| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2063203 = | 40 (0.890) | 6 (0.170) | 5/198 | NT | 18.5% | intergenic (+17/‑190) | PP_1838/PP_1839 | membrane protein/hypothetical protein |
| ? | NC_002947 | 2063297 = | 21 (0.580) | intergenic (+111/‑96) | PP_1838/PP_1839 | membrane protein/hypothetical protein | |||||
CGAGTTCAAGGCCGAACTGATCGAAAGCCCGGACCAGCCGGAAATGCTCAAGAAGCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCACAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACATTATCCCCGCCCCAAGGTCAG > NC_002947/2063054‑2063342 | cGAGTTCAAGGCCGAACTGATCGAAAGCCCGGACCAGCCGGAAATGCTCAAGAAGCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCg > 1:132786/1‑150 (MQ=255) atgcggacggttcgcccttctggtcggcaaaaatgacttcccactctttcattgaacggaccctctcagtcaacgaacaccaggtgtgtgatgcctgaataactgaccttggggcggggataatgttcagtccgggaaaattgtgcgggg > 1:831051‑M1/149‑150 (MQ=255) ggttcgcccttctggtcggcaaaaatgacttcccactctttcattgaacggaccctctcagtcaacgaacaccaggtgtgtgatgcctgaataactgaccttggggcggggataatgttcagtccgggaaaattgtgcggGGCCCATTcg < 1:157311‑M1/10‑1 (MQ=255) gCCGAACTGATCGAAAGCCCGGACCAGCCGGAAATGCTCAAGAAGCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTcgc > 2:1158784/1‑150 (MQ=255) gCCGAACTGATCGAAAGCCCGGACCAGCCGGAAATGCTCAAGAAGCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTcgc > 2:1159533/1‑150 (MQ=255) ttcgcccttctggtcggcaaaaatgacttcccactctttcattgaacggaccctctcagtcaacgaacaccaggtgtgtgatgcctgaataactgaccttggggcggggataatgttcagtccgggaaaattgtgcggGGCCCATTcgcg < 1:789635‑M1/12‑1 (MQ=255) ccGAACTGATCGAAAGCCCGGAGCAGCCGGAAATGCGCAAGGAGCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTcgcg < 2:545714/150‑1 (MQ=255) cccttctggtcggcaaaaatgacttcccactctttcattgaacggaccctctcagtcaacgaacaccaggtgtgtgatgcctgaataactgaccttggggcggggataatgttcagtccgggaaaattgtgcggGGCCCATTCGCGGGCt > 2:789635‑M1/135‑150 (MQ=255) tGATCGAAAGCCCGGACCAGCCGGAAATGCTCAAGAAGCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGc > 2:59374/1‑135 (MQ=255) tGATCGAAAGCCCGGACCAGCCGGAAATGCTCAAGAAGCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGc < 1:59374/135‑1 (MQ=255) cttctggtcggcaaaaatgacttcccactctttcattgaacggaccctctcagtcaacgaacaccaggtgtgtgatgcctgaataactgaccttggggcggggataatgttcagtccgggaaaatggtgcggGGCCCATTCGCGGGCTTg < 1:908141‑M1/18‑1 (MQ=255) ttcgtgtctgcaaaaatgactccccactctttcattgaacggcccctctcagtcaacgaacaccaggtgtgtgatgcctgaataactgaccttggggcggggatactgttccgtccgggaaaattgtgcggGGCCCATTCGCGGGCTTGc > 2:908141‑M1/132‑150 (MQ=255) gATCGAAAGCCCGGACCAGCCGGAAATGCTCCCGAAACGGGAATCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGc < 2:435925/150‑1 (MQ=255) aaaGCCCGGACCAGCCGGAAATGCTCAAGAAGCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCt > 2:1187104/1‑150 (MQ=255) aGCCCGGACCAGCCGGAAATGCTCAAGAAGCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCAAGCCCGcgaa < 2:1088285/150‑4 (MQ=255) cccGGACCAGCCGGAAATGCTCAAGAAGCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCca < 2:132786/150‑1 (MQ=255) ccGGACCAGCCGGAAATGCTCAAGAAGCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCcac > 2:879573/1‑150 (MQ=255) gAAATGCTCAAGAAGCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCACAGGCATTAcaca < 2:410397/150‑1 (MQ=255) aaTGCTCAAGAAGCTGGAAGCGTATATCCAGAACGGATCCAGGGGGCGGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCACAGGCATTGCACAgg < 1:569726/150‑1 (MQ=255) tCAAGAAGCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCACAGGCATTGCACAGGGTTCg > 1:1040359/1‑150 (MQ=255) tCAAGAAGCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCACAGGCATTGCACAGGGTTCg < 1:218373/150‑1 (MQ=255) aagaagCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTAGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCTGGCTTGCCCGCGCCCGCCGGCATTGCACAGGGTTctgg > 1:771756/1‑147 (MQ=255) tataTCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCACAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCt < 2:938497/150‑1 (MQ=255) aGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCACAGGCa > 1:789128/1‑112 (MQ=255) aGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCACAGGCa < 2:789128/112‑1 (MQ=255) gACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGTCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCACAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGc < 2:37219/150‑1 (MQ=255) aacgaacaccaggtgtgtgatgcctgaataactgaccttggggcggggataatgttcagtccgggaaaattgtgcggGGCCCATTcgcg < 1:437386‑M1/12‑1 (MQ=255) aacgaacaccaggtgtgtgatgcctgaataactgaccttggggcggggataatgttcagtccgggaaaattgtgcggGGCCCATTcgcg > 2:437386‑M1/78‑89 (MQ=255) cgaacaccaggtgtgtgatgcctgaataactgaccttggggcggggataatgttcagtccgggaaaattgtgcggGGCCCATTCGCGGGCTTGCCCGCTCCCACAGGCATTGAAAAGTGTTCGGACCTTGTGCAGGTCCTGTGCGAGCgg > 1:698423‑M1/76‑150 (MQ=255) ccGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCACAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCgg < 1:288918/150‑1 (MQ=255) gaacacccggtgtctgatgcctgaataactgaccttggggcggggataatgttcagtccgggaaaattgtgcggGGCCCATTCGCGGGCTTGCTCGCGACCCCAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCggg > 2:364536‑M1/75‑150 (MQ=255) gcgACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAGACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCACAGGCATTGCACAGGGTTCGGACCTTGTGCaat > 2:1132904/1‑132 (MQ=255) gcgACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAGACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCACAGGCATTGCACAGGGTTCGGACCTTGTGCaat < 1:1132904/134‑3 (MQ=255) ccAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTCGCCCGCTCGCACAGGACCTGCACAAGGTCCGAACCCTGTGCAATGCCTGTGGGAGCGGGCAAGc < 2:631475/150‑1 (MQ=14) tgctgGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCACAg < 2:805706/91‑1 (MQ=255) tgctgGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCACAg > 1:805706/1‑91 (MQ=255) gATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCACAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCGGGCAAGCCCGCGAATGGGccc > 2:692401/1‑150 (MQ=255) acCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCACAGGCATTGc > 1:641279/1‑87 (MQ=255) acCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCACAGGCATTGc < 2:641279/87‑1 (MQ=255) acCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCACAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCtgt > 2:1124176/1‑116 (MQ=255) acCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCACAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCtgt < 1:1124176/116‑1 (MQ=255) cACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCACAGGCATTGCACAgg > 2:963639/1‑77 (MQ=255) cACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCACAGGCATTGCACAgg < 1:963639/77‑1 (MQ=255) cACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCACAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGa > 1:526673/1‑150 (MQ=255) ggCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCACAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACa > 1:1072845/1‑150 (MQ=255) cGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGGGGGCTTGCCCGCTTCCACAGGCATTGCACAGGGTTCGGACCTTGTGCAGGACCGGGGCTAGCGGGTAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACATTATccc < 2:771756/150‑1 (MQ=255) cGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCtt > 2:136152/1‑41 (MQ=255) cGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCtt < 1:136152/41‑1 (MQ=255) cGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCACAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACATTATccc > 2:157311/1‑150 (MQ=255) gAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTACCCGCTCCCACAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACATTATcccc > 1:1149571/1‑150 (MQ=255) aaGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCACAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACATTATCCCCg < 1:692401/150‑1 (MQ=255) cgggaaaattgtgcggGGCCCATTCGCGGGCTTGCCCGCTCCCACAGGCATTGCACAGGGTTCGGACCTtg > 2:43344‑M1/17‑71 (MQ=255) cgggaaaattgtgcggGGCCCATTCGCGGGCTTGCCCGCTCCCACAGGCATTGCACAGGGTTCGGACCTtg < 1:43344‑M1/55‑1 (MQ=255) cgggaaaattgtgcggGGCCCATTCGCGGGCTTGCCCGCTCCCACAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGa < 2:41332‑M1/71‑1 (MQ=255) cgggaaaattgtgcggGGCCCATTCGCGGGCTTGCCCGCTCCCACAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGa > 1:41332‑M1/17‑87 (MQ=255) ccGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCACAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACATTATCCCCGCCCCAAg < 1:1187104/150‑1 (MQ=255) gCCGGGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCACAGGCATGGCAGAGGGTGCGGACCTTGTGCAGGTCCTGTCCGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACATTATCCCCGCCCCAAGGTCAg < 1:684631/150‑1 (MQ=38) | CGAGTTCAAGGCCGAACTGATCGAAAGCCCGGACCAGCCGGAAATGCTCAAGAAGCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCACAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACATTATCCCCGCCCCAAGGTCAG > NC_002947/2063054‑2063342 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |