New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4237571 = | 29 (0.640) | 2 (0.050) | 4/234 | NT | 6.3% | coding (723/1122 nt) | catB | muconate cycloisomerase 1 |
? | NC_002947 | 4237600 = | 32 (0.750) | coding (694/1122 nt) | catB | muconate cycloisomerase 1 |
CGGGCCACCATTCTTGGCGATTTTCAGGGCGAAGATGCTGGCGGCGCCGTCGGCGGCCAGGCTGAAGGCGTCCTCGACGCTTTCGATCGACTCATCGGCCATGATCGGAGCCGGACTGCGCTGGTTCAGGCGCACCTG‑G‑CCAGCGCGGTTGATGCGCGAAATCGGCTGCTCGATCAGGTCGATGCCGTTGTCGCCCAATACCTGGCAGGCGCGGATGGCCTGGGACTCGTCCCAGTACTGGTTGACGTCGACCCGCACGCTGGCGCTGTCACCCAGCTCGCGCTTGATCGCGAC > NC_002947/4237454‑4237747 | cgGGCCACCATTCTTGGCGATTTTCAGGGCGAAGATGCTGGCGGCGCCGTCGGCGGCCAGGCTGAAGGCGTCCTCGACGCTTTCGATCGACTCATCGGCCATGATCGGAGCCGGACTGCGCTGGTTCAGGCGCACCTG‑G‑CCAGCGCGGtt < 1:751975/150‑1 (MQ=255) ccaTTCTTGGCGATTTTCAGGGCGAAGATGCTGGCGGCGCCGTCGGCGGCCAGGCTGAAGGCGTCCTCGACGCTTTCGATCGACTCATCGGCCATGATCGGAGCCGGACTGCGCTGGTTCAGGCGCACCTG‑G‑CCAGCGCGGTTGATgcgc < 2:519539/150‑1 (MQ=255) ccaTTCTTGGCGATTTTCAGGGCGAAGATGCTGGCGGCGCCGTCGGCGGCCAGGCTGAAGGCGTCCTCGACGCTTTCGATCGACTCATCGGCCATGATCGGAGCCGGACTGCGCTGGTTCAGGCGCACCTG‑G‑CCAGCGCGGTTGATgcgc < 1:1010126/150‑1 (MQ=255) caTTCTTGGCGATTTTCAGGGCGAAGATGCTGGCGGCGCCGTCGGCGGCCAGGCTGAAGGCGTCCTCGACGCTTTCGATCGACTCATCGGCCATGATCGGAGCCGGACTGCGCTGGTTCAGGCGCACCTG‑G‑CCAGCGCGGTTGATGcgcg > 2:36414/1‑150 (MQ=255) caTTCTTGGCGATTTTCAGGGCGAAGATGCTGGCGGCGCCGTCGGCGGCCAGGCTGAAGGCGTCCTCGACGCTTTCGATCGACTCATCGGCCATGATCGGAGCCGGACTGCGCTGGTTCAGGCGCACCTG‑G‑CCAGCGCGGTTGATGcgcg > 1:690275/1‑150 (MQ=255) gCGATTTTCAGGGCGAAGATGCTGGCGGCGCCGTCGGCGGCCAGGCTGAAGGCGTCCTCGACGCTTTCGATCGACTCATCGGCCATGATCGGAGCCGGACTGCGCTGGTTCAGGCGCACCTG‑G‑CCAGCGCGGTTGATGCGCGAAATCGgc < 2:832270/150‑1 (MQ=255) cGAAGATGCTGGCGGCGCCGTCGGCGGCCAGGCTGAAGGCGTCCTCGACGCTTTCGATCGACTCATCGGCCATGATCGGAGCCGGACTGCGCTGGTTCAGGCGCACCTG‑G‑CCAGCGCGGTTGATGCGCGAAATCGGCTGCTCGATCAGGt < 1:53776/150‑1 (MQ=255) tgggacgagtcccaggccatccgcgcctgccaggtattgggcgacaacggcatcgacctgatcgagcagccgatttcgcgcatcaaccgcgctggttcaggcgcacctggccagcgcGGTTg > 2:661837‑M2/118‑122 (MQ=255) tgggacgagtcccaggccatccgcgcctgccaggtattgggcgacaacggcatcgacctgatcgagcagccgatttcgcgcatcaaccgcgctggttcaggcgcacctggccagcgcGGTTg < 1:661837‑M2/5‑1 (MQ=255) gATGCTGGCGGCGCCGTCGGCGGCCAGGCTGAAGGCGTCCTCGACGCTTTCGATCGACTCATCGGCCATGATCGGAGCCGGACTGCGCTGGTTCAGGCGCACCTG‑G‑CCAGCGCGGTTGATGCGCGAAATCGGCTGCTCGATCAGGTCGAt < 2:1054071/150‑1 (MQ=255) cTGGCGGCGCCGTCGGCGGCCAGGCTGAAGGCGTCCTCGACGCTTTCGATCGACTCATCGGCCATGATCGGAGCCGGACTGCGCTGGTTCAGGCGCACCTG‑G‑CCAGCGCGGTTGATGCGCGAAATCGGCTGCTCGATCAGGTCGATGCCg < 1:890451/150‑1 (MQ=255) cGTCGGCGGCCAGGCTGAAGGCGTCCTCGACGCTTTCGATCGACTCATCGGCCATGATCGGAGCCGGACTGCGCTGGTTCAGGCGCACCTG‑G‑CCAGCGCGGTTGATGCGCGAAATCGGCTGCTCGATCAGGTCGATGCCGTTGTCGCCCa > 1:45345/1‑150 (MQ=255) tCGGCGGCCAGGCTGAAGGCGTCCTCGACGCTTTCGATCGACTCATCGGCCATGATCGGAGCCGGACTGCGCTGGTTCAGGCGCACCTG‑G‑CCAGCGCGGTTGATGCGCGAAATCGGCTGCTCGATCAGGTCGATGCCGTTGTCGCCCAAt < 1:895415/150‑1 (MQ=255) ggcggcCAGGCTGAAGGCGTCCTCGACGCTTTCGATCGACTCATCGGCCATGATCGGAGCCGGACTGCGCTGGTTCAGGCGCACCTG‑G‑CCAGCGCGGTTGATGCGCGAAATCGGCTGCTCGATCAGGTCGATGCCGTTGTCGCCCAATAc < 2:400844/150‑1 (MQ=255) ggcCAGGCTGAAGGCGTCCTCGACGCTTTCGATCGACTCATCGGCCATGATCGGAGCCGGACTGCGCTGGTTCAGGCGCACCTG‑G‑CCAGCGCgg > 1:550449/1‑94 (MQ=255) ggcCAGGCTGAAGGCGTCCTCGACGCTTTCGATCGACTCATCGGCCATGATCGGAGCCGGACTGCGCTGGTTCAGGCGCACCTG‑G‑CCAGCGCgg < 2:550449/94‑1 (MQ=255) tGAAGGCGTCCTCGACGCTTTCGATCGACTCATCGGCCATGATCGGAGCCGGACTGCGCTGGTTCAGGCGCACCTG‑G‑CCAGCGCGGTTGATGCGCGAAATCGGCTGCTCGATCAGGTCGATGCCGTTGTCGCCCAATACCTGGCAGgcgc > 1:562043/1‑150 (MQ=255) gAAGGCGTCCTCGACGCTTTCGATCGACTCATCGGCCATGATCGGAGCCGGACTGCGCTGGTTCAGGCGCACCTG‑G‑CCAGCGCGGTTGATGCGCGAAATCGGCTGCTCGATCAGGTCGATGCCGTTGTCGCCCAATACCTGGCAGGcgcg > 2:429068/1‑150 (MQ=255) ttCGATCGACTCATCGGCCATGATCGGAGCCGGACTGCGCTGGTTCAGGCGCACCTG‑G‑CCAGCGCGGTTGATGCGCGAAATCGGCTGCTCGATCAGGTCGATGCCGTTGTCGCCCAATACCTGGCAGGCGCGGATGGCCTGGGACTCGTc < 2:45345/150‑1 (MQ=255) tcgaCTCATCGGCCATGATCGGAGCCGGACTGCGCTGGTTCAGGCGCACCTG‑G‑CCAGCGCGGTTGATGCGCGAAATCGGCTGCTCGATCAGGTCGATGCCGTTGTCGCCCAATACCTGGCAGGCGCGGATGGCCTGGGACGAGTCCCAgg < 2:690275/150‑2 (MQ=255) tCATCGGCCATGATCGGAGCCGGACTGCGCTGGTTCAGGCGCACCTG‑G‑CCAGCGCGGTTGATGCGCGAAATCGgctgct < 2:1185081/79‑1 (MQ=255) tCATCGGCCATGATCGGAGCCGGACTGCGCTGGTTCAGGCGCACCTG‑G‑CCAGCGCGGTTGATGCGCGAAATCGgctgct > 1:1185081/1‑79 (MQ=255) aTCGGCCATGATCGGAGCCGGACTGCGCTGGTTCAGGCGCACCTG‑G‑CCAGCGCGGTTGATGCGCGAAATCGGCTGCTCGATCAGGt > 2:415507/1‑86 (MQ=255) aTCGGCCATGATCGGAGCCGGACTGCGCTGGTTCAGGCGCACCTG‑G‑CCAGCGCGGTTGATGCGCGAAATCGGCTGCTCGATCAGGt < 1:415507/86‑1 (MQ=255) aTCGGCCATGATCGGAGCCGGACTGCGCTGGTTCAGGCGCACCTG‑G‑CCAGCGCGGTTGATGCGCGAAATCGGCTGCTCGATCAGGTCGATGCCGTTGTCGCCCAATACCTGGCAGGCGCGGATGGCCTGGGACTCGTCCCAGTACTgg > 1:1017605/1‑148 (MQ=255) aTCGGCCATGATCGGAGCCGGACTGCGCTGGTTCAGGCGCACCTG‑G‑CCAGCGCGGTTGATGCGCGAAATCGGCTGCTCGATCAGGTCGATGCCGTTGTCGCCCAATACCTGGCAGGCGCGGATGGCCTGGGACTCGTCCCAGTACTgg < 2:1017605/148‑1 (MQ=255) cATGATCGGAGCCGGACTGCGCTGGTTCAGGCGCACCTG‑G‑CCAGCGCGGTTGATGCGCGAAATCGGCTGCTCGATCAGGTCGATGCCGTTGTCGCCCAATACCTGGCAGGCGCGGATGGCCTGGGACTCGTCCCAGTACTGGTTGACGTc > 1:1087464/1‑150 (MQ=255) aTGATCGGAGCCGGACTGCGCTGGTTCAGGCGCACCTG‑G‑CCAGCGCGGTTGATGCGCGAAATCGGCTGCTCGATCAGGTCGATGCCGTTGTCGCCCAATACCTGGCAGGCGCGGATGGCCTGGGACTCGTCCCAGTACTGGTTGACGTCg > 2:154151/1‑150 (MQ=255) ggAGCCGGACTGCGCTGGTTCAGGCGCACCTG‑G‑CCAGCGCGGTTGATGCGCGAAATCGGCTGCTCGATCAGGTCGATGCCGTTGTCGCCCAATACCTGGCAGGCGCGGATGGCCTGGGACTCGTCCCAGTACTGGTTGACGTCGACCCGc < 1:36414/150‑1 (MQ=255) caaccGCGCTGGC‑CAGGTGCGCCTGAA‑CCAGCGCGGTTGATGCGCGAAATCGGCTGCTCGATCAGGTCGATGCCGTTGTCGCCCAATACCTGGCAGGCGCGGATGGCCTGGGACTCGTCCCa > 2:661837‑M1/6‑122 (MQ=255) caaccGCGCTGGC‑CAGGTGCGCCTG‑AACCAGCGCGGTTGATGCGCGAAATCGGCTGCTCGATCAGGTCGATGCCGTTGTCGCCCAATACCTGGCAGGCGCGGATGGCCTGGGACTCGTCCCa < 1:661837‑M1/117‑1 (MQ=255) gACTGCGCTGGTTCAGGCGCACCTG‑G‑CCAGCGCGGTTGATGCGCGAAATCGGCTGCTCGATCAGGTCGATGCCGTTGTCGCCCAATACCTGGCAGGCGCGGATGGCCTGGGACTCGTCCCAGTACTGGTTGACGTCGACCCGCACGCTgg > 1:533747/1‑150 (MQ=255) aCTGCGCTGGTTCAGGCGCACCTG‑G‑CCAGCGCGGTTGATGCGCGAAATCGGCTGCTCGATCAGGTCGATGCCGTTGTCGCCCAATACCTGGCAGGCGCGGATGGCCTGGGACTCGTCCCAGTACTGGTTGACGTCGACCCGCACGCTGgc < 2:562043/150‑1 (MQ=255) tGCGCTGGTTCAGGCGCACCTG‑G‑CCAGCGCGGTTGATGCGCGAAATCGGCTGCTCGATCAGGTCGATGCCGTTGTCGCCCAATACCTGGCAGGCGCGGATGGCCTGGGACTCGTCCCAGTACTGGTTGACGTCGACCCGCACGCTGgcgc > 1:35858/1‑150 (MQ=255) gcgctggccaggtgcgcctgaaccagcgcGGTTGATGCGCGAAATCGGCTGCTCGATCAGGTCGATGCCGTTGTCGCCCAATACCTGGCAGGCGCGGATGGCCTgg < 2:1191495‑M2/77‑1 (MQ=255) gcgctggccaggtgcgcctgaaccagcgcGGTTGATGCGCGAAATCGGCTGCTCGATCAGGTCGATGCCGTTGTCGCCCAATACCTGGCAGGCGCGGATGGCCTgg > 1:1191495‑M2/30‑106 (MQ=255) gcACCTG‑G‑CCAGCGCGGTTGATGCGCGAAATCGGCTGCTCGATCAGGTCGATGCCGTTGTCGCCCAATACCTGGCAGGCGCGGATGGCCTGGGACTCGTCCCAGTACTGGTTGACGt < 2:492305/117‑1 (MQ=255) gcACCTG‑G‑CCAGCGCGGTTGATGCGCGAAATCGGCTGCTCGATCAGGTCGATGCCGTTGTCGCCCAATACCTGGCAGGCGCGGATGGCCTGGGACTCGTCCCAGTACTGGTTGACGt > 1:492305/1‑117 (MQ=255) gcACCTG‑G‑CCAGCGCGGTTGATGCGCGAAATCGGCTGCTCGATCAGGTCGATGCCGTTGTCGCCCAATACCTGGCAGGCGCGGATGGCCTGGGACTCGTCCCAGTACTGGTTGACGTCGACCCGCACGCTGGCGCTGTCa < 2:224454/140‑1 (MQ=255) gcACCTG‑G‑CCAGCGCGGTTGATGCGCGAAATCGGCTGCTCGATCAGGTCGATGCCGTTGTCGCCCAATACCTGGCAGGCGCGGATGGCCTGGGACTCGTCCCAGTACTGGTTGACGTCGACCCGCACGCTGGCGCTGTCa > 1:224454/1‑140 (MQ=255) aCCTG‑G‑CCAGCGCGGTTGATGCGCGAAATCGGCTGCTCGATCAGGTCGATGCCGTTGTCGCCCAATACCTGGCAGGCGCGGATGGCCTGGGACTCGTCCCAGTACTGGTTGACGTCGACCCGCACGCTGGCGCTGTCACCCAGCTCgcgc < 1:429068/150‑1 (MQ=255) ccTG‑G‑CCAGCGCGGTTGATGCGCGAAATCGGCTGCTCGATCAGGTCGATGCCGTTGTCGCCCAATACCTGGCAGGCGCGGATGGCCTGGGACTCGTCCCAGTACTGGTTGACGTCGACCCGCACGCTGGCGCTGTCACCCAGCTCGCGCt > 1:227313/1‑150 (MQ=255) agcgcGGTTGATGCGCGAAATCGGCTGCTCGATCAGGTCGATGCCGTTGTCGCCCAATACCTGGCAg > 2:58466‑M2/6‑67 (MQ=255) agcgcGGTTGATGCGCGAAATCGGCTGCTCGATCAGGTCGATGCCGTTGTCGCCCAATACCTGGCAg < 1:58466‑M2/62‑1 (MQ=255) agcgcGGTTGATGCGCGAAATCGGCTGCTCGATCAGGTCGATGCCGTTGTCGCCCAATACCTGGCAGGCGCGGATGGCCTGGGACTCGTCCCAGTACTGGTTGACGTCGACCCGCACGCTGGCGCTGTCACCCAGCTCGCGCTTGATcgc < 2:533747‑M2/145‑1 (MQ=255) gcGGTTGATGCGCGAAATCGGCTGCTCGATCAGGTCGATGCCGTTGTCGCCCAATACCTGGCAGGCGCGGATGGCCTGGGACTCGTCCCAGTACTGGTTGACGTCGACCCGCACGCTg < 2:161196‑M2/116‑1 (MQ=255) gcGGTTGATGCGCGAAATCGGCTGCTCGATCAGGTCGATGCCGTTGTCGCCCAATACCTGGCAGGCGCGGATGGCCTGGGACTCGTCCCAGTACTGGTTGACGTCGACCCGCACGCTg > 1:161196‑M2/3‑118 (MQ=255) gcGGTTGATGCGCGAAATCGGCTGCTCGATCAGGTCGATGCCGTTGTCGCCCAATACCTGGCAGGCGCGGATGGCCTGGGACTCGTCCCAGTACTGGTTGACGTCGACCCGCACGCTGGCGCTGTCACCCAGCTCGCGCTTGATCGCGAc < 1:154151‑M2/148‑1 (MQ=255) | CGGGCCACCATTCTTGGCGATTTTCAGGGCGAAGATGCTGGCGGCGCCGTCGGCGGCCAGGCTGAAGGCGTCCTCGACGCTTTCGATCGACTCATCGGCCATGATCGGAGCCGGACTGCGCTGGTTCAGGCGCACCTG‑G‑CCAGCGCGGTTGATGCGCGAAATCGGCTGCTCGATCAGGTCGATGCCGTTGTCGCCCAATACCTGGCAGGCGCGGATGGCCTGGGACTCGTCCCAGTACTGGTTGACGTCGACCCGCACGCTGGCGCTGTCACCCAGCTCGCGCTTGATCGCGAC > NC_002947/4237454‑4237747 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |