New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2908576	30 (0.660)	3 (0.070)	3/238	NT	9.0%	coding (162/1341 nt)	hasE	secretion metalloprotease
	?	NC_002947	= 2908596	32 (0.740)					coding (142/1341 nt)	hasE	secretion metalloprotease

ACTTCCTGGCCTTTCTTCACCACATCGCCTTCGCGCACCATGATCGCTTCAACGGTGCCACCGCTCAGGTGCTGGACTGCCTTTCGGTTGCTGGTGACCTTGACCGTACCGGTGGCGACCACGCCGGCGTCCAGTGGCGCCAGGCAGGACCACAGCAGGAAACCGCCGAAGCCGGCGATGACCAGCCATACGCCCCAGCGTACCGGGCGGCCCGCGTCCAGATCGATCAGGTGGCTGCTCTCGGCGGGGATCAGTTCGGCATGTTGAGTCATCTGCATGGTCGG  >  NC_002947/2908460‑2908743                                                                                                                                         |                                                                                                                                                    acTTCCTGGCCTTTCTTCACCACATCGCCTTCGCGCACCATGATCGCTTCAACGGTGCCACCGCTCAGGTGCTGGACTGCCTTTCGGTTGCTGGTGACCTTGACCGTACCGGTGGCGACCACGCCGGCGTCCAGTGGCGCCAGGCAGGAc                                                                                                                                        >  1:556272/1‑150 (MQ=255) acTTCCTGGCCTTTCTTCACCACATCGCCTTCGCGCACCATGATCGCTTCAACGGTGCCACCGCTCAGGTGCTGGACTGCCTTTCGGTTGCTGGTGACCTTGACCGTACCGGTGGCGACCACGCCGGCGTCCAGTGGCGCCAGGCAGGAc                                                                                                                                        <  2:609981/150‑1 (MQ=255)    tCCTGGCCTTTCTTCACCACATCGCCTTCGCGCACCATGATCGCTTCAACGGTGCCACCGCTCAGGTGCTGGACTGCCTTTCGGTTGCTGGTGACCTTGACCGTACCGGTGGCGACCACGCCGGCGTCCAGTGGCGCCAGGCAGGACcac                                                                                                                                     <  1:353580/150‑1 (MQ=255)      cTGGCCTTTCTTCACCACATCGCCTTCGCGCACCATGATCGCTTCAACGGTGCCACCGCTCAGGTGCTGGACTGCCTTTCGGTTGCTGGTGACCTTGACCGTACCGGTGGCGACCACGCCGGCGTCCAGTGGCGCCAGGCAGGACCAcag                                                                                                                                   >  2:111688/1‑150 (MQ=255)                  caccacATCGCCTTCGCGCACCATGATCGCTTCAACGGTGCCACCGCTCAGGTGCTGGACTGCCTTTCGGTTGCTGGTGACCTTGACCGTACCGGTGGCGACCACGCCGGCGTCCAGTGGCGCCAGGCAGGACCACAGCAGGAAAccgcc                                                                                                                       >  2:996618/1‑150 (MQ=255)                     cacaTCGCCTTCGCGCACCATGATCGCTTCAACGGTGCCACCGCTCAGGTGCTGGACTGCCTTTCGGTTGCTGGTGACCTTTACCGTACCGGTGGCGACCACGCCGGCGTCCAGTGGCGCCAGGCAGGACCACAGCAGGAAACCGCCGaa                                                                                                                    >  1:514121/1‑150 (MQ=255)                        aTCGCCTTCGCGCACCATGATCGCTTCAACGGTGCCACCGCTCAGGTGCTGGACTGCCTTTCGGTTGCTGGTGACCTTGACCGTACCGGTGGCGACCACGCCGGCGTCCAGTGGCGCCAGGCAGGACCACAGCAGGAAACCGCCGAAGcc                                                                                                                 >  1:848771/1‑150 (MQ=255)                            ccTTCGCGCACCATGATCGCTTCAACGGTGCCACCGCTCAGGTGCTGGACTGCCTTTCGGTTGCTGGTGACCTTGACCGTACCGGTGGCGACCACGCCGGCGTCCAGTGGCGCCAGGCAGGGCCACAGCAGGAAACCGCCGAAGCCGGCg                                                                                                             >  1:687467/1‑150 (MQ=255)                                       cATGATCGCTTCAACGGTGCCACCGCTCAGGTGCTGGACTGCCTTTCGGTTGCTGGTGACCTTGACCGTACCGGTGGCGACCACGCCGGCGTCCAGTGGCGCCAGGCAGGACCACAGCAGGAAACCGCCGAAGCCGGCGATGACCAGCCa                                                                                                  >  1:456177/1‑150 (MQ=255)                                               cTTCAACGGTGCCACCGCTCAGGTGCTGGACTGCCTTTCGGTTGCTGGTGACCTTGACCGTACCGGTGGCGACCACGCCGGCGTCCAGTGGCGCCAGGCAGGACCACAGCAGGAAACCGCCGAAGCCGGCGATGACCAGCCATACGcccc                                                                                          >  1:34914/1‑150 (MQ=255)                                                     cGGTGCCACCGCTCAGGTGCTGGACTGCCTTTCGGTTGCTGGTGACCTTGACCGTACCGGTGGCGACCACGCCGGCGTCCAGTGGCGCCAGGCAGGACCACAGCAGGAAACCGCCGAAGCCGGCGATGACCAGCCATACGCCCCAGCGTa                                                                                    <  2:456177/150‑1 (MQ=255)                                                                     gTGCTGGACTGCCTTTCGGTTGCTGGTGACCTTGACCGTACCGGTGGCGACCACGCCGGCGTCCAGTGGCGCCAGGCAGGGCCACAGCAGGAAACCGCCGAAGCCGGCGATGACCAGCCATACGCCCCAGCGTACCGGGCGGCCCGCGTc                                                                    <  2:687467/150‑1 (MQ=255)                                                                     gTGCTGGACTGCCTTTCGGTTGCTGGTGACCTTGACCGTACCGGTGGCGACCACGCCGGCGTCCAGTGGCGCCAGGCAGGACCACAGCAGGAAACCGCCGAAGCCGGCGATGACCAGCCATACGCCCCAGCGTACCGGGCGGCCCGCGTc                                                                    <  2:556272/150‑1 (MQ=255)                                                                          ggACTGCCTTTCGGTTGCTGGTGACCTTGACCGTACCGGTGGCGACCACGCCGGCGTCCAGTGGCGCCAGGCAGGACCACAGCAGGAAACCGCCGAAGCCGGCGATGACCAGCCATACGCCCCAGCGTACCGGGCGGCCCGCGTCCAgat                                                               <  1:111688/150‑1 (MQ=255)                                                                                ccTTTCGGTTGCTGGTGACCTTGACCGTACCGGTGGCGACCACGCCGGCGTCCAGTGGCGCCAGGCAGGACCACAGCAGGAAACCGCCGAAGCCGGCGATGACCAGCCATACGCCCCAGCGTACCGGGCGGCCCGCGTCCAGATCGATCa                                                         >  2:729721/1‑150 (MQ=255)                                                                                  tttCGGTTGCTGGTGACCTTGACCGTACCGGTGGCGACCACGCCGGCGTCCAGTGGCGCCAGGCAGGACCACAGCAGGAAACCGCCGAAGCCGGCGATGACCAGCCATACGCCCCAGCGTACCGGGCGGCCCGCGTCCAGATCGATCAgg                                                       <  2:848771/150‑1 (MQ=255)                                                                                       gTTGCTGGTGACCTTGACCGTACCGGTGGCGACCACGCCGGCGTCCAGTGGCGCCAGGCAGGACCACAGCAGGAAACCGCCGAAGCCGGCGATGACCAGCCATACGCCCCAGCGTACCGGGCGGCCCGCGTCCAgatcgat                                                           >  2:1028456/1‑141 (MQ=255)                                                                                       gTTGCTGGTGACCTTGACCGTACCGGTGGCGACCACGCCGGCGTCCAGTGGCGCCAGGCAGGACCACAGCAGGAAACCGCCGAAGCCGGCGATGACCAGCCATACGCCCCAGCGTACCGGGCGGCCCGCGTCCAgatcgat                                                           <  1:1028456/141‑1 (MQ=255)                                                                                                 aCCTTGACCGTACCGGTGGCGACCACGCCGGCGTCCAGTGGCGCCAGGCAGGACCACAGCAGGAAACCGCCGAAGCCGGCGATGACCAGCCATACGCCCCAGCGTACCGGGCGGCCCGCGTCCAGATCGATCAgg                                                       <  2:681785/135‑1 (MQ=255)                                                                                                 aCCTTGACCGTACCGGTGGCGACCACGCCGGCGTCCAGTGGCGCCAGGCAGGACCACAGCAGGAAACCGCCGAAGCCGGCGATGACCAGCCATACGCCCCAGCGTACCGGGCGGCCCGCGTCCAGATCGATCAgg                                                       >  1:681785/1‑135 (MQ=255)                                                                                                  ccTTGACCGTACCGGTGGCGACCACGCCGGCGTCCAGTGGCGCCAGGCAGGACCACAGCAGGAAACCGCCGAAGCCGGCGATGACCAGCCATACGCCCCAGCGTACCGGGCGGCCCGCGTCCAGATCGATCAGGTGGCTGCTCTcggcgg                                       <  1:729721/150‑1 (MQ=255)                                                                                                   cTTGACCGTACCGGTGGCGACCACGCCGGCGTCCAGTGGcgccaccggtacggtcaaggtcaccagcaaccgaaaggcagtccagcacctgagcggtg                                                                                          <  1:1097684‑M2/98‑60 (MQ=255)                                                                                                   cTTGACCGTACCGGTGGCGACCACGCCGGCGTCCAGTGGcgccaccggtacggtcaaggtcaccagcaaccgaaaggcagtccagcacctgagcggtg                                                                                          >  2:1097684‑M2/1‑39 (MQ=255)                                                                                                    ttGACCGTACCGGTGGCGACCACGCCGGCGTCCAGTGGcgccaccggtacggtcaaggtcaccagcaaccgaaaggcagtccagcacctgagcggtggcaccgttgaagcgatcatggtgcgcgaaggcgatgtggtgaagaaaggccag                                     <  2:263122‑M2/150‑113 (MQ=255)                                                                                                       aCCGTACCGGTGGAGACCACGCCGGCGTCCAGTGGCGCCAGGCAGGACCACAGCAGGAAACCGCCGAAGCCGGCGATGACCAGCCATACGCCCCAGCGTACCGGGCGGCCCGCGTCCAGATCGATCAGGTGGCTGCTCTCGGCGGGGATc                                  >  2:443150/1‑150 (MQ=255)                                                                                                        ccGTACCGGTGGCGACCACGCCGGCGTCCAGTGGCGCCAGGCAGGACCACAGCAGGAAACCGCCGAAGCCGGCGATGACCAGCCATACGCCCCAGCGTACCGGGCGGCCCGCGTCCAGATCGATCAGGTGGCTGCTCTCGGCGGGGATCa                                 <  1:443150/150‑1 (MQ=255)                                                                                                        ccGTACCGGTGGCGACCACGCCGGCGTCCAGTGGCGCCAGGCAGGACCACAGCAGGAAACCGCCGAAGCCGGCGATGACCAGCCATACGCCCCAGCGTACCGGGCGGCCCGCGTCCAGATCGATCAGGTGGCTGCTCTCGGCGGGGATCa                                 <  1:599954/150‑1 (MQ=255)                                                                                                         cGTACCGGTGGCGACCACGCCGGCGTCCAGTGGCGCCAGGCAGGACCACAGCAGGAAACCGCCGAAGCCGGCGATGACCAGCCATACGCCCCAGCGTACCGGGCGGCCCGCGTCCAGATCGATCAGGTGGCTGCTCTCGGCGGGGATCAg                                >  1:965478/1‑150 (MQ=255)                                                                                                                 tGGCGACCACGCCGGCGTCCAGTGGCGCCAGGCAGGACCACAGCAGGAAACCGCCGAAGCCGGCGATGACCAGCCATACGCCCCAGCGTACCGGGCGGCCCGCGTCCAGATCGATCAGGTGGCTGCTCTCGGCGGGGATCAGTTCGGCAt                        >  2:842458/1‑150 (MQ=255)                                                                                                                       ccACGCAGGCGTCCAGTGGCGCCAGGCAGGACCACAGCAGGAAACCGCCGAAGCCGGCGATGACCAGCCATACGCCCCAGCGTACCGGGCGGCCCGCGTCCAGATCGGTCAGGTGGCTGCTCTCGGCGGGGATCAGTTCGGCATGGTGAg                  <  1:996618/150‑1 (MQ=255)                                                                                                                            ccGGCGTCCAGTGGCGCCAGGCAGGACCACAGCAGGAAACCGCCGAAGCCGGCGATGACCAGCCATACGCCCCAGCGTACCGGGCGGCCCGCGTCCAGATCGATCAGGTGGCTGCTCTCGGCGGGGATCAGTTCGGCATGTTGAGTCATc             >  1:411247/1‑150 (MQ=255)                                                                                                                                 gTCCAGTGGCGCCAGGCAGGACCACAGCAGGAAACCGCCGAAGCCGGCGATGACCAGCCATACGCCCCAGCGTACCGGGCGGCCCGCGTCCAGATCGATCAGGTGGCTGCTCTCGGCGGGGATCAGTTCGGCATGTTGAGTCATCTGCAt        >  1:394043/1‑150 (MQ=255)                                                                                                                                  tCCAGTGGCGCCAGGCAGGACCACAGCAGGAAACCGCCGAAGCCGGCGATGACCAGCCATACGCCCCAGCGTACCGGGCGGCCCGCGTCCAGATCGATCAGGTGGCTGCTCTCGGCGGGGATCATTTCGGCATGTTGa                   >  1:102/1‑138 (MQ=255)                                                                                                                                  tCCAGTGGCGCCAGGCAGGACCACAGCAGGAAACCGCCGAAGCCGGCGATGACCAGCCATACGCCCCAGCGTACCGGGCGGCCCGCGTCCAGATCGATCAGGTGGCTGCTCTCGGCGGGGATCAGTTCGGCATGTTGa                   <  2:102/138‑1 (MQ=255)                                                                                                                                    cAGTGGCGCCAGGCAGGACCACAGCAGGAAACCGCCGAAGCCGGCGATGACCAGCCATACGCCCCAGCGTACCGGGCGGCCCGCGTCCAGATCGATCAGGTGGCTGCTCTCGGCGGGGATCAGTTCGGCATGTTGAGTCATCTGCATGGt     <  1:842458/150‑1 (MQ=255)                                                                                                                                     aGTGGCGCCAGGCAGGACCACAGCAGGAAACCGCCGAAGCCGGCGATGACCAGCCATACGCCCCAGCGTACCGGGCGGCCCGCGTCCAGATCGATCAGGTGGCTGCTCTCGGCGGGGATCAGTTCGGCATGTTGAGCCATCTACaagata    >  2:1036023/1‑145 (MQ=255)                                                                                                                                       tGGcgccaccggtacggtcaaggtcaccagcaaccgaaaggcagtccagcacctgagcggtggcaccgttgaagcgatcatggtgcgcgaaggcgatgtggtgaagaaaggccaggaagtggtgcgcctcgatgccctgcgtgcggtggc  >  1:263122‑M2/1‑3 (MQ=255)                                                                                                                                       tGGCGCCAGGCAGGACCACAGCAGGAAACCGCCGAAGCCGGCGATGACCAGCCATACGCCCCAGGGTACCGGGCGGCCCGCGTCCAGATCGATCAGGTGGCTGCTCTCGGCGGGGATCAGTTCGGCATGTTGAGTCATCTGCATGGTCgg  <  2:514121/150‑1 (MQ=255)                                                                                                                                         |                                                                                                                                                    ACTTCCTGGCCTTTCTTCACCACATCGCCTTCGCGCACCATGATCGCTTCAACGGTGCCACCGCTCAGGTGCTGGACTGCCTTTCGGTTGCTGGTGACCTTGACCGTACCGGTGGCGACCACGCCGGCGTCCAGTGGCGCCAGGCAGGACCACAGCAGGAAACCGCCGAAGCCGGCGATGACCAGCCATACGCCCCAGCGTACCGGGCGGCCCGCGTCCAGATCGATCAGGTGGCTGCTCTCGGCGGGGATCAGTTCGGCATGTTGAGTCATCTGCATGGTCGG  >  NC_002947/2908460‑2908743

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.