| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2943021 = | 38 (0.840) | 5 (0.120) | 5/238 | NT | 10.9% | intergenic (‑779/‑594) | PP_2575/PP_2577 | hypothetical protein/paraquat‑inducible protein B |
| ? | NC_002947 | 2943057 = | 45 (1.040) | intergenic (‑815/‑558) | PP_2575/PP_2577 | hypothetical protein/paraquat‑inducible protein B | |||||
GCTGGCGGGGCTGCTCGATGTGATCCCCGGTATCGGCCTGCTGGCCCTGGCCGCATTGAGCATGTTGATCATCCACATTGCCGGCAAGGACATCCGCGACTTGTGGGAACAGGTATGACTGCCCCGGTCAAGGCGCACGACCTTGGCTTGTGTCTG‑TGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCATCAGCCGTGGCTGGGCGTTTCTGCTGGCAGCCCTGGTTTTCTA > NC_002947/2942872‑2943164 | gCTGGCGGGGCTGCTCGATGTGATCCCCGGTATCGGCCTGCTGGCCCTGGCCGCATTGAGCATGTTGATCATCCACATTGCCGGCAAGGACATCCGCGACTTGTGGGAACAGGTATGACTGCCCCGGTCAAGGCGCACGACCTTGGCTtg > 1:656549/1‑150 (MQ=255) tttcggtgtgcatcaccggcagcaggttggcggggatgtagaaaaccagggctgccagcagaaacgcccagccacggctgatggcattggccttgcgccggtgaatgacggcgccgcaacggttgcaggtgtgcgcgccactgcgcgtgt < 1:844751‑M1/4‑1 (MQ=255) gggCTGCTCGATGTGATCCCCGGTATCGGCCTGCTGGCCCTGGCCGCATTGAGCATGTTGATCATCCACATTGCCGGCAAGGACATCCGCGACTTGTGGGAACAGGTATGACTGCCCCGGTCAAGGCGCACGACCTTGGCTTGTGTCtg‑t < 1:333984/150‑1 (MQ=255) ggTATCGGCCTGCTGGCCCTGGCCGCATTGAGCATGTTGATCATCCACATTGCCGGCAAGGACATCCGCGACTTGTGGGAACAGGTATGACTGCCCCGGTCAAGGCGCACGACCTTGGCTTGTGTCTG‑TGCCATGGCTGTGGCCAGGCAt > 1:477002/1‑150 (MQ=255) ggTATCGGCCTGCTGGCCCTGGCCGCATTGAGCATGTTGATCATCCACATTGCCGGCAAGGACATCCGCGACTTGTGGGAACAGGTATGACTGCCCCGGTCAAGGCGCACGACCTTGGCTTGTGTCTG‑TGCCATGGCTGTGGCCAGGCAt < 2:273957/150‑1 (MQ=255) ttggcggggatgtagaaaaccagggctgccagcagaaacgcccagccacggctgatggcattggccttgcgccggtgaatgacggcgccgcaacggttgcaggtgtgcgcgtcactgcgcGTGTCGCATGCCATGGCTGTGGCCAGGCAt > 2:1051561‑M1/121‑150 (MQ=255) ggCCTGCTGGCCCTGGCCGCATTGAGCATGTTGATCATCCACATTGCCGGCAAGGACATCCGCGACTTGTGGGAACAGGTATGACTGCCCCGGTCAAGGCGCACGACCTTGGCTTGTGTCTG‑TGCCATGGCTGTGGCCAGGCATGCGaca > 1:1155789/1‑150 (MQ=255) tgctgGCCCTGGCCGCATTGAGCATGTTGATCATCCACATTGCCGGCAAGGACATCCGCGACTTGTGGGAACAGGTATGACTGCCCCGGTCAAGGCGCACGACCTTGGCTTGTGTCTG‑TGCCATGGCTGTGGCCAGGCATGCGACAcgcg > 2:1052646/1‑150 (MQ=255) cctggccGCATTGAGCATGTTGATCATCCACATTGCCGGCAAGGACATCCGCGACTTGTGGGAACAGGTATGACTGCCCCGGTCAAGGCGCACGACCTTGGCTTGTGTCTG‑TGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGgc < 2:269849/150‑1 (MQ=255) ccGCATTGAGCATGTTGATCATCCACATTGCCGGCAAGGACATCCGCGACTTGTGGGAACAGGTATGACTGCCCCGGTCAAGGCGCACGACCTTGGCTTGTGTCTG‑TGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGgcgcatg < 2:1155789/150‑4 (MQ=255) cGCATTGAGCATGTTGATCATCCACATTGCCGGCAAGGACATCCGCGACTTGTGGGAACAGGTATGACTGCCCCGGTCAAGGCGCACGACCTTGGCTTGTGTCTG‑TGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGcac > 1:961638/1‑150 (MQ=255) gCATGTTGATCATCCACATTGCCGGCAAGGACATCCGCGACTTGTGGGAACAGGTATGACTGCCCCGGTCAAGGCGCACGACCTTGGCTTGTGTCTG‑TGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCaa > 2:48359/1‑150 (MQ=255) agcagaaacgcccagccacggctgatggcattggccttgcgccggtgaatgacggcgccgcaacggttgcaggtgtgcgcgccactgcgcGTGTCTG‑TGCCATGGCTGTGGCCAGGCATGCGACACGCGCa > 1:504406‑M1/91‑131 (MQ=255) agcagaaacgcccagccacggctgatggcattggccttgcgccggtgaatgacggcgccgcaacggttgcaggtgtgcgcgccactgcgcGTGTCTG‑TGCCATGGCTGTGGCCAGGCATGCGACACGCGCa < 2:504406‑M1/41‑1 (MQ=255) aTGTTGATCATCCACATTGCCGGCAAGGACATCCGCGACTTGTGGGAACAGGTATGACTGCCCCGGTCAAGGCGCACGACCTTGGCTTGTGTCTG‑TGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGc > 2:1040080/1‑146 (MQ=255) aTGTTGATCATCCACATTGCCGGCAAGGACATCCGCGACTTGTGGGAACAGGTATGACTGCCCCGGTCAAGGCGCACGACCTTGGCTTGTGTCTG‑TGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGc < 1:1040080/146‑1 (MQ=255) ttGATCATCCACATTGCCGGCAAGGACATCCGCGACTTGTGGGAACAGGTATGACTGCCCCGGTCAAGGCGCACGACCTTGGCTTGTGTCTG‑TGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGtt < 2:477002/150‑1 (MQ=255) tGATCATCCACATTGCCGGCAAGGACATCCGCGACTTGTGGGAACAGGTATGACTGCCCCGGTCAAGGCGCACGACCTTGGCTTGTGTCTG‑TGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTg < 2:9716/150‑1 (MQ=255) ccagccacggctgatggcattggccttgcgccggtgaatgacggcgccgcaacggttgcaggtgtgcgcgccactgcgcGTGTCTG‑TGCCATGGCTGTGGCCAGGCATGCGa < 1:894152‑M1/33‑1 (MQ=255) ccagccacggctgatggcattggccttgcgccggtgaatgacggcgccgcaacggttgcaggtgtgcgcgccactgcgcGTGTCTG‑TGCCATGGCTGTGGCCAGGCATGCGa > 2:894152‑M1/80‑112 (MQ=255) ccACATTGCCGGCAAGGACATCCGCGACTTGTGGGAACAGGTATGACTGCCCCGGTCAAGGCGCACGACCTTGGCTTGTGTCTG‑TGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGAAACCGTTGCGGCGcc > 1:108055/1‑150 (MQ=255) cGGCAAGGACATCCGCGACTTGTGGGAACAGGTATGACTGCCCCGGTCAAGGCGCACGACCTTGGCTTGTGTCTG‑TGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCAc > 2:720331/1‑150 (MQ=255) ggCAAGGACATCCGCGACTTGTGGGAACAGGTATGACTGCCCCGGTCAAGGCGCACGACCTTGGCTTGTGTCTG‑TGCCATGCCGGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCAcc > 1:1169282/1‑150 (MQ=255) ttGTGGGAACAGGTATGACTGCCCCGGTCAAGGCGCACGACCTTGGCTTGTGTCTG‑TGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAg < 1:724211/140‑1 (MQ=255) ttGTGGGAACAGGTATGACTGCCCCGGTCAAGGCGCACGACCTTGGCTTGTGTCTG‑TGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAg > 2:724211/1‑140 (MQ=255) ttGTGGGAACAGGTATGACTGCCCCGGTCAAGGCGCACGACCTTGGCTTGTGTCTG‑TGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCa > 2:401075/1‑150 (MQ=255) tgtgGGAACAGGTATGACTGCCCCGGTCAAGGCGCACGACCTTGGCTTGTGTCTG‑TGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCAt < 1:401075/150‑1 (MQ=255) tgGGAACAGGTATGACTGCCCCGGTCAAGGCGCACGACCTTGGCTTGTGTCTG‑TGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCATCa > 2:1141986/1‑150 (MQ=255) aCAGGTATGACTGCCCCGGTCAAGGCGCACGACCTTGGCTTGTGTCTG‑TGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCATCAGCCGt < 2:955442/150‑1 (MQ=255) gTATGACTGCCCCGGTCAAGGCGCACGACCGTGGCTTGTGTCTG‑TGCCATGTCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACCCCTGCAACCGTTGCGGCGCCGTCATTCATCGGCGCAAGGCCAATGCCATCAGCCGTGGCt > 1:755569/1‑150 (MQ=255) tATGACTGCCCCGGTCAAGGCGCACGACCTTGGCTTGTGTCTG‑TGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCATCAGCCGTGGCTg > 1:529767/1‑150 (MQ=255) cTGCCCCGGTCAAGGCGCACGACCTTGGCTTGTGTCTG‑TGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCATCAGCCGTGGCTGGGCGt > 2:844751/1‑150 (MQ=255) ccccGGTCAAGGCGCACGACCTTGGCTTGTGTCTG‑TGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAAt < 2:1097246/125‑1 (MQ=255) ccccGGTCAAGGCGCACGACCTTGGCTTGTGTCTG‑TGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAAt > 1:1097246/1‑125 (MQ=255) cccGGTCAAGGCGCACGACCTTGGCTTGTGTCTG‑TGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCATCAGCCGTGGCTGGGCGTTTct > 1:527340/1‑150 (MQ=255) gTCAAGGCGCACGACCTTGGCTTGTGTCTG‑TGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGAAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCATCAGCCGTGGCTGGGCGTTTctgctg < 2:108055/150‑1 (MQ=255) aaGGCGCACGACCTTGGCTTGTGTCTG‑TGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCATCAGCCGTGGCTGGGCGTTTCTGCTGGCa > 1:1162949/1‑150 (MQ=255) aGGCGCACGACCTTGGCTTGTGTCTG‑TGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCATCAGCCGTGGCTGGGCGTTTCTGCTGGCAg > 2:787779/1‑150 (MQ=255) gcgcACGACCTTGGCTTGTGTCTG‑TGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCATCAGCCGTGGCTGGGCGTTTCTGCTGGCAGcc > 2:1177067/1‑150 (MQ=255) aCGACCTTGGCTTGTGTCTG‑TGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCATCAGCCGTGGCTGGGCGt < 2:799703/132‑1 (MQ=255) aCGACCTTGGCTTGTGTCTG‑TGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCATCAGCCGTGGCTGGGCGt > 1:799703/1‑132 (MQ=255) gACCTTGGCTTGTGTCTG‑TGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCACAGCCATCAGCCTTTTCTGGGCGTTTCTGCTGGCAGCCCTGGtt > 2:699194/1‑150 (MQ=255) gACCTTGGCTTGTGTCTG‑TGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCATCAGCCGTGGCTGGGCGTTTCTGCTGGCAGCCCTGGtt < 1:48359/150‑1 (MQ=255) tGGCTTGTGTCTG‑TGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCATCAGCCGTGGCTGGGCGTTTCTGCTGGCAGCCCTGGTTTTCTa < 1:1141986/150‑1 (MQ=255) tGGCTTGTGTCTG‑TGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCATCAGCCGTGGCTGGGCGTTTCTGCTGGCAGCCCTGGTTTTCTa > 2:328928/1‑150 (MQ=255) | GCTGGCGGGGCTGCTCGATGTGATCCCCGGTATCGGCCTGCTGGCCCTGGCCGCATTGAGCATGTTGATCATCCACATTGCCGGCAAGGACATCCGCGACTTGTGGGAACAGGTATGACTGCCCCGGTCAAGGCGCACGACCTTGGCTTGTGTCTG‑TGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCATCAGCCGTGGCTGGGCGTTTCTGCTGGCAGCCCTGGTTTTCTA > NC_002947/2942872‑2943164 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |