| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2943021 = | 38 (0.840) | 5 (0.120) | 5/238 | NT | 10.9% | intergenic (‑779/‑594) | PP_2575/PP_2577 | hypothetical protein/paraquat‑inducible protein B |
| ? | NC_002947 | 2943057 = | 45 (1.040) | intergenic (‑815/‑558) | PP_2575/PP_2577 | hypothetical protein/paraquat‑inducible protein B | |||||
TGCTGGCCCTGGCCGCATTGAGCATGTTGATCATCCACATTGCCGGCAAGGACATCCGCGACTTGTGGGAACAGGTATGACTGCCCCGGTCAAGGCGCACGACCTTGGCTTGTGTCTGTGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCATCAGCCGTGGCTGGGCGTTTCTGCTGGCAGCCCTGGTTTTCTACATCCCCGCCAACCTGCTGCCGGTGATGCACACCGAAATGCT > NC_002947/2942910‑2943206 | tgctgGCCCTGGCCGCATTGAGCATGTTGATCATCCACATTGCCGGCAAGGACATCCGCGACTTGTGGGAACAGGTATGACTGCCCCGGTCAAGGCGCACGACCTTGGCTTGTGTCTGTGCCATGGCTGTGGCCAGGCATGCGACAcgcg > 2:1052646/1‑150 (MQ=255) cctggccGCATTGAGCATGTTGATCATCCACATTGCCGGCAAGGACATCCGCGACTTGTGGGAACAGGTATGACTGCCCCGGTCAAGGCGCACGACCTTGGCTTGTGTCTGTGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGgc < 2:269849/150‑1 (MQ=255) ccGCATTGAGCATGTTGATCATCCACATTGCCGGCAAGGACATCCGCGACTTGTGGGAACAGGTATGACTGCCCCGGTCAAGGCGCACGACCTTGGCTTGTGTCTGTGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGgcgcatg < 2:1155789/150‑4 (MQ=255) cGCATTGAGCATGTTGATCATCCACATTGCCGGCAAGGACATCCGCGACTTGTGGGAACAGGTATGACTGCCCCGGTCAAGGCGCACGACCTTGGCTTGTGTCTGTGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGcac > 1:961638/1‑150 (MQ=255) gCATGTTGATCATCCACATTGCCGGCAAGGACATCCGCGACTTGTGGGAACAGGTATGACTGCCCCGGTCAAGGCGCACGACCTTGGCTTGTGTCTGTGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCaa > 2:48359/1‑150 (MQ=255) agcagaaacgcccagccacggctgatggcattggccttgcgccggtgaatgacggcgccgcaacggttgcaggtgtgcgcgccactgcgcGTGTCTGTGCCATGGCTGTGGCCAGGCATGCGACACGCGCa < 2:504406‑M1/41‑1 (MQ=255) agcagaaacgcccagccacggctgatggcattggccttgcgccggtgaatgacggcgccgcaacggttgcaggtgtgcgcgccactgcgcGTGTCTGTGCCATGGCTGTGGCCAGGCATGCGACACGCGCa > 1:504406‑M1/91‑131 (MQ=255) aTGTTGATCATCCACATTGCCGGCAAGGACATCCGCGACTTGTGGGAACAGGTATGACTGCCCCGGTCAAGGCGCACGACCTTGGCTTGTGTCTGTGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGc < 1:1040080/146‑1 (MQ=255) aTGTTGATCATCCACATTGCCGGCAAGGACATCCGCGACTTGTGGGAACAGGTATGACTGCCCCGGTCAAGGCGCACGACCTTGGCTTGTGTCTGTGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGc > 2:1040080/1‑146 (MQ=255) ttGATCATCCACATTGCCGGCAAGGACATCCGCGACTTGTGGGAACAGGTATGACTGCCCCGGTCAAGGCGCACGACCTTGGCTTGTGTCTGTGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGtt < 2:477002/150‑1 (MQ=255) tGATCATCCACATTGCCGGCAAGGACATCCGCGACTTGTGGGAACAGGTATGACTGCCCCGGTCAAGGCGCACGACCTTGGCTTGTGTCTGTGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTg < 2:9716/150‑1 (MQ=255) ccACATTGCCGGCAAGGACATCCGCGACTTGTGGGAACAGGTATGACTGCCCCGGTCAAGGCGCACGACCTTGGCTTGTGTCTGTGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGAAACCGTTGCGGCGcc > 1:108055/1‑150 (MQ=255) cGGCAAGGACATCCGCGACTTGTGGGAACAGGTATGACTGCCCCGGTCAAGGCGCACGACCTTGGCTTGTGTCTGTGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCAc > 2:720331/1‑150 (MQ=255) ggCAAGGACATCCGCGACTTGTGGGAACAGGTATGACTGCCCCGGTCAAGGCGCACGACCTTGGCTTGTGTCTGTGCCATGCCGGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCAcc > 1:1169282/1‑150 (MQ=255) ttGTGGGAACAGGTATGACTGCCCCGGTCAAGGCGCACGACCTTGGCTTGTGTCTGTGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAg < 1:724211/140‑1 (MQ=255) ttGTGGGAACAGGTATGACTGCCCCGGTCAAGGCGCACGACCTTGGCTTGTGTCTGTGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAg > 2:724211/1‑140 (MQ=255) ttGTGGGAACAGGTATGACTGCCCCGGTCAAGGCGCACGACCTTGGCTTGTGTCTGTGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCa > 2:401075/1‑150 (MQ=255) tgtgGGAACAGGTATGACTGCCCCGGTCAAGGCGCACGACCTTGGCTTGTGTCTGTGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCAt < 1:401075/150‑1 (MQ=255) tgGGAACAGGTATGACTGCCCCGGTCAAGGCGCACGACCTTGGCTTGTGTCTGTGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCATCa > 2:1141986/1‑150 (MQ=255) aCAGGTATGACTGCCCCGGTCAAGGCGCACGACCTTGGCTTGTGTCTGTGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCATCAGCCGt < 2:955442/150‑1 (MQ=255) gTATGACTGCCCCGGTCAAGGCGCACGACCGTGGCTTGTGTCTGTGCCATGTCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACCCCTGCAACCGTTGCGGCGCCGTCATTCATCGGCGCAAGGCCAATGCCATCAGCCGTGGCt > 1:755569/1‑150 (MQ=255) tATGACTGCCCCGGTCAAGGCGCACGACCTTGGCTTGTGTCTGTGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCATCAGCCGTGGCTg > 1:529767/1‑150 (MQ=255) cTGCCCCGGTCAAGGCGCACGACCTTGGCTTGTGTCTGTGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCATCAGCCGTGGCTGGGCGt > 2:844751/1‑150 (MQ=255) ccccGGTCAAGGCGCACGACCTTGGCTTGTGTCTGTGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAAt < 2:1097246/125‑1 (MQ=255) ccccGGTCAAGGCGCACGACCTTGGCTTGTGTCTGTGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAAt > 1:1097246/1‑125 (MQ=255) cccGGTCAAGGCGCACGACCTTGGCTTGTGTCTGTGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCATCAGCCGTGGCTGGGCGTTTct > 1:527340/1‑150 (MQ=255) gTCAAGGCGCACGACCTTGGCTTGTGTCTGTGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGAAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCATCAGCCGTGGCTGGGCGTTTctgctg < 2:108055/150‑1 (MQ=255) aaGGCGCACGACCTTGGCTTGTGTCTGTGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCATCAGCCGTGGCTGGGCGTTTCTGCTGGCa > 1:1162949/1‑150 (MQ=255) aGGCGCACGACCTTGGCTTGTGTCTGTGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCATCAGCCGTGGCTGGGCGTTTCTGCTGGCAg > 2:787779/1‑150 (MQ=255) gcgcACGACCTTGGCTTGTGTCTGTGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCATCAGCCGTGGCTGGGCGTTTCTGCTGGCAGcc > 2:1177067/1‑150 (MQ=255) aCGACCTTGGCTTGTGTCTGTGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCATCAGCCGTGGCTGGGCGt > 1:799703/1‑132 (MQ=255) aCGACCTTGGCTTGTGTCTGTGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCATCAGCCGTGGCTGGGCGt < 2:799703/132‑1 (MQ=255) gACCTTGGCTTGTGTCTGTGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCACAGCCATCAGCCTTTTCTGGGCGTTTCTGCTGGCAGCCCTGGtt > 2:699194/1‑150 (MQ=255) gACCTTGGCTTGTGTCTGTGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCATCAGCCGTGGCTGGGCGTTTCTGCTGGCAGCCCTGGtt < 1:48359/150‑1 (MQ=255) tGGCTTGTGTCTGTGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCATCAGCCGTGGCTGGGCGTTTCTGCTGGCAGCCCTGGTTTTCTa > 2:328928/1‑150 (MQ=255) tGGCTTGTGTCTGTGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCATCAGCCGTGGCTGGGCGTTTCTGCTGGCAGCCCTGGTTTTCTa < 1:1141986/150‑1 (MQ=255) tgcgcgtgtcgcatgcctggccacagccatggcacagacacGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCATCAGCCGTGGCTGGGCGTTTctgct > 1:504406‑M2/42‑131 (MQ=255) tgcgcgtgtcgcatgcctggccacagccatggcacagacacGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCATCAGCCGTGGCTGGGCGTTTctgct < 2:504406‑M2/90‑1 (MQ=255) tcgcatgcctggccacagccatggcacagacacGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCATCAGCCGTGGCTgg < 1:894152‑M2/79‑1 (MQ=255) tcgcatgcctggccacagccatggcacagacacGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCATCAGCCGTGGCTgg > 2:894152‑M2/34‑112 (MQ=255) tgtgCCATGGCTGTGGCCAGGCATGCGACACGGGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCATCAGCCGTGGCTGGGCGTTTCTGCTGGCAGCCCTGGTTTTCTACATCCCCGcaa > 1:1129700/1‑148 (MQ=255) tgtgCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCgg < 2:412658/80‑1 (MQ=255) tgtgCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCgg > 1:412658/1‑80 (MQ=255) tgtgCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCATCAGCCGTGGCTGGGCGTTTCTGCTGGCAGCCCTGGTTTTCTACATCCCCGCCa > 1:674926/1‑150 (MQ=255) atgcctggccacagccatggcatgcgacacGCGCAGTGACGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCATCAGCCGTGGCTGGGCGTTTCTGCTGGCAGCCCTGGTTTTCTACATCCCCGCCaa > 2:1051561‑M2/31‑150 (MQ=255) tgCCATGGCTATGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCATCAGCCGTGGCTGGGCGTTTCTGCTGGCAGCCCTGGTTTTCTACATCCCCGCCAAc > 1:102848/1‑150 (MQ=255) cATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCATCAGCCGTGGCTGGGCGTTTCTGCTgg < 2:691322/118‑1 (MQ=255) cATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCATCAGCCGTGGCTGGGCGTTTCTGCTgg > 1:691322/1‑118 (MQ=255) cATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCATCAGCCGTGGCTGGGCGTTTCTGCTGGCAGCCCTGGTTTTCTACATCCCCGCCAACctg > 1:588687/1‑150 (MQ=255) aTGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTCGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCATCAGCCGTGGCTGGGCGTTTCTGCTGGCAGCCCTGGTTTTCTACATCCCCGCCAACctgc > 2:91720/1‑150 (MQ=255) gCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCATCAGCCGTGGCTGGGCGTTTCTGCTGGCAGCCCTGGTTTTCTACATCCCCGCCAACCtgctgc > 1:96062/1‑150 (MQ=255) gtgGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCATCAGCCGTGGCTGGGCGTTTCTGCTGGCAGCCCTGGTTTTCTACATCCCCGCCAACCTGCTGCCgg < 1:721489/150‑1 (MQ=255) gtgGCCAGGCATGCGACACGCGCAGTGGCGAGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCATCAGCCGTGGCTGGGCGTTTCTGCTGGCAGCCCTGGTTTTCTACATCCCCGCCAACCTGCTGCCgg < 2:96062/150‑1 (MQ=255) tGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCATCAGCCGTGGCTGGGCGTTTCTGCTGGCAGCCCTGGTTTTCTACATCCCCGCCAACCTGCTGCCGGTGATGCACAcc > 2:981063/1‑150 (MQ=255) acacGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCATCAGCCGTGGCTGGGCGTTTCTGCTGGCAGCCCTGGTTTTCTACATCCCCGCCAACCTGCTGCCGGTGATGCACACCGaaa < 1:844751‑M2/146‑1 (MQ=255) gcgcAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCTTCAGCCGTGGCTGGGCGTTTCTGCTGGCAGCCCTGGTTTTCTACATCCCCGCCAACCTGCTGCCGGTGATGCACACCGAAATGCt > 1:424586/1‑150 (MQ=255) gcgcAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCATCAGCCGTGGCTGGGCGTTTctgc < 1:981826/89‑1 (MQ=255) gcgcAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCATCAGCCGTGGCTGGGCGTTTctgc > 2:981826/1‑89 (MQ=255) | TGCTGGCCCTGGCCGCATTGAGCATGTTGATCATCCACATTGCCGGCAAGGACATCCGCGACTTGTGGGAACAGGTATGACTGCCCCGGTCAAGGCGCACGACCTTGGCTTGTGTCTGTGCCATGGCTGTGGCCAGGCATGCGACACGCGCAGTGGCGCGCACACCTGCAACCGTTGCGGCGCCGTCATTCACCGGCGCAAGGCCAATGCCATCAGCCGTGGCTGGGCGTTTCTGCTGGCAGCCCTGGTTTTCTACATCCCCGCCAACCTGCTGCCGGTGATGCACACCGAAATGCT > NC_002947/2942910‑2943206 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |