New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5508216	49 (1.090)	4 (0.090)	4/236	NT	7.7%	intergenic (+22/‑228)	cycA/urtA	D‑alanine/beta‑alanine/D‑serine/glycine permease/urea ABC transporter substrate‑binding protein
	?	NC_002947	= 5508241	49 (1.140)					intergenic (+47/‑203)	cycA/urtA	D‑alanine/beta‑alanine/D‑serine/glycine permease/urea ABC transporter substrate‑binding protein

GCCTGGAGGCGGATACCCGTTCAGCACTGGTGGTGACACCGATCTGGTTTGTCGTGCTGGCGGTGACCTACCAGCTCGTACGCAGCAGGCGCCATCCCCGCACGGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCGATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGATCCAACCAACGCCCCAAGACCTCGCACAGCCCCTCTAAACCGT  >  NC_002947/5508073‑5508364                                                                                                                                                |                                                                                                                                                     gCCTGGAGGCGGATACCCGTTCAGCCCTGGTGGTGACACAGATCTGGTTTGTCGTGCTGGCGGTGACCTACCAGCTCGTCCGCAGCAGGCGCCATCCCCGCACGGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGc                                                                                                                                                >  2:569969/1‑150 (MQ=255) gCCTGGAGGCGGATACCCGTTCAGCACTGGTGGTGACACAGATCTGGTTTGTCGTGCTGGCGGTGACCTACCAGCTCGTACGCAGCAGGCGCCATCCCCGCACGGCCGTGCGTAACGACTGATGGCCTCGGGGGCTGTTCCCACGAAGGc                                                                                                                                                >  2:569967/1‑150 (MQ=255)     ggAGGCGGATACCCGTTCAGCACTGGTGGTGACACCGATCTGGTTTGTCGTGCTGGCGGTGACCTACCAGCTCGTACGCAGCAGGCGCCATCCCCGCACGGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACgg                                                                                                                                            <  1:858187/150‑1 (MQ=255)                cccGTTCAGCACTGGTGGTGACACCGATCTGGTTTGTCGTGCTGGCGGTGACCTACCAGCTCGTACGCAGCAGGCGCCATCCCCGCACGGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTc                                                                                                                                 <  1:152282/150‑1 (MQ=255)                 ccGTTCAGCACTGGTGGTGACACCGATCTGGTTTGTCGTGCTGGCGGTGACCTACCAGCTCGTACGCAGCAGGCGCCATCCCCGCACGGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTcc                                                                                                                                <  1:861610/150‑1 (MQ=255)                   gTTCAGCACTGGTGGTGACACCGATCTGGTTTGTCGTGCTGGCGATCCCCCACCAGCTCGTACGCAGCAGGCATAATCCCCGCACGGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCGa                                                                                                                              <  1:570906/150‑1 (MQ=255)                    ttCAGCACTGGTGGTGACACCGATCTGGTTTGTCGTGCTGGCGGTGACCTACCAGCTCGTACGCAGCAGGCGCCATCCCCGCACGGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCGAt                                                                                                                             <  2:359168/150‑1 (MQ=255)                       aGCACTGGTGGTGACACCGATCTGGTTTGTCGTGCTGGCGGTGACCTACCAGCTCGTACGCAGCAGGCGCCATCCCCGCACGGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCGATgtg                                                                                                                          <  1:758651‑M2/150‑4 (MQ=255)                       aGCACTGGTGGTGACACCGATCTGGTTTGTCGTGCTGGCGGTGACCTACCAGCTCGTACGCAGCAGGCGCCATCCCCGCACGGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCGATgtg                                                                                                                          >  2:55398‑M2/1‑147 (MQ=255)                        gCACTGGTGGTGACACCGATCTGGTTTGTCGTGCTGGCGGTGACCTACCAGCTCGTACGCAGCAGGCGCCATCCCCGCACGGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCGATgtgg                                                                                                                         >  2:758651‑M2/1‑146 (MQ=255)                         cACTGGTGGTGACACCGATCTGGTTTGTCGTGCTGGCGGTGACCTACCAGCTCGTACGCAGCAGGCGCCATCCCCGCACGGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACatcggacggcgtacaccgtgccttcgtggg                                                                                                                        >  2:1000926‑M1/1‑120 (MQ=255)                           cTGGTGGTGACACCGATCTGGTTTGTCGTGCTGGCGGTGACCTACCAGCTCGTACGCAGCAGGCGCCATCCCCGCACGGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACatcggacggcgtacaccgtgccttcgtgggaa                                                                                                                      <  1:417372‑M1/150‑33 (MQ=255)                            tggtggTGACACCGATCTGGTTTGTCGTGCTGGCGGTGACCTACCAGCTCGTACGCAGCAGGCGCCATCCCCGCACGGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCGATGTGGGAgc                                                                                                                     <  1:47322/150‑1 (MQ=255)                            tggtggTGACACCGATCTGGTTTGTCGTGCTGGCGGTGACCTACCAGCTCGTACGCAGCAGGCGCCATCCCCGCACGGCCGTGCGTAACGGCTGAGGGCCTCGGGGGCTGCTCCCACatcggacggcgtacaccgtgccttcgtgggaac                                                                                                                     <  2:164681‑M1/150‑34 (MQ=255)                              gtggtgACACCGATCTGGTTTGTCGTGCTGGCGGTGACCTACCAGCTCGTACGCAGCAGGCGCCATCCCCGCACGGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCGGTCCGATGTGGGAgcgc                                                                                                                   >  2:172848/1‑150 (MQ=255)                              gtggtgACACCGATCTGGTTTGTCGTGCTGGCGGTGACCTACCAGCTCGTACGCAGCAGGCGCCATCCCCGCACGGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCGATGTGGGAgcgc                                                                                                                   >  1:351914/1‑150 (MQ=255)                              gtggtgACACCGATCTGGTTTGTCGTGCTGGCGGTGACCTACCAGCTAGTACTCAGCAGGCGCCATCCCCGCACGGCCGTGCGTAACGGCTGATGGCCGCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCGATGTGGGAgcgc                                                                                                                   >  1:1124187/1‑150 (MQ=255)                               tggtgACACCGATCTGGTTTGTCGTGCTGGCGGTGACCTACCAGCTCGTACGCAGCAGGCGCCATCCCCGCACGGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCGAt                                                                                                                             <  2:593860/139‑1 (MQ=255)                               tggtgACACCGATCTGGTTTGTCGTGCTGGCGGTGACCTACCAGCTCGTACGCAGCAGGCGCCATCCCCGCACGGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCGAt                                                                                                                             >  1:593860/1‑139 (MQ=255)                                ggtgACACCGATCTGGTTTGTCGTGCTGGCGGTGACCTACCAGCTCGTACGCAGCAGGCGCCATCCCCGCACGGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCGATGTGGGAGCGccc                                                                                                                 <  2:486330/150‑1 (MQ=255)                                   gACACCGATCTGGTTTGTCGTGCTGGCGGTGACCTACCAGCTCGTACGCAGCAGGCGCCATCCCCGCACGGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACatcggacggcgtacaccgtgccttcgtgggaacagccccc                                                                                                              <  1:1000926‑M1/150‑41 (MQ=255)                                   gACACCGATCTGGTTTGTCGTGCTGGCGGTGACCTACCAGCTCGTACGCAGCAGGCGCCATCCCCGCACGGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCGATGTGGGAGCGCCCTtg                                                                                                              <  2:1165644/150‑1 (MQ=255)                                    acacCGATCTGGTTTGTCGTGCTGGCGGTGACCTACCAGCTCGTAAGCAGCAGGCGCCATCACGGCACGGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTAGGCCGTCCGCTGTGGGATCGCCCTtgt                                                                                                             >  2:99087/1‑150 (MQ=255)                                      acCGATCTGGTTTGTCGTGCTGGCGGTGACCTACCAGCTCGTACGCAGCAGGCGCCATCCCCGCACGGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCGATGTGGGAGCGCCCTTgtgt                                                                                                           >  2:211737/1‑150 (MQ=255)                                         gATCTGGTTTGTCGTACTGGCGGTGACCTACCAGCTCGTACGCAGCAGGCGCCATCCCCGCACGGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCGATGTGGGAGCGCCCTTGTGTcgc                                                                                                        <  2:299851/150‑1 (MQ=255)                                           tCTGGTTTGTCGTGCTGGCGGTGACCTACCAGCTCGTACGCAGCAGGCGCCATCCCCGCACGGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCGATGTGGGAGCGCCCTTGTGTCGCGa                                                                                                      <  2:320178/150‑1 (MQ=255)                                              ggTTTGTCGTGCTGGCGGTGACCTACCAGCTCGTACGCAGCAGGCGCCATCCCCGCACGGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCGATGTGGGAGCGCCCTTGTGTCGCGATgg                                                                                                   <  2:1043873/150‑1 (MQ=255)                                              ggTTTGTCGCGCAGGTCTTGACCTACCAGCTCGTACGCAGCAGGCGCCATCCCCGCACGGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCGATGTGGGAGCGCCCTTGTGTCGCGATgg                                                                                                   <  2:1124187/150‑1 (MQ=255)                                               gTTTGTCGTGCTGGCGGTGACCTACCAGCTCGTACGCAGCAGGCGCCATCCCCGCACGGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCGATGTGGGAGCGCCCTTGTGTCGCGATggg                                                                                                  <  1:211737/150‑1 (MQ=255)                                                tttGTCGTGCTGGCGGTGACCTACCAGCTCGTACGCAGCAGGCGCCATCCCCGCACGGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCGATGTGGGAGCGCCCTTGTGTCGCGATGGGc                                                                                                 <  2:717019/150‑1 (MQ=255)                                                  tGTCGTGCTGGCGGTGACCTACCAGCTCGTACGCAGCAGGCGCCATCCCCGCACGGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCGATGTGGGAGCGCCCTTGTGTCGCGATGGGCCg                                                                                               >  2:551627/1‑150 (MQ=255)                                                    tCGTGCTGGCGGTGACCTACCAGCTCGTACGCAGCAGGCGCCATCCCCGCACGGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCGATGTGGGAGCGCCCt                                                                                                                >  1:558167/1‑131 (MQ=255)                                                    tCGTGCTGGCGGTGACCTACCAGCTCGTACGCAGCAGGCGCCATCCCCGCACGGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCGATGTGGGAGCGCCCt                                                                                                                <  2:558167/131‑1 (MQ=255)                                                       tGCTGGCGGTGACCTACCAGCTCGTACGCAGCAGGCGCCATCCCCGCACGGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCGATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGcggtg                                                                                          >  2:941152/1‑146 (MQ=255)                                                           ggCGGTGACCTACCAGCTCGTACGCAGCAGGCGCCATCCCCGCACGGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCGATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGc                                                                                      <  2:995830/150‑1 (MQ=255)                                                                    cTACCAGCTCGTACGCAGCAGGCGCCATCCCCGCACGGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCGATGTGGGAGCGCCCTtg                                                                                                              <  1:848324/117‑1 (MQ=255)                                                                    cTACCAGCTCGTACGCAGCAGGCGCCATCCCCGCACGGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCGATGTGGGAGCGCCCTtg                                                                                                              >  2:848324/1‑117 (MQ=255)                                                                       ccAGCTCGTACGCAGCAGGCGCCATCCCCGCACGGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCGATGTGGGAGCGCCCTTGTGTCGCCATGGGCCGCACCGCGGCCCCAATCCtgtg                                                                          >  1:1247/1‑150 (MQ=255)                                                                        cAGCTCGTACGCAGCAGGCGCCATCCCCGCACGGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCGATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGc                                                                         >  1:91683/1‑150 (MQ=255)                                                                        cAGCTCGTACGCAGCAGGCGCCATCCCCGCACGGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCGATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGc                                                                         <  2:91683/150‑1 (MQ=255)                                                                            tCGTACGCAGCAGGCGCCATCCCCGCACGGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCGATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGcacac                                                                     <  1:458297/150‑1 (MQ=255)                                                                                    agcagGCGCCATCCCCGCACGGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCGATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCAt                                                             <  1:99087/150‑1 (MQ=255)                                                                                               tCCCCGCACGGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCGATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAAc                                                  <  1:551627/150‑1 (MQ=255)                                                                                                  ccGCACCGCCGTGCGTAACGCCTGATGGCCTCGCGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCGATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTg                                               <  1:576720/150‑1 (MQ=255)                                                                                                    gCACGGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCGATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGa                                             <  2:88872/150‑1 (MQ=255)                                                                                                    gCACGGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCGATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGa                                             <  2:351914/150‑1 (MQ=255)                                                                                                            gTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCGATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGATccaa                                        >  1:252016/1‑147 (MQ=255)                                                                                                            gTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCGATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGATccaa                                        <  2:252016/147‑1 (MQ=255)                                                                                                                         gATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCGATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGc                                                                                      <  2:588210/88‑1 (MQ=255)                                                                                                                         gATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCGATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGc                                                                                      >  1:588210/1‑88 (MQ=255)                                                                                                                               cTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCGATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGATCCAACCAACGCCCCAAGACCTCGcac                  >  1:554735/1‑150 (MQ=255)                                                                                                                                  gggggCTGTTCCCACGAAGGCACGGTGTACGCCGTCCGATgtgggaacagcccccgaggccatcagccgttacgcacggccgtgcggggatggcgcctgctgcgtacgagctggtaggtcaccgccagcacgacaaaccagatcggtgtc               <  1:1000926‑M2/150‑111 (MQ=255)                                                                                                                                  gggggCTGTTCCCACGAAGGCACGGTGTACGCCGTCCGATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGATCCAACCAACGCCCCAAGACCTCGCACAGc               <  1:397218/150‑1 (MQ=255)                                                                                                                                    gggCTGTTCCCACGAAGGCACGGTGCACGCCGTACGATGTTGCTCGGCCGTGCTTTCGCGATGGGCCGCACCGCGCCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGATCCAACCAACGCCCCAAGACCTCGCACAGccc             <  1:569969/150‑1 (MQ=255)                                                                                                                                    gggCTGTTCCCACGAAGGCACGGTATATGTTGTCCTTCCAGGTTGCCGCCTTGGGTCTCGATGGGCCGCACAACTGGCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGATCCAACCAACGCCCCAAGACCTCGCACAGccc             <  1:569967/150‑1 (MQ=255)                                                                                                                                     ggCTGTTCCCACGAAGGCACGGTGTCGGAGGTCTGATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGATCCAACCAACGCCCCAAGACCTCGCACAGcccc            >  1:337546/1‑150 (MQ=39)                                                                                                                                       cTGTTCCCACGAAGGCACGGTGTACGCCGTCCGATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGATCCAACCAACGCCCCAAGACCTCGCACAGCCCctc          >  2:1019941/1‑150 (MQ=255)                                                                                                                                         gTTCCCACGAAGGCACGGTGTACGCCGTCCGATgtgggagcagcccccgaggccctcagccgttacgcacggccgtgcggggatggcgcctgctgcgtacgagctggtaggtcaccgccagcacgacaaaccagatcggtgtcaccacca        <  2:164681‑M2/150‑118 (MQ=255)                                                                                                                                          ttCCCACGAAGGCACGGTGTACGCCGTCCGATgtgggaacagcccccgaggccatcagccgttacgcacggccgtgcggggatggcgcctgctgcgtacgagctggtaggtcaccgccagcacgacaaaccagatcggtgtcaccaccag       <  1:417372‑M2/150‑119 (MQ=255)                                                                                                                                            cccACGAAGGCACGGTGTACGCCGTCCGATgtgggaacagcccccgaggccatcagccgttacgcacggccgtgcggggatggcgcctgctgcgtacgagctggtaggtcaccgccagcacgacaaaccagatcggtgtcaccaccagtg     >  2:1000926‑M2/1‑30 (MQ=255)                                                                                                                                             ccACatcggacggcgtacaccgtgccttcgtgggaacagcccccgaggccatcagccgttacgcacggccgtgcggggatggcgcctgctgcgtacgagctggtaggtcaccgccagcacgacaaaccagatcggtgtcaccaccagtgc    >  2:758651‑M1/1‑4 (MQ=255)                                                                                                                                              cacatcggacggcgtacaccgtgccttcgtgggaacagcccccgaggccatcagccgttacgcacggccgtgcggggatggcgcctgctgcgtacgagctggtaggtcaccgccagcacgacaaaccagatcggtgtcaccaccagtgct   >  2:55398‑M1/1‑3 (MQ=255)                                                                                                                                              cacatcggacggcgtacaccgtgccttcgtgggaacagcccccgaggccatcagccgttacgcacggccgtgcggggatggcgcctgctgcgtacgagctggtaggtcaccgccagcacgacaaaccagatcggtgtcaccaccagtgct   <  1:758651‑M1/150‑148 (MQ=255)                                                                                                                                               aCGAAGGCACGGTGTACGCCGTCCGATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGATCCAACCAACGCCCCAAGACCTCGCACAGCCCCTCTAAACCGt  >  1:519395/1‑150 (MQ=255)                                                                                                                                               aCGAAGGCACGGTGTACGCCGTCCGATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGATCCAACCAACGCCCCAAGACCTCGCACAGCCCCTCTAAACCGt  >  1:1123022/1‑150 (MQ=255)                                                                                                                                               aCGAAGGCACGGTGTACGCCGTCCGATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGACCCACTCCTGTGCACACAAATCCATGAGGCACCAACCTGGATCCAACCAACCCGCCAAGACCACGGACAGCCCCTCTAAGCCGt  >  1:665149/1‑150 (MQ=255)                                                                                                                                                |                                                                                                                                                     GCCTGGAGGCGGATACCCGTTCAGCACTGGTGGTGACACCGATCTGGTTTGTCGTGCTGGCGGTGACCTACCAGCTCGTACGCAGCAGGCGCCATCCCCGCACGGCCGTGCGTAACGGCTGATGGCCTCGGGGGCTGTTCCCACGAAGGCACGGTGTACGCCGTCCGATGTGGGAGCGCCCTTGTGTCGCGATGGGCCGCACCGCGGCCCCAATCCTGTGCACACAAATCCATCAGGCACCAACCTGGATCCAACCAACGCCCCAAGACCTCGCACAGCCCCTCTAAACCGT  >  NC_002947/5508073‑5508364

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.