| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3501498 = | 31 (0.690) | 14 (0.330) | 14/236 | NT | 29.0% | coding (189/192 nt) | PP_5567 | hypothetical protein |
| ? | NC_002947 | 5061301 = | 39 (0.910) | intergenic (‑420/‑71) | PP_4458/PP_4459 | opine ABC transporter substrate‑binding protein/transposase | |||||
AACCGCCGCCTGTTCAAGTTTCACAACCTGGCCAACCCCGAGCAGGAGCTGCTGCTGGAAACCTTCAAGGGCACCGAAGCCCTGTCGTGGGCGTTCAACTACGAACTGCTGCTGGTCTGCGAAGACTCCGGCGTGCCGCTCATGATGGGCTAGCAAGTCAGCATCGAAATCCAACTGGCCAAAGGCCGCTCGCGCTACATCGCATATGTTGGACAGCATAGCGCCTAGCCCAGAGCATCCTTGAGTGATGACGCAACCGGTTGGGGGACTGACTTGGGCGATTATCTGATTGGGAAAGA > NC_002947/3501349‑3501647 | gctaatggtggcagaccgaactcgtcggttcagctcaattggttcatggtcactgagcacgatgtcttgagaattcatcgctccaccccgcgtcctgtttgaccaaggaagcgtagctcaaatggaatacttatttttgagacagaacac < 2:78865‑M1/1‑1 (MQ=255)gctaatggtggcagaccgaactcgtcggttcagctcaacttgttcatcgtcactgagcacgatgtcttgagaattcatcgctccaccccgcgtcctgtttgaccaaggaagcgtagctcaaatggaatacttatttttgagacagaacac > 2:878520‑M1/150‑150 (MQ=255) taatggtggcagaccgaactcgtcggttcagctcaacttgttcatcgtcactgagcacgatgtcttgagaattcatcgctccaccccgcgtcctgtttgaccaaggaagcgtagctcaaatggaatacttatttttgagacagaacaCTa < 2:831427‑M1/3‑1 (MQ=255) tggtggcagaccgaactcgtcggttccgctcaactggttcatcgtcactgagcacgatgtcttgagaattcatcgctccaccccgcgtcctgtttgaccaaggaagcgtagctcaaatggaatacttatttttgagacagaacaCTAGCa < 1:337955‑M1/6‑1 (MQ=255) ccgccTGTTCAAGTTTCACAACCTGGCCAACCCCGAGCAGGAGCTGCTGCTGGAAACCTTCAAGGGCACTGAAGCCCTGTCGTGGGCGTTCAACTACGAACTGCTGCTGGTCTGCGAAGACTCCGGCGTGCCGCTCATGATGGGCTAGCa > 2:293040/1‑150 (MQ=255) cTGTTCAAGTTTCACAACCTGGCCAACCCCGAGCAGGAGCTGCTGCTGGAAACCTTCAAGGGCACCGAAGCCCTGTCGTGGGCGTTCAACTACGAACTGCTGCTGGTCTGCGAAGACTCCGGCGTGCCGCTCATGATGGGCTAGCAAGTc > 1:47752/1‑150 (MQ=255) ttCAAGTTTCACAACCTGGCCAACCCCGAGCAGGAGCTGCTGCTGGAAACCTTCAAGGGCACCGAAGCCCTGTCGTGGGCGTTCAACTACGAACTGCTGCTGGTCTGCGAAGACTCCGGCGTGCCGCTCATGATGGGCTAGCAAGTCAGc > 1:183604/1‑150 (MQ=255) cAAGTTTCACAACCTGGCCAACCCCGAGCAGGAGCTGCTGCTGGAAACCTTCAAGGGCACCGAAGCCCTGTCGTGGGCGTTCAACTACGAACTGCTGCTGGTCTGCGAAGACTCCGGCGTGCTGCTCATGATGGGCTAGtgtcctgtctc < 2:747093‑M1/150‑12 (MQ=255) aaGTTTCACAACCTGGCCAACCCCGAGCAGGAGCTGCTGCTGGAAACCTTCAAGGGCACCGAAGCCCTGTCGTGGGCGTTCAACTACGAACTGCTGCTGGTCTGCGAAGACTCCGGCGTGCCGCTCATGATGGGCTAGtgtcctgtctca > 2:232313‑M1/1‑138 (MQ=255) aaGTTTCACAACCTGGCCAACCCCGAGCAGGAGCTGCTGCTGGAAACCTTCAAGGGCACCGAAGCCCTGTCGTGGGCGTTCAACTACGAACTGCTGCTGGTCTGCGAAGACTCCGGCGTGCCGCTCATGATGGGCTAGCAAGTCAGCATc > 1:629548/1‑150 (MQ=255) tttCACAACCTGGCCAACCCCGAGCAGGAGCTGCTGCTGGAAACCTTCAAGGGCACCGAAGCCCTGTCGTGGGCGTTCAACTACGAACTGCTGCTGGTCTGCGAAGACTCCGGCGTGCCGCTCATGATGGGCTAGtgtcctgtctcagat > 1:1141214‑M1/1‑135 (MQ=255) cacaACCTGGCCAACCCCGAGCAGGAGCTGCTGCTGGAAACCTTCAAGGGCACCGAAGCCCTGTCGTGGGCGTTCAACTACGAACTGCTGCTGGTCTGCGAAGACTCCGGCGTGCCGCTCATGATGGGCTAGCAAGTCAGCATCGAAATc > 2:916467/1‑150 (MQ=255) aaCCTGGCCAACCCCGAGCAGGAGCTGCTGCTGGAAACCTTCAAGGGCACCGAAGCCCTGTCGTGGGCGTTCAACTACGAACTGCTGCTGGTCTGCGAAGACTCCGGCGTGCCGCTCATGATGGGCTAGtgtcctgt < 1:895330‑M1/137‑9 (MQ=255) aaCCTGGCCAACCCCGAGCAGGAGCTGCTGCTGGAAACCTTCAAGGGCACCGAAGCCCTGTCGTGGGCGTTCAACTACGAACTGCTGCTGGTCTGCGAAGACTCCGGCGTGCCGCTCATGATGGGCTAGtgtcctgt > 2:895330‑M1/1‑129 (MQ=255) aaCCTGGCCAACCCCGAGCAGGAGCTGCTGCTGGAAACCTTCAAGGGCACCGAAGCCCTGTCGTGGGCGTTCAACTACGAACTGCTGCTGGTCTGCGAAGACTCCGGCGTGCCGCTCATGATGGGCTAGCAAGTCAGCATCGAAATCCaa > 1:702224/1‑150 (MQ=255) cggttcagctcaacttgttcatcgtcactgagcacgatgtcttgagaattcatcgctccaccccgcgtcctgtttgaccaaggaagcgtagctcaaatggaatacttatttttgagacagaacaCTa > 2:1205569‑M1/125‑127 (MQ=255) cggttcagctcaacttgttcatcgtcactgagcacgatgtcttgagaattcatcgctccaccccgcgtcctgtttgaccaaggaagcgtagctcaaatggaatacttatttttgagacagaacaCTa < 1:1205569‑M1/3‑1 (MQ=255) tGGCCAACCCCGAGCAGGATCTGCTGCTGGAAACCTTCAAGGGCACCGAAGCCCTGTCGTGGGCGTTCAACTACGAACTGCTGCTGGTCTGCGAAGACTCCGGCGTGCCGCTCATGATGGGCTAGCAAGTCAGCATCGAAATCCAACTgg < 1:925497/150‑1 (MQ=255) ggCCAACCCCGAGCAGGAGCTGCTGCTGGAAACCTTCAAGGGCACCGAAGCCCTGTCGTGGGCGTTCAACTACGAACTGCTGCTGGTCTGCGAAGACTCCGGCGTGCCGCTCATGATGTGCTAGtgtcctgtctcagataaaacgttctc < 1:232313‑M1/150‑27 (MQ=255) gCCAACCCCGAGCAGGAGCTGCTGCTGGAAACCTTCAAGGGCACCGAAGCCCTGTCGTGGGCGTTCAACTACGAACTGCTGCTGGTCTGCGAAGACTCCGGCGTGCCGCTCATGATGGGCTAGCAAGTCAGCATCGAAATCCAACTGGcc > 2:92799/1‑150 (MQ=255) cAACCCCGAGCAGGAGCTGCTGCTGGAAACCTTCAAGGGCACCGAAGCCCTGTCGTGGGCGTTCAACTACGAACTGCTGCTGGTCTGCGAAGACTCCGGCGTGCCGCTCATGATGGGCTAGtgtcctgtctcagataaaacgttctcttt > 2:645209‑M1/1‑121 (MQ=255) aacttgttcatcgtcactgagcacgatgtcttgagaattcatcgctccaccccgcgtcctgtttgaccaaggaagcgtagctcaaatggaatacttatttttgagacagaacaCTAGc < 2:842232‑M1/5‑1 (MQ=255) aacttgttcatcgtcactgagcacgatgtcttgagaattcatcgctccaccccgcgtcctgtttgaccaaggaagcgtagctcaaatggaatacttatttttgagacagaacaCTAGc > 1:842232‑M1/114‑118 (MQ=255) ttgttcatcgtcactgagcacgatgtcttgagaattcatcgctccaccccgcgtcctgtttgaccaaggaagcgtagctcaaatggaatacttatttttgagacagaacaCTAGCAAGTCAGCATCGAAATCCAAc < 1:1197819‑M1/26‑1 (MQ=255) ttgttcatcgtcactgagcacgatgtcttgagaattcatcgctccaccccgcgtcctgtttgaccaaggaagcgtagctcaaatggaatacttatttttgagacagaacaCTAGCAAGTCAGCATCGAAATCCAAc > 2:1197819‑M1/111‑136 (MQ=255) gAGCAGGAGCTGCTGCTGGAAACCTTCAAGGGCACCGAAGCCCTGTCGTGGGCGTTCAACTACGAACTGCTGCTGGTCTGCGAAGACTCCGGCGTGCCGCTCATGATGGGCTAGCAAGTCAGCATCGAAATCCAACTGGCCAAAGGCCGc < 1:806393/150‑1 (MQ=255) gctgGAAACCTTCAAGGGCACCGAAGCCCTGTCGTGGGCGTTCAACTACGAACTGCTGCTGGTCTGCGAAGACTCCGGCGTGCCGCTCATGATGGGCTAGCAAGTCAGCATCGAAATCCAACTGGCCAAAgg > 1:49136/1‑132 (MQ=255) gctgGAAACCTTCAAGGGCACCGAAGCCCTGTCGTGGGCGTTCAACTACGAACTGCTGCTGGTCTGCGAAGACTCCGGCGTGCCGCTCATGATGGGCTAGCAAGTCAGCATCGAAATCCAACTGGCCAAAgg < 2:49136/132‑1 (MQ=255) gctgGAAACCTTCAAGGGCACCGAAGCCCTGTCGTGGGCGTTCAACTACGAACTGCTGCTGGTCTGCGAAGACTCCGGCGTGCCGCTCATGATGGGCTAGCAAGTCAGCATCGAAATCCAACTGGCCAAAGGCCGCTCGCGCTACATCGc < 2:629548/150‑1 (MQ=255) gatgtcttgagaattcatcgctccaccccgcgtcctgtttgaccaaggaagcgtagctcaaatggaatacttatttttgagacagaacaCTAGCAAGTCAGCATCGAAATCCAACTGGCCAAAGGCCGCTCGCGCTACATCGCATATGtt < 2:250014‑M1/61‑1 (MQ=255) cTTCAAGGGCACCGAAGCCCTGTCGTGGGCGTTCAACTACGAACTGCTGCTGGTCTGCGAAGACTCCGGCGTGCCGCTCATGATGGGCTAGCAAGTCAGCATCGAAATCCAACTGGCCAAAGGCCGCTCGCGCTACATCGCATATGTTgg > 2:1171360/1‑150 (MQ=255) ttCAAGGGCACCGAAGCCCTGTCGTGGGCGTTCAACTACGAACTGCTGCTGGTCTGCGAAGACTCCGGCGTGCCGCTCATGATGGGCTAGtgtcctgtctcagataaaacgttctctttattctcgcgtgccattgc > 2:1179645‑M1/1‑90 (MQ=255) ttCAAGGGCACCGAAGCCCTGTCGTGGGCGTTCAACTACGAACTGCTGCTGGTCTGCGAAGACTCCGGCGTGCCGCTCATGATGGGCTAGtgtcctgtctcagataaaacgttctctttattctcgcgtgccattgc < 1:1179645‑M1/137‑48 (MQ=255) gagaattcatcgctccaccccgcgtcctgtttgaccaaggaagcgtagctcaaatggaatacttatttttgagacagaacaCTAGCAAGTCAGCATCGAAATCCAACTGGCCAAAGGCCGCTCGCGCTACATCGCat > 2:483544‑M1/82‑137 (MQ=255) gagaattcatcgctccaccccgcgtcctgtttgaccaaggaagcgtagctcaaatggaatacttatttttgagacagaacaCTAGCAAGTCAGCATCGAAATCCAACTGGCCAAAGGCCGCTCGCGCTACATCGCat < 1:483544‑M1/56‑1 (MQ=255) gAAGCCCTGTCGTGGGCGTTCAACTACGAACTGCTGCTGGTCTGCGAAGACTCCGGCGTGCCGCTCATGATGGGCTAGtgtcctgtctcaga > 1:680284‑M1/1‑78 (MQ=255) gAAGCCCTGTCGTGGGCGTTCAACTACGAACTGCTGCTGGTCTGCGAAGACTCCGGCGTGCCGCTCATGATGGGCTAGtgtcctgtctcaga < 2:680284‑M1/92‑15 (MQ=255) aGCCCTGTCGTGGGCGTTCAACTACGAACTGCTGCTGGTCTGCGAAGACTCCGGCGTGCCGCTCATGATGGGCTAGtgtcctgtctcagataaaacgttctctttattctcgcgtgccattgcctctcgggcaccctggatcttgctcaa < 2:44789‑M1/150‑75 (MQ=255) gCCCTGTCGTGGGCGTTCAACTACGAACTGCTGCTGGTCTGCGAAGACTCCGGCGTGCCGCTCATGATGGGCTAGCaa < 1:1162927/78‑1 (MQ=255) gCCCTGTCGTGGGCGTTCAACTACGAACTGCTGCTGGTCTGCGAAGACTCCGGCGTGCCGCTCATGATGGGCTAGCaa > 2:1162927/1‑78 (MQ=255) ccTGTCGTGGGCGTTCAACTACGAACTGCTGCTGGTCTGCGAAGACTCCGGCGTGCCGCCCATGATGGGCTAGCAAGTCAGCATCGAAATCCAACTGGCCAAAGGCCGCTCGCGCTACATCGCATATGTTGGACAGCATAGCGCCTAGcc < 2:1094124/150‑1 (MQ=255) tGTCGTGGGCGTTCAACTACGAACTGCTGCTGGTCTGCGAAGACTCCGGCGTGCCGCTCATGATGGGCTAGtgtcctgtctcagataaaacgttctctttattctcgcgtgccattgcctctcgggcaccctggatcttgcgcaagatgt < 1:299569‑M1/150‑80 (MQ=255) gggCGTTCAACTACGAACTGCTGCTGGTCTGCGAAGACTCCGGCCTCCCGCTCATGATGGGCTAGtgtcctgtctcagataaaacgttctctttattctcgcgtgccattgcctctcgggcaccctggatcttgcgcaagatgtcttcac < 1:734728‑M1/150‑86 (MQ=255) cGTTCAACTACGAACTGCTGCTGGTCTGCGAAGACTCCGGCGTGCCGCTCATGATGGGCTAGCAAGTCAGCATCGAAATCCAACTGGCCAAAGGCCGCTCGCGCTACATCGCATATGTTGGACAGCATAGCGCCTAGCCCAGAGCATCCt < 1:1171360/150‑1 (MQ=255) gttggaccaaggaagtgtagctcaaagggaatacttatttttgggacagaacaCTAGCAAGTCAGCATCGAACGCCAACTGGCCGAAGGCCGCTCGCGCTACATCGCATATGTTGGACAGCATATCGCTTAGCCCAGAGCATCCGTGAGt > 2:453830‑M1/54‑150 (MQ=255) aaCTACGAACTGCTGCTGGTCTGCGAAGACTCCGGCGTGCCGCTCATGATGGGCTAGCAAGTCAGCATCGAAATCCAACTgg > 2:869834/1‑82 (MQ=255) aaCTACGAACTGCTGCTGGTCTGCGAAGACTCCGGCGTGCCGCTCATGATGGGCTAGCAAGTCAGCATCGAAATCCAACTgg < 1:869834/82‑1 (MQ=255) aCTACGAACTGCTGCTGGTCTGCGAAGACTCCGGCGTGCCGCTCATGATGGGCTAGtgtcctgtctcagataaaacgttctctttattctcgcgtgccatt > 2:1179136‑M1/1‑56 (MQ=255) aCTACGAACTGCTGCTGGTCTGCGAAGACTCCGGCGTGCCGCTCATGATGGGCTAGtgtcctgtctcagataaaacgttctctttattctcgcgtgccatt < 1:1179136‑M1/101‑46 (MQ=255) aCGAACTGCTGCTGGTCTGCGAAGACTCCGGCGTGCCGCTCATGATGGGCTAGCAAGTCAGCATCGAAATCCAACTGGCCAAAGGCCGCTCGCGCTACATCGCATATGTTGGACAGCATAGCGCCTAGCCCAGAGCATCCTTGAGtgatg < 2:1084111/150‑1 (MQ=255) cGAACTGCTGCTGGTCTGCGAAGACTCCGGCGTGCCGCTCATGATGGGCTAGtgtcctgtctcagctaaaacgttctctttattctcgcgtgccattgcctctcgggcaccctggat > 1:525669‑M1/1‑52 (MQ=255) cGAACTGCTGCTGGTCTGCGAAGACTCCGGCGTGCCGCTCATGATGGGCTAGtgtcctgtctcagataaaacgttctctttattctcgcgtgccattgcctctcgggcaccctggat < 2:525669‑M1/117‑66 (MQ=255) tgctgctgGTCTGCGAAGACTCCGGCGTGCCGCTCATGATGGGCTAGCAAGTCAGCATCGAAATCCAACTGGCCAAAGGCCGCTCGCGCTACATCGCATATGTTGGACAGCATAGCGCCTAGCCCAGAGCATCCTTGAGTGATGACGCaa < 1:293040/150‑1 (MQ=255) ggaagcgtagctcaaatggaatacttatttttgagacagaacaCTAGCAAGTCAGCATCGAAATCCAACTGGCCAAAGGCCGCTCGCGCTACATCGCATATGTTGGACAGCATAGCGCCTAg < 2:497754‑M1/79‑1 (MQ=255) ggaagcgtagctcaaatggaatacttatttttgagacagaacaCTAGCAAGTCAGCATCGAAATCCAACTGGCCAAAGGCCGCTCGCGCTACATCGCATATGTTGGACAGCATAGCGCCTAg > 1:497754‑M1/44‑122 (MQ=255) ctgGTCTGCGAAGACTCCGGCGTGCCGCTCATGATGGGCTAGCAAGTCAGCATCGAAATCCAACTGGCCAAAGGCCGCTCGCGCTACATCGCATATGTTGGACAGCATAGCGCCTAGCCCAGAGCATCCTTGAGTGATGACGCAACCGGt < 2:183604/150‑1 (MQ=255) gctcaaatggaatacttatttttgagacagaacaCTAGCAAGTCAGCATCGAAATCCAACTGGCCAAAGGCCGCTCGCGCTACATCGCATATGTTGGACAGCATAGCGCCTAGCCCAGAGCATCCTTGAGTGATGACGCAACCGGTTggg > 1:250014‑M1/35‑150 (MQ=255) cTGCGAAGACTCCGGCGTGCCGCTCATGATGGGCTAGCAAGTCAGCATCGAAATCCAACTGGCCAAAGGCCGCTCGCGCTACATCGCATATGTTGGACAGCATAGCGCCTAGCCCAGAGCATCCTTGAGTGATGACGCAACCGGTTgggg > 2:1019235/1‑150 (MQ=255) tGCGAAGACTCCGGCGTGCCGCTCATGATGGGCTAGCAAGTCAGCATCGAAATCCAACTGGCCAAAGGACGCTCGCGCTACATCGCATATGTTGGACAGCATAGCGCCTAGCCCAGAGCATCCTTGAGTGATGACGCAACCGGTTggggg > 2:274780/1‑150 (MQ=255) cGAAGACTCCGGCGTGCCGCTCATGATGGGCTAGCAAGTCAGCATCGAAATCCAACTGGCCAAAGGCCGCTCGCGCTACATCGCATATGTTGGACAGCATAGCGCCTAGCCCAGAGCATCCTTGAGTGATGACGCAACCGGTTGGGGgac < 1:92799/150‑1 (MQ=255) cGAAGACTCCGGCGTGCCGCTCATGATGGGCTAGCAAGTCAGCATCGAAATCCAACTGGCCAAAGGCCGCTCGCGCTACATCGCATATGTTGGACAGCATAGCGCCTAGCCCAGAGCATCCTTGAGTGATGACGCAACCGGTTGGGGgac < 2:702224/150‑1 (MQ=255) gAAGACTCCGGCGTGCCGCTCATGATGGGCTAGtgtcctgtctcagataaaacgttctctttattctcgcgtgccattgcctctcgggcaccctggatcttgcgcaagatgtcttcacctttcgcgctccagacgtaccgagagggttgg < 1:786041‑M1/150‑118 (MQ=255) gAAGACTCCGGCGTGCCGCTCATGATGGGCTAGCAAGTCAGCATCGAAATCCAACTGGCCAAAGGCCGCTCGCGCTACATCGCATATGTTGGACAGCATAGCGCCTAGCCCAGAGCATCCTTGAGTGATGACGCAACCGGTTGGGGgact > 1:636377/1‑150 (MQ=255) tggaatacttgtttttgagacagaacaCTAGCAAGTCAGCATCGAAATCCaa > 2:132204‑M1/28‑52 (MQ=255) tggaatacttgtttttgagacagaacaCTAGCAAGTCAGCATCGAAATCCaa < 1:132204‑M1/25‑1 (MQ=255) ggaatacttatttttgagacagaacaCTAGCAAGTCAGCATCGAAATCCAACTGGCCAAAGGCCGCTCGCGCTACATCGCATATGTTGGACAGCATAgcgc < 1:104249‑M1/75‑1 (MQ=255) ggaatacttatttttgagacagaacaCTAGCAAGTCAGCATCGAAATCCAACTGGCCAAAGGCCGCTCGCGCTACATCGCATATGTTGGACAGCATAgcgc > 2:104249‑M1/27‑101 (MQ=255) gaatacttatttttgagacagaacaCTAGCAAGTCAGCATCGAAATCCAACTGGCCAAAGGCCGCTCGCGCTACATCGCATATGTTGGACAGCATAGCGCCTAGCCCAGAGCATCCTTGAGTGATGACGCAACCGGTTGGGGgactgact < 1:707028‑M1/125‑1 (MQ=255) tCCGGCGTGCCGCTCATGATGGGCTAGtgtcctgtctcagataaaacgttctctttattctcgcgtgccattgcctctcgggcaccctggatcttgcgcaagatgtcttcacctttcgcgctccagacgtaccgagagggttgggcgttg > 1:1082687‑M1/1‑27 (MQ=255) tCCGGCGTGCCGCTCATGATGGGCTAGCAAGTCAGCATCGAAATCCAACTGGCCAAAg > 2:587083/1‑58 (MQ=255) tCCGGCGTGCCGCTCATGATGGGCTAGCAAGTCAGCATCGAAATCCAACTGGCCAAAg < 1:587083/58‑1 (MQ=255) cGCTCATGATGGGCTAGCAAGTCAGCATCGAAATCCAACTGGCCAAAGGCCGCTCGCGCTACATCGCATATGTTGGACAGCATAGCGCCTAGCCCAGAGCATCCTTGAGTGATGACGCAACCGGTTGGGGGACTGACTTGGGCGATTATc < 2:47752/150‑1 (MQ=255) cATGATGGGCTAGtgtcctgtctcagataaaacgttctctttattctcgcgtgccattgcctctcgggcaccctggatcttgcgcaagatgtcttcacctttcgcgctccagacgtaccgagagggttgggcgttgtgcagcgctaaaaa < 1:1111930‑M1/150‑138 (MQ=255) atgatgGGCTAGCAAGTCAGCATCGAAATCCAACTGGCCAAAGGCCGCTCGCGCTACATCGCATATGTTGGACAGCATAGCGCCTAGCCCAGAGCATCCTTGAGTGATGACGCAACCGGTTGGGGGACTGACTTGGGCGATTATCTGAtt < 1:1019235/150‑1 (MQ=255) tgatgGGCTAGtgtcctgtctcagataaaacgttctctttattctcgcgtgccattgcctctcgggcaccctggatcttgcgcaagatgtcttcacctttcgcgctccagacgtaccgagagggttgggcgttgtgcagcgctaaaaacg > 1:488557‑M1/1‑11 (MQ=255) atgGGCTAGtgtcctgtctcagctacaacgtgctctttatgctcttgtgctattgcttctcgggcaccctgtatcttgcgcaagatgtcttcacctttcgcgctccagacgtaccgagagggttgggcgttgtgcagcgctaaaacccca < 1:645209‑M1/150‑142 (MQ=255) tgGGCTAGCAAGTCAGCATCGAAATCCAACTGGCCAAAGGCCGCTCGCGCTACATCGCATATGTTGGACAGCATAGCGCCTAGCCCAGAGCATCCTTGAGTGATGACGCAACCGGTTGGGGGACTGACTTGGGCGATTATCTGATTGGGa < 2:636377/150‑1 (MQ=255) gCTAGtgtcctgtctcagataaaacgttctctttattctcgcgtgccattgcctctcgggcaccctggatcttgcgcaagatgtcttcacctttcgcaccccatacgtaccgagagggttgggcgttgtgcagcgctaaaaacgtggtaa > 1:565224‑M1/1‑5 (MQ=255) cTAGtgtcctgtctcagataaaacgttctctttattctcgcgtgccattgcctctcgggcaccctggatcttgcgcaagatgtcttcacctttcgcgctccagacgtaccgagagggttgggcgttgtgcagcgctaaaaacgtggtaat < 1:530302‑M1/150‑147 (MQ=255) | AACCGCCGCCTGTTCAAGTTTCACAACCTGGCCAACCCCGAGCAGGAGCTGCTGCTGGAAACCTTCAAGGGCACCGAAGCCCTGTCGTGGGCGTTCAACTACGAACTGCTGCTGGTCTGCGAAGACTCCGGCGTGCCGCTCATGATGGGCTAGCAAGTCAGCATCGAAATCCAACTGGCCAAAGGCCGCTCGCGCTACATCGCATATGTTGGACAGCATAGCGCCTAGCCCAGAGCATCCTTGAGTGATGACGCAACCGGTTGGGGGACTGACTTGGGCGATTATCTGATTGGGAAAGA > NC_002947/3501349‑3501647 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |