New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3525786 | 42 (0.930) | 4 (0.090) | 4/234 | NT | 9.2% | coding (189/609 nt) | lexA‑II | transcriptional repressor |
? | NC_002947 | = 3525795 | 39 (0.920) | coding (198/609 nt) | lexA‑II | transcriptional repressor |
ATCCGTGAGCGCATTGCCGAGCATGGTCAGCCGCCGAGCCTGGCCGATATCGCCACGCGCTTCGGTTTTGCCTCGCGCAGCGTTGCGCGCAAGCACATCACCGCCCTGTGCCAGGCCGGTTACATCGATGTCACGCCAAACCAGGCGCGGGGCATACGCCTGGCCGAGCCGCTGCGCCGGCCGGAAATCCTCGAAATACCCGTGCTGGGCCAGGTGGCGGCGGGTGCCCCCATCGGCCCGGACCTGGGCATCCACGAGCAGTTGCTGCTCGACCCCAGCCTGTTC > NC_002947/3525640‑3525924 | aTCCGTGAGCGCATTGCCGAGCATGGTCAGCCGCCGAGCCTGGCCGATATCGCCACGCGCTTCGGTTTTGCCTCGCGCAGCGTTGCGCGCAAGCACATCACCGCCCTGTGCCAGGCCGGTTACATCGATGTCACGCCAAACCAGGCGCgg > 1:930920/1‑150 (MQ=255) gTGAGCGCATTGCCGAGCATGGTCAGCCGCCGAGCCTGGCCGATATAGCCGCGCGCTTCGGTTTTGCCTCGCGCAGCGTTGCGCGCAAGCACATCACAGCCCTGTGCCAGGCCGGTTACCTCGATGTCACGCCAAATCAGGCGCGGGGCa > 1:432158/1‑150 (MQ=255) tGCCGAGCATGGTCAGCCGCCGAGCCTGGCCGATATCGCCACGCGCTTCGGTTTTGCCTCGCGCAGCGTTGCGCGCAAGCACATCACCGCCCTGTGCCAGGCCGGTTACATCGATGTCACGCCAAACCAGGCGCGGGGCATACGCCTGGc < 2:1064791/150‑1 (MQ=255) gAGCATGGTCAGCCGCCGAGCCTGGCCGATATCGCCACGCGCTTCGGTTTTGCCTCGCGCAGCGTTGCGCGCAAGCACATCACCGCCCTGTGCCAGGCCGGTTACATCGATGTCACGCCAAACCAGGCGCGGGGCATACGCCTGGCCGAg > 1:524495/1‑150 (MQ=255) aGCATGGTCAGCCGCCGAGCCTGGCCGATATCGCCACGCGCTTCGGTTTTGCCTCGCGCAGCGTTGCGCGCAAGCACATCACCGCCCTGTGCCACGCCGGTTACATCGATGTCACGCCAAACCAGGCGCGGGGCATACGCCTGGCCGAGc < 2:524495/150‑1 (MQ=255) cAGCCGCCGAGCCTGGCCGATATCGCCACGCGCTTCGGTTTTGCCTCGCGCAGCGTTGCGCGCAAGCACATCACCGCCCTGTGCCAGGCCGGTTACATCGATGTCACGCCAAACCAGGCGCGGGGCATACGCCTGGCCGAGCCGCTgcgc > 2:544088/1‑150 (MQ=255) gccgAGCCTGGCCGATATCGCCACGCGCTTCGGTTTTGCCTCGCGCAGCGTTGCGCGCAAGCACATCACCGCCCTGTGCCAGGCCGGTTACATCGATGTCACGCCAAACCAGGCGCGGGGCATACGCCTGGCCGAGCCGCTGCgccggcc < 2:993532/150‑1 (MQ=255) gCCTGGCCGATATCGCCACGCGCTTCGGTTTTGCCTCGCGCAGCGTTGCGCGCAAGCACATCACCGCCCTGTGCCAGGCCGGTTACATCGATGTCACGCCAAACCAGGCGCGGGGCATACGCCTGGCCGAGCCGCTGCGCCGGCCGGaaa > 2:961367/1‑150 (MQ=255) tGGCCGATATCGCCACGCGCTTCGGTTTTGCCTCGCGCAGCGTTGCGCGCAAGCACATCACCGCCCTGTGCCAGGCCGGTTACATCGGTGTCACGCCAAACCAGGCGCGGGGCATACGGATGGCCGAGACGGGTCGCCGGCCGGAAATcc > 1:61965/1‑150 (MQ=255) gATATCGCCACGCGCTTCGGTTTTGCCTCGCGCAGCGTTGCGCGCAAGCACATCACCGCCCTGTGCCAGGCCGGTTACATCGATGTCACGCCAAACCAGGCGCGGGGCATACGCCTGGCCGAGCCGCTGCGCCGGCCGGAAATCCTCGaa > 2:345474/1‑150 (MQ=255) ttCGGTTTTGCCTCGCGCAGCGTGGCGCGCAAGCACATCACCGCCCTGTGCCAGGCCGGTTACATCGATGTCACGCCAAACCAGGCGCGGGGCATACGCCTGGCCGAGCCGCTGCGCCGGCCGGAAGTCCTCGAAATACCCGTGCTGGGc > 1:1047967/1‑150 (MQ=255) ggTTTTGCCTCGCGCAGCGTTGCGCGCAAGCACATCACCGCCCTGTGCCAGGCCGGTTACATCGATGTCACGCCAAACCAGGCGCGGGGCATACGCCTGGCCGAGCCGCTGCGCCGGCCGGAAATCCTCGAAATACCCGTGCTGGGCCAg < 1:345474/150‑1 (MQ=255) tGCCTCGCGCAGCGTTGCGCGCAAGCACATCACCGCCCTGTGCCAGGCCGGTTACATCGATGTCACGCCAAACCAGGCGCGGGGCATACGCCTGGCCGAGCCGCTGCGCCGGCCGGAAATCCTCGAAATACCCGTGCTGGGCCAGGTggc < 2:527769/150‑1 (MQ=255) ccTCGCGCAGCGTTGCGCGCAAGCACATCACCGCCCTGTGCCAGGCCGGTTACATCGATGTCACGCCAAACCAGGCGCGGGGCATACGCCTGGCCGAGCCGCTGCGCCGGCCGGAAATCCTCg > 2:959192/1‑123 (MQ=255) ccTCGCGCAGCGTTGCGCGCAAGCACATCACCGCCCTGTGCCAGGCCGGTTACATCGATGTCACGCCAAACCAGGCGCGGGGCATACGCCTGGCCGAGCCGCTGCGCCGGCCGGAAATCCTCg < 1:959192/123‑1 (MQ=255) cgcgCAGCGTTGCGCGCAAGCACATCACCGCCCTGTGCCAGGCCGGTTACATCGATGTCACGCCAAACCAGGCGCGGGGCATACGCCTGGCCGAGCCGCTGCGCCGGCCGGAAATCCTCTAAATACCCGTGCTGGGCCAGGTGGcggcgg < 1:544088/150‑1 (MQ=255) cgcgCAGCGTTGCGCGCAAGCACATCACCGCCCTGTGCCAGGCCGGTTACATCGATGTCACGCCAAACCAGGCGCGGGGCATACGCCTGGCCGAGCCGCTGCGCCGGCCGGAAATCCTCGAAATACCCGTGCTGGGCCAGGTGGcggcgg < 1:168679/150‑1 (MQ=255) gcAGCGTTGCGCGCAAGCACATCACCGCCCTGTGCCAGGCCGGTTACATCGATGTCACGCCAAACCAGGCGCGGGGCATACGCCTGGCCGAGCCGCTGCGCCGGCCGGAAATCCTCGAAATACCCGTGCTGGGCCAGGTGGCGGCGGGTg > 2:1140798/1‑150 (MQ=255) aGCGTTGCGCGCAAGCACATCACCGCCCTGTGCCAGGCCGGTTACATCGATGTCACGCCAAACCAGGCGCGGGGCATACGCCTGGCCGAGCCGCTGCGCCGGCCGGAAATCCTCGAAATACCCGTGCTGGGCCAGGTGGCGGCGGGTGcc > 1:993427/1‑150 (MQ=255) ttGCGCGCAAGCACATCACCGCCCTGTGCCAGGCCGGTTACATCGATGTCACGCCAAACCAGGCGtatgccccgcgcctggtt < 2:137137‑M1/83‑19 (MQ=255) ttGCGCGCAAGCACATCACCGCCCTGTGCCAGGCCGGTTACATCGATGTCACGCCAAACCAGGCGtatgccccgcgcctggtt > 1:137137‑M1/1‑65 (MQ=255) cgcgcAAGCACATCACCGCCCTGTGCCAGGCCGGTTACATCGATGTCACGCCAAACCAGGCGCgggg > 2:775106/1‑67 (MQ=255) cgcgcAAGCACATCACCGCCCTGTGCCAGGCCGGTTACATCGATGTCACGCCAAACCAGGCGCgggg < 1:775106/67‑1 (MQ=255) gCACATCACCGCCCTGTGCCAGGCCGGTTACATCGATGTCACGCCAAACCAGGCGCGGGGCATACGCCTGGCCGAGCCGCTGCGCCGGCCGGAAATCCTCGAAATACCCGTGCTGGGCCAGGTGGCGGCGGGTGCCCCCATCGGCCCGGa > 2:1096621/1‑150 (MQ=255) caTCACCGCCCTGTGCCAGGCCGGTTACATCGATGTCACGCCAAACCAGGCGCGGGGCATACGCCTGGCCGAGCCGCTGCGCCGGCCGGAAATCCTCGAAATACCCGTGCTGGGCCAGGTGGCGGCGGGTGCCCCCATCGGCCCGGACCt > 1:303808/1‑150 (MQ=255) aCCGCCCTGTGCCAGGCCGGTTACATCGATGTCACGCCAAACCAGGCGtatgccccgcgcctggtttg < 2:768197‑M1/68‑21 (MQ=255) aCCGCCCTGTGCCAGGCCGGTTACATCGATGTCACGCCAAACCAGGCGtatgccccgcgcctggtttg > 1:768197‑M1/1‑48 (MQ=255) gCCCTGTGCCAGGCCGGTTACATCGATGTCACGCCAAACCAGGCGCGGGGCATACGCCTGGCCGAGCCGCTGCGCCGGCCGGAAATCCTCGAAATACCCGTGCTGGGCCAGGTGGCGGCGGGTGCCCCCATCGGCCCGGACCTGGGCATc < 2:102170/150‑1 (MQ=255) cccTGTGCCAGGCCGGTTACATCGATGTCACGCCAAACCAGGCGCGGGGCATACGCCTGGCCGAGCCGCTGCGCCGGCCGGAAATCCTCGAAATACCCGTGCTGGGCCAGGTGGCGGCGGGTGCCCCCATCGGCCCGGACCTg < 2:315027/143‑1 (MQ=255) cccTGTGCCAGGCCGGTTACATCGATGTCACGCCAAACCAGGCGCGGGGCATACGCCTGGCCGAGCCGCTGCGCCGGCCGGAAATCCTCGAAATACCCGTGCTGGGCCAGGTGGCGGCGGGTGCCCCCATCGGCCCGGACCTg > 1:315027/1‑143 (MQ=255) cTGTGCCAGGCCGGTTACATCGATGTCACGCCAAACCAGGCGCGGGGCATACGCCTGGCCGAGCCGCTGCGCCGGCCGGAAATCCTCGAAATACCCGTGCTGGGCCAGGTGGCGGCGGGTGCCCCCATCGGCCCGGACCTGGGCATCCAc > 2:841668/1‑150 (MQ=255) cTGTGCCAGGCCGGTTACATCGATGTCACGCCAAACCAGGCGCGGGGCATACGCCTGGCCGAGCCGCTGCGCCGGCCGGAAATCCTCGAAATACCCGTGCTGGGCCAGGTGGCGGCGGGTGCCCCCATCGGCCCGGACCTGGGCATCCAc < 2:930920/150‑1 (MQ=255) gtgCCAGGCCGGTTACATCGATGTCACGCCAAACCAGGCGCGGGGCATACGCCTGGCCGAGCCGCTGCGCCGGCCGGAAATCCTCGAAATACCCGTGCTGGGCCAGGTGGCGGCGGGTGCCCCCATCGGCCCGGACCTGGGCATCCACGa < 1:1140798/150‑1 (MQ=255) gCCAGGCCGGTTACATCGATGTCACGCCAAACCAGGCGCGGGGCATACGCCTGGCCGAGCCGCTGCGCCGGCCGGAAATCCTCGAAATACCCGTGCTGGGCCAGGTGGCGGCGGGTGCCCCCATCGGccc > 2:324060/1‑130 (MQ=255) gCCAGGCCGGTTACATCGATGTCACGCCAAACCAGGCGCGGGGCATACGCCTGGCCGAGCCGCTGCGCCGGCCGGAAATCCTCGAAATACCCGTGCTGGGCCAGGTGGCGGCGGGTGCCCCCATCGGccc < 1:324060/130‑1 (MQ=255) ttACATCGATGTCACGCCAAACCAGGCGCGGGGCATACGCCTGGCCGAGCCGCTGCGCCGGCCGGAAATCCTCGAAATACCCGTGCTGGGCCAGGTGGCGGCGGGTGCCCCCATCGGCCCGGACCTGGGCATCCACGAGCAGTTgctgct > 1:101165/1‑150 (MQ=255) aTCGATGTCACGCCCGTTCGGGCGCGGGGCATACGCCTGGCCGAGCCGCTGCGCCGGCCGGAAATCCTCGAAATACCCGTGCTGGGCCAGGTGGCGGCGGGTGCCCCCATCGGCCCGGACCTGGGCATCCACGAGCAGTTGCTGCTCGAc > 1:347224/1‑150 (MQ=255) gATGTCACGCCAAACCAGGCGCGGGGCATACGCCTGGCCGAGCCGCTGCGCCGGCCGGAAATCCTCGAAATACCCGTGCTGGGCCAGGTGGCGGCGGGTGCCCCCATCGGCCCGGACCTg > 1:517346/1‑120 (MQ=255) gATGTCACGCCAAACCAGGCGCGGGGCATACGCCTGGCCGAGCCGCTGCGCCGGCCGGAAATCCTCGAAATACCCGTGCTGGGCCAGGTGGCGGCGGGTGCCCCCATCGGCCCGGACCTg < 2:517346/120‑1 (MQ=255) gATGTCACGCCAAACCAGGCGCGGGGCATACGCCTGGCCGAGCCGCTGCGCCGGCCGGAAATCCTCGAAATACCCGTGCTGGGCCAGGTGGCGGCGGGTGCCCCCATCGGCCCGGACCTGGGCATCCACGAGCAGTTGCTGCTCGAcccc > 1:774801/1‑150 (MQ=255) gATGTCACGCCAAACCAGGCGCGGGGCATACGCCTGGCCGAGCCGCTGCGCCGGCCGGAAATCCTCGAAATACCCGTGCTGGGCCAGGTGGCGGCGGGTGCCCCCATCGGCCCGGACCTGGGCATCCACGAGCAGTTGCTGCTCGAcccc < 2:101165/150‑1 (MQ=255) gTCACGCCAAACCAGGCGCGGGGCATACGCCTGGCCGAGCCGCTGCGCCGGCCGGAAATCCTCGAAATACCCGTGCTGGGCCAGGTGGCGGCGGGTGCCCCCATCGGCCCGGACCTGGGCATCCACGAGCAGTTGCTGCTCGACCCCAGc < 1:1096621/150‑1 (MQ=255) aCGCCAAACCAGGCGCGGGGCATACGCCTGGCCGAGCCGCTGCGCCGGCCGGAAATCCTCGAAATACCCGTGCt > 2:107915/1‑74 (MQ=255) aCGCCAAACCAGGCGCGGGGCATACGCCTGGCCGAGCCGCTGCGCCGGCCGGAAATCCTCGAAATACCCGTGCt < 1:107915/74‑1 (MQ=255) gCCAAACCAGGCGCGGGGCATACGCCTGGCCGAGCCGCTGCGCCGGCCGGAAATCCTCGAAATACCCGTGCTGGGCCAGGTGGCGGCGGGTGCCCCCATCGGCCCGGACCTGGGCATCCACGAGCAGTTGCTGCTCGACCCCAGCCTGtt > 1:1110808/1‑150 (MQ=255) gCCAAACCAGGCGCGGGGCATACGCCTGGCCGAGCCGCTGCGCCGGCCGGAAATCCTCGAAATACCCGTGCTGGGCCAGGTGGCGGCGGGTGCCCCCATCGGCCCGGACCTGGGCATCCACGAGCAGTTGCTGCTCGACCCCAGCCTGtt > 1:302612/1‑150 (MQ=255) ccAAACCAGGCGCGGGGCATGCGCCTGGCCGAGCCGCTGCGCCGGCCGGAAATCCTCGAAATACCCGTGCTGGGCCAGGTGGCGGCGGGTGCCCCCATCGGCCCGGACCTGGGCATCCACGAGCAGTTGCTGCTCGACCCCAGCCTGTTc < 2:61965/150‑1 (MQ=255) ccAAACCAGGCGCGGGGCATACGCCTGGCCGAGCCGCTGCGCCGGCCGGAAATCCTCGAAATACCCGTGCTGGGCCAGGTggcg > 2:1050268/1‑84 (MQ=255) ccAAACCAGGCGCGGGGCATACGCCTGGCCGAGCCGCTGCGCCGGCCGGAAATCCTCGAAATACCCGTGCTGGGCCAGGTggcg < 1:1050268/84‑1 (MQ=255) cAAACCAGGCGCGGGGCATAcgcctggtttggcgtgacatcgatgtaaccggcctggcacagggcggt < 2:768197‑M2/68‑49 (MQ=255) cAAACCAGGCGCGGGGCATAcgcctggtttggcgtgacatcgatgtaaccggcctggcacagggcggt > 1:768197‑M2/1‑20 (MQ=255) aaCCAGGCGCGGGGCATAcgcctggtttggcgtgacatcgatgtaaccggcctggcacagggcggtgatgtgcttgcgcgcaa > 1:137137‑M2/1‑18 (MQ=255) aaCCAGGCGCGGGGCATAcgcctggtttggcgtgacatcgatgtaaccggcctggcacagggcggtgatgtgcttgcgcgcaa < 2:137137‑M2/83‑66 (MQ=255) | ATCCGTGAGCGCATTGCCGAGCATGGTCAGCCGCCGAGCCTGGCCGATATCGCCACGCGCTTCGGTTTTGCCTCGCGCAGCGTTGCGCGCAAGCACATCACCGCCCTGTGCCAGGCCGGTTACATCGATGTCACGCCAAACCAGGCGCGGGGCATACGCCTGGCCGAGCCGCTGCGCCGGCCGGAAATCCTCGAAATACCCGTGCTGGGCCAGGTGGCGGCGGGTGCCCCCATCGGCCCGGACCTGGGCATCCACGAGCAGTTGCTGCTCGACCCCAGCCTGTTC > NC_002947/3525640‑3525924 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |