAACTACTTCCAGACGCTGCCTTACCTGCAGAACTTCAACGAAGGCAAGGGCACCCACC‑TGGAAACCGTGGTG < 1:454936/149‑1gtCGTGGACATTCAGATCAAGGTCTTAACAGATTACGTGCAGCCGAACGTGCAGGTGGACCAGAAGCGTCTGGACGCCAACTACTTCCAGACGCTGCCGTACCTGCAGAACTTCAACGAAGGCAAGGGCACCCACC‑TGGAAACCGTGGTG < 2:665705/148‑1 GCGTGGACCTTCAGATCAAGGTCTTCACCGATTACGTGCAGCCGAACGTGCAGGTGGACCAGAAGCGTCTGGACGCCAACTACTTCCAGACGCTGCCGTACCTGCAGAACTTCAACGAAGGCAAGGGCACCCACC‑TGGAAACCGTGGTGG < 1:181880/150‑1 GTGGACCTTCAGATCAAGGTCTTCACCGATTACGTGCAGCCGAACGTGCAGGTGGACCAGAAGCGTCTGGACGCCAACTACTTCCAGACGCTGCCGTACCTGCAGAACTTCAACGAAGGCAAGGGCACCCACC‑TGGAAACCGTGGTGGGT > 2:880056/1‑150 CAAGGTCTTCACCGATTACGTGCAGCCGAACGTGCAGGTGGACCAGAAGCGTCTGGACGCCAACTACTTCCAGACGCTGCCGTACCTGCAGAACTTCAACGAAGGCAAGGGCACCCACCACGGTTTCC‑AGGTGGGTGCCCTTGCCTTCGT < 1:45328/150‑1 GCGTCTGGACGCCAACTACTTCCAGACGCTGCCGTACCTGCAGAACTTCAACGAAGGCAAGGGCACCCACC‑TGGAAACCGTGGTGG > 1:553556/1‑86 GCGTCTGGACGCCAACTACTTCCAGACGCTGCCGTACCTGCAGAACTTCAACGAAGGCAAGGGCACCCACC‑TGGAAACCGTGGTGG < 2:553556/86‑1 GGCACCCACC‑TGGAAACCGTGGTGGGTGCCCTTGCCTTCGTTGAAGTTCTGCAGGTACGGCAGCGTCTGGAAGTAGTTGGCGTCCAGACGC < 1:424750/91‑1 GGCACCCACC‑TGGAAACCGTGGTGGGTGCCCTTGCCTTCGTTGAAGTTCTGCAGGTACGGCAGCGTCTGGAAGTAGTTGGCGTCCAGACGC > 2:424750/1‑91 TGCCCTTGCCTTCGTTGAAGTTCTGCAGGTACGGCAGCGTCTGGAAGTAGTTGGCGTCCAGACGCTTCTGGTCCACCTGCACGTTCGGCTGCACGTAATCGGTGAAGACCTTGATCTGAAGGTCCACGCCTTCTTTTGCCAGGGTCGGCT < 1:1138916/150‑1 GGCGTGGACCTTCAGATCAAGGTCTTCACCGATTACGTGCAGCCGAACGTGCAGGTGGACCAGAAGCGTCTGGACGCCAACTACTTCCAGACGCTGCCGTACCTGCAGAACTTCAACGAAGGCAAGGGCACCCACC‑TGGAAACCGTGGTGGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5891526‑5891373‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgggtgCCCTTGCCTTCGTTGAAGTTCTGCAGGTACGGCAGCGTCTGGAAGTAGTTGGCGTCCAGACGCTTCTGGTCCACCTGCACGTTCGGCTGCACGTAATCGGTGAAGACCTTGATCTGAAGGTCCACGCCTTCTTTTGCCAGGGTCGGCT > NC_002947/5891399‑5891546 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |