New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 4593801 =74 (1.640)4 (0.110) 4/202 NT 6.6% intergenic (+61/+238) mccA/PP_4068 methylcrotonyl‑CoA carboxylase biotin‑containing subunit alpha/Cro/CI family transcriptional regulator
?NC_002947 4593905 = 53 (1.440)intergenic (+165/+134) mccA/PP_4068 methylcrotonyl‑CoA carboxylase biotin‑containing subunit alpha/Cro/CI family transcriptional regulator

TTTGCGGCCCTAACGCAACACAAGGCCGCCCCTGCAACAGCCCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGGCCTGCTGGCCAATCTCTACCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCGGGGGTGGACACATGTTGGTGATTAGGCGCAGGCCGCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAACTTCCACCCGCCGTTCACCGTTGCCGCCACTACTCAAACCCTTTCAAAAAGCCCCA  >  NC_002947/4593758‑4594051
                                                                                                                                                   |                                                                                                                                                  
tttGCGGCCCTAACGCAACACAAGGCCGCCCCTGCAACAGCCCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGGCCTGCTGGCCAATCTCTACCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATc                                                                                                                                                  <  1:749848/150‑1 (MQ=255)
    cGGCCCTAACGCAACACAAGGCCGCCCCTGCAACAGCCCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGGCCTGCTGGCCAATCTCTACCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGAt                                                                                                                                              >  1:727690/1‑150 (MQ=255)
    cGGCCCTAACGAACCAAAAGGCCACACCTGCCACCGCTCGTAGCAGCTGGTTTACCCGCGAAAGGGCCGGGCCTGCTGGCCAATCTCTACCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGAt                                                                                                                                              <  2:315983/150‑1 (MQ=17)
      gCCCTAACGCAACACAAGGCCGCCCCTGCAACAGCCCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGGCCTGCTGGCCAATCTCTACCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATc                                                                                                                                                  <  1:351153/144‑1 (MQ=255)
      gCCCTAACGCAACACAAGGCCGCCCCTGCAACAGCCCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGGCCTGCTGGCCAATCTCTACCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATc                                                                                                                                                  >  2:351153/1‑144 (MQ=255)
      gCCCTAACGCAACACAAGGCCGCCCCTGCAACAGCCCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGGCCTGCTGGCCAATCTCTACCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCg                                                                                                                                            <  1:567319/150‑1 (MQ=255)
       cccTAACGCAACACAAGGCCGCCCCTGCAACAGCCCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGGCCTGCTGGCCAATCTCTCCCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCgg                                                                                                                                           <  1:464700/150‑1 (MQ=255)
       cccTAACGCAACACAAGGCCGCCCCTGCAACAGCCCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGGCCTGCTGGCCAATCTCTACCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCgg                                                                                                                                           <  2:112653/150‑1 (MQ=255)
       cccTAACGCAACACAAGGCCGCCCCTGCAACAGCCCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGGCCTGCTGGCCAATCTCTACCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCgg                                                                                                                                           >  1:417798/1‑150 (MQ=255)
        ccTAACGCAACACAAGGCCGCCCCTGCAACAGCCCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGGCCTGCTGGCCAATCTCTACCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCggg                                                                                                                                          >  2:494596/1‑150 (MQ=255)
        ccTAACGCAACACAAGGCCGCCCCTGCAACAGCCCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGGCCTGCTGGCCAATCTCTACCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCggg                                                                                                                                          <  1:1048857/150‑1 (MQ=255)
         cTAACGCAACACAAGGCCGCCCCTGCAACAGCCCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGGCCTGCTGGCCAATCTCTACCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCgggg                                                                                                                                         <  2:551556/150‑1 (MQ=255)
         cTAACGCAACACAAGGCCGCCCCTGCAACAGCCCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGGCCTGCTGGCCAATCTCTACCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCgggg                                                                                                                                         <  2:727690/150‑1 (MQ=255)
         cTAACGCAACACAAGGCCGCCCCTGCAACAGCCCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGGCCTGCTGGCCAATCTCCACCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCgggg                                                                                                                                         >  2:836184/1‑150 (MQ=255)
              gCAACACAAGGCCGCCCCTGCAACAGCCCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGGCCTGCTGGCCAATCTCTACCCGTCGCTCACCATTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCGGGGGTGGa                                                                                                                                    >  1:353817/1‑150 (MQ=255)
                 acacAAGGCCGCCCCTGCAACAGCCCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGGCCTGCTGGCCAATCTCTACCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCGGGGGTGGacac                                                                                                                                 <  1:494596/150‑1 (MQ=255)
                     aaGGCCGCCCCTACAACAGCCCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGGCCTGCTGGCCAATCTCTACCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCGGGGGTGAACACAtat                                                                                                                             >  1:119495/1‑148 (MQ=255)
                       ggCCGCCCCTGCAACAGCCCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGGCCTGCTGGCCAATCTCTACCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCGGGGGTGGACACATGTTg                                                                                                                           <  2:890051/150‑1 (MQ=255)
                        gcngccCCTGCAACAGCCCGTAGGAGCNGGTTTACCCGCGNAAGGGCNGNGCCTGCTGGCCAATCTCTACCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCGGGGGTGGACACATGTTgg                                                                                                                          >  1:856586/1‑150 (MQ=255)
                        gccgccCCTGCAACAGCCCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGGCCTGCTGGCCAATCTCTACCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCGGGGGTGGACACATGTTgg                                                                                                                          <  1:780573/150‑1 (MQ=255)
                          cgccCCTCCAACAGCCCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGGCCTGCTGGCCAATCTCTACCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCGGGGGTGGACACATGTTGGTg                                                                                                                        <  1:562187/150‑1 (MQ=255)
                               cTGCAACAGCCCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGGCCTGCTGGCCAATGTCTACCCGTCGCTCACCGTTGCCGCCGCTACCGATCTGGCGGTTAAACTCCCTCCTACCAGCGATGGAGGGCGGACGCATGTCGGTGAttcg                                                                                                                   >  1:423451/1‑148 (MQ=17)
                               cTGCAACAGCCCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGGCCTGCTGGCCAATCTCTACCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCGGGGGTGGACACATGTTGGTGATTAg                                                                                                                   <  2:856586/150‑1 (MQ=255)
                                   aaCAGCCCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGGCCTGCTGGCCAATCTCTACCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCGGGGGTGGACACATGTTGGTGATTAGgcgc                                                                                                               >  1:1157179/1‑150 (MQ=255)
                                    aCAGCCCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGGCCTGCTGGCCAATCTCTACCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCGGGGGTGGACACATGTTGGTGATTAGGCGCa                                                                                                              >  2:1138413/1‑150 (MQ=255)
                                     cAGCCCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGGCCTGCTGGCCAATCTCTACCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGa                                                                                                                                               <  2:555752/116‑1 (MQ=255)
                                     cAGCCCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGGCCTGCTGGCCAATCTCTACCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGa                                                                                                                                               >  1:555752/1‑116 (MQ=255)
                                     cAGCCCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGGCCTGCTGGCCAATCTCTACCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCGGGGGTGGACACATGTTGGTGATTAGGCGCAg                                                                                                             >  2:8141/1‑150 (MQ=255)
                                        cccGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGGCCTGCTGGCCAATCTCTACCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGCTAAACCCGCTCCTACATCCGATCGGGGGCGGACACATGTTGGTGATTAGGCGCCGGcc                                                                                                          >  1:892664/1‑150 (MQ=255)
                                          cGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGGCCTGCTGGCCAATCTCTACCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCGGGGGTGGACACATGTTGGTGATTAGGCGCAGGCcgc                                                                                                        <  1:1138413/150‑1 (MQ=255)
                                          cGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGGCCTGCTGGCCAATCTCTACCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCGGGGGTGGACACATGTTGGTGATTAGGCGCAGGCcgc                                                                                                        <  1:1162562/150‑1 (MQ=255)
                                            TAGGAGCGGGTTTACCCGCGAAAGGGCCGGGCCTGCTGGCCAATCTCTACCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCGGGGGTGGACACATGTTGGTGATTAGGCGCAGGCCGCgt                                                                                                      >  2:1157179‑M1/1‑150 (MQ=255)
                                            TAGGAGCGGGTTTACCCGCGAAAGGGCCGGGCCTGCTGGCCAATCTCTACCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCGGGGGTGGACACATGTTGGTGATTAGGCGCAGGCCGCgt                                                                                                      >  1:7897‑M1/1‑150 (MQ=255)
                                               GAGCGGGTTTACCCGCGAAAGGGCCGGGCCTGCTGGCCAATCTCTACCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCGGGGGTGGACACATGTTGGTGATTAGGCGCAGGCCGCGTGTa                                                                                                   >  2:417798‑M1/1‑150 (MQ=255)
                                                AGCGGGTTTACCCGCGAAAGGGCCGGGCCTGCTGGCCAATCTCTACCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCGGGGGTGGACACATGTTGGTGATTAGGCGCAGGCCGCGTGTAg                                                                                                  >  1:8141‑M1/1‑150 (MQ=255)
                                                 GCGGGTTTACCCGCGAAAGGGCCGGGCCTGCTGGCCAATCTCTACCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGTTCGGGGGTGGACACATGTTGGTGATTAGGCGCAGGCCGCGTGTAgg                                                                                                 <  1:378297‑M1/150‑1 (MQ=255)
                                                 GCGGGTTTACCCGCGAAAGGGCCGGGCCTGCTGGCCAATCTCTACCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCGGGGGTGGACACATGTTGGTGATTAGGCGCAGGCCGCGTGTAgg                                                                                                 <  2:1050572‑M1/150‑1 (MQ=255)
                                                  CGGGTTTACCCGCGAAAGGGCCGGGCCTGCTGGCCAATCTCTACCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCGGGGGTGGACACATGTTGGTGATTAGGCGCAGGCCGCGTGTAGGa                                                                                                >  1:721562‑M1/1‑150 (MQ=255)
                                                    GGTTTACCCGCGAAAGGGCCGGGCCTGCTGGCCAATCTCTACCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCGGGGGTGGACACATGTTGGTGATTAGGCGCAGGCCGCGTGTAGGAGc                                                                                              >  2:1081179‑M1/1‑150 (MQ=255)
                                                     GTTTACCCGCGAAAGGGCCGGGCCTGCTGGCCAATCTCTACCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCGGGGGTGGACACATGTTGGTGATTAGGCGCAGGCCGCGTGTaggaacg                                                                                             <  1:46452‑M1/150‑4 (MQ=255)
                                                     GTTTACCCGCGAAAGGGCCGGGCCTGCTGGCCAATCTCTACCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCGGGGGTGGACACATGTTGGTGATTAGGCGCAGGCCGCGTGTAGGAGCg                                                                                             <  1:217097‑M1/150‑1 (MQ=255)
                                                      tttacccgcgaatacggtagcggcggcaacggtgagcgacgggtagagattggccagcaggcccggccctttcgcgggtaaacccgctcctacATCCGATCGGGGGTGGACACATGtt                                                                                                                            <  2:321410‑M2/25‑1 (MQ=255)
                                                      tttacccgcgaatacggtagcggcggcaacggtgagcgacgggtagagattggccagcaggcccggccctttcgcgggtaaacccgctcctacATCCGATCGGGGGTGGACACATGtt                                                                                                                            >  1:321410‑M2/94‑118 (MQ=255)
                                                      TTTACCCGCGAAAGGGCCGGGCCTGCTGGCCAATCTCTACCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCGGGGGTGGACACATGTTGGTGATTAGGCGCAGGCCGCGTGTAGGAGCgg                                                                                            <  1:680374‑M1/150‑1 (MQ=255)
                                                       TTACCCGCGAAAGGGCCGGGCCTGCTGGCCAATCTCCACCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCGGGGGTGGACACATGTTGGTGATTAGGCGCAGGCCGCGTGTAGGAGCggg                                                                                           >  1:836184‑M1/1‑150 (MQ=255)
                                                           ccgcgaatacggtagcggcggcaacggtgagcgacgggtagagattggccagcaggcccggccctttcgcgggtaaacccgctcctacATCCGATCGGGGGTGGACACATGTTGGTGATTAGgc                                                                                                                 <  2:255581‑M2/36‑1 (MQ=255)
                                                           ccgcgaatacggtagcggcggcaacggtgagcgacgggtagagattggccagcaggcccggccctttcgcgggtaaacccgctcctacATCCGATCGGGGGTGGACACATGTTGGTGATTAGgc                                                                                                                 >  1:255581‑M2/89‑124 (MQ=255)
                                                              CGAAAGGGCCGGGCCTGCTGGCCAATCTATACACCTGCCTCAGGTTTGCTGCCGCTACCGTATTCGCGGGTAATCCCGCTCCTACATCCGATCGGGGGTGGACACATGTTGGTGATTAGGCGCAGGCCGCGTGTAGGAGCGGGTTTAccc                                                                                    >  1:1172705‑M1/1‑150 (MQ=255)
                                                               gagaGGGCCGGGCCTGCTGGCCAATCTCTACCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCCCCTACATCCGATCGGGGGTGGACACATGTTGGTGATTAGGCGCAGGCCGCGTGTAGGAGCGGGTTTACCcg                                                                                   <  2:505083/147‑1 (MQ=255)
                                                                AAAGGGCCGGGCCTGCTGGCCAATCTCTACCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCGGGGGTGGACACATGTTGGTGATTAGGCGCAGGCCGCGTGTAGGAGCGGGTTTACCcgc                                                                                  <  1:506618‑M1/150‑1 (MQ=255)
                                                                 AAGGGCCGGGCCTGCTGGCCAATCTCTACCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCGGGGGTGGACACATGTTGGTGATTAGGCGCAGGCCGCGTGTAGGAGCGGGTTTACCcgcg                                                                                 <  1:612222‑M1/150‑1 (MQ=255)
                                                                  aGGGCCGGGCCTGCTGGCCAATCTCTACCCGTCGCTCACCGTTGCCGCCGCTCCCGTATTCTCGCGTAAACCCTCTCCTACATCCGATCGGGGGTGGACACATGTTGGTGATTAGGCGCAGGCCGCGTGTAGGAGCGGGTAAACCcgctc                                                                                <  1:20892/150‑3 (MQ=25)
                                                                     gccgggccTGCTGGCCAATCTCTACCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCGGGGGTGGACACATGTTGGTGATTAGGCGCAGGCCGCGTGTAGGAGCGGGGTTACCCGCGagag                                                                             >  2:254706/1‑150 (MQ=255)
                                                                                  gCCAATCTCTACCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCAGATCGGGGGAGGACACATGTTGGTGATTAGGCGCAGGCCGCGTGAAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCctgat                                                                >  1:1130188/1‑148 (MQ=255)
                                                                                  cccAATATCTACCCGTGGCTCTCCGTTGCCGCTGCTACCGTATTAGCGGGTAAACCCGCTCCTACATCCGATCGGGGGTGGACACATGTTGGTCATGAGGCGCAGGCCGCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCctgct                                                                <  1:254706/149‑1 (MQ=21)
                                                                                      aTCTCTACCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCGGGGGTGGACACATGTTGGTGATTAGGCGCAGGCCGCGTGTAGGAGCgg                                                                                            >  2:939387/1‑118 (MQ=255)
                                                                                      aTCTCTACCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCGGGGGTGGACACATGTTGGTGATTAGGCGCAGGCCGCGTGTAGGAGCgg                                                                                            <  1:939387/118‑1 (MQ=255)
                                                                                          ctACCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCCCTCCTACATCCCATCGGGAGTGGACACATGTTGGTGATTAGGCGCAGGCCCCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGACCTCCTGGCCaaac                                                        >  2:557981/1‑148 (MQ=21)
                                                                                           tACCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTTCTACATCCGATCGGGGGTGGACACATGTTGGTGATTAGGCGCAGACCGCGTGTAGGAGCGGGTTTACCCGCGAAAGCGCCGGCCCTGCTGGCCAACtt                                                       >  1:394838/1‑150 (MQ=255)
                                                                                           tACCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCGGGGGTGGACACATGTTGGTGATTAGGCAACGGCCGCGGGGAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTTGCCAACtt                                                       >  2:886216/1‑150 (MQ=25)
                                                                                            aCCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCGGGGGTGGa                                                                                                                                    <  1:417005/72‑1 (MQ=255)
                                                                                            aCCCGGCGCGCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCGGGGGTGGa                                                                                                                                    >  2:417005/1‑72 (MQ=255)
                                                                                             cccGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCGGGGGTGGACACATGTTGGTGATTAGGCGCAGGCCGCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAACTTcc                                                     >  2:696551/1‑150 (MQ=255)
                                                                                                   gCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCGGGGGTGGACACATGTTGGTGATTAGGCGCAGGCCGCGTGTAGGAGCGGGTTTAc                                                                                      >  1:911815/1‑111 (MQ=255)
                                                                                                   gCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCGGGGGTGGACACATGTTGGTGATTAGGCGCAGGCCGCGTGTAGGAGCGGGTTTAc                                                                                      <  2:911815/111‑1 (MQ=255)
                                                                                                   gCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCGGGGGTGGACACATGTTGGTGATTAGGCGCAGGCCGCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAACTTCCACccgc                                               >  2:579483/1‑150 (MQ=255)
                                                                                                      cACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCGGGGGTGGACACATGTTGGTGATTAGGCGCAGGCCGCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAACTTCCACCCGCCGt                                            <  1:696551/150‑1 (MQ=255)
                                                                                                       aCCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCGGGGGTGGACACATGTTGGTGATTAGGCGCAGGCCGCGTGTAGGAGCGGGTTTACCCGCGAATGGGGCGGCCCTTCTGGCCAACTTCAACCAGCCGtt                                           >  2:498510/1‑150 (MQ=25)
                                                                                                        ccGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCGGGGGTGGACACATGTTGGTGATTAGGCGCAGGCCGCGTGTAGGAGCGGGTTTACCCGCGAAAg                                                                             <  1:642741/115‑1 (MQ=255)
                                                                                                        ccGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCGGGGGTGGACACATGTTGGTGATTAGGCGCAGGCCGCGTGTAGGAGCGGGTTTACCCGCGAAAg                                                                             >  2:642741/1‑115 (MQ=255)
                                                                                                        ccGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCGGGGGTGGACACATGTTGGTGATTAGGCGCAGGCCGCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAACTTCCAc                                                   >  2:545327/1‑141 (MQ=255)
                                                                                                        ccGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCGGGGGTGGACACATGTTGGTGATTAGGCGCAGGCCGCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAACTTCCAc                                                   <  1:545327/141‑1 (MQ=255)
                                                                                                         cGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCGGGGGTGGACACATGTTGGTGATTAGGCGCAGGCCGCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAACTTCCACCCGCCGTTCa                                         >  1:760099/1‑150 (MQ=255)
                                                                                                              ccgccgCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCGGGGGTGGACACATGTTGGTGATTAGGCGCAGGCCGCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAACTTCCACCCGCCGTTCACCGtt                                    <  1:622926/150‑1 (MQ=255)
                                                                                                                      aCCGTATTCGCGGGTAACCACGCTCCTACATCCGTTCGGGGGTGGACATATCTTGGTGATTAGGCGCAGGCCGCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAACTTCCACCCGCCGTTCACCGTTGCCGCCac                            <  1:27560/150‑1 (MQ=21)
                                                                                                                                cgggtaaaccccctcctacATCCGATCGGGGGTGGACACATGTTGGTGCTTAGGCGCAGCCCGCGCGTAGGAGCGCGTTTACCCGCGAAAGGCCCGGCCCTGCTGGCCCACTTCCACCCGCCGTTCACCGTTGCCGCCACTCCTCAAAcc                  <  2:378297‑M2/131‑1 (MQ=255)
                                                                                                                                    taaacccgctcctacATCCGATCGGGGGTGGACACATGTTGGTGATTAGGCGCAGGCCGCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAACTTCCACCCGCCGTTCACCTTTGCCGCCACTACTCAAACCCttt              <  1:886216‑M2/135‑1 (MQ=255)
                                                                                                                                    taaacccgctcctacATCCGATCGGGGGTGGACACATGTTGGTGATTAGGCGCAGGCCGCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAACTTCCACCCGCCGTTCACCGTTGCCGCCACTACTCAAACCCttt              <  1:498510‑M2/135‑1 (MQ=255)
                                                                                                                                         ccgctcctacATCCGATCGGGGGTGGACACATGTTGGTGATTAGGCGCAGGCCGCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAACTTCCACCCGCCGTTCACCGTTGCCGCCACTACTCAAACCCTTTCaaaa         <  2:797208‑M2/140‑1 (MQ=255)
                                                                                                                                          cgctcctacATCCGATCGGGGGTGGACACATGTTGGTGATTAGGCGCAGGCCGCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAACTTCCACCCGCCGTTCACCGTTGCCGCCACTACTCAAACCCTTTCaaaaa        <  2:760099‑M2/141‑1 (MQ=255)
                                                                                                                                             ggcTACATCCGAGAGGTGGGCGAGACTTGATGCTGTTTACTCGCAGGACGCGTTTCCGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAACTTCCACCCGCCGTTCACCGTTGCCGCCACTACTCAAACCCTTTCAAAAAGcc     <  2:217097/148‑1 (MQ=18)
                                                                                                                                                tacATCCGATCGGGGGTGGACACATGTTGGTGATTAGGCGCAGGCCGCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAACTTCCACCCGCCGTTCACCGTTGCCGCCACTACTCAAACCCTTTCAAAAAGCCCCa  <  1:1050572‑M2/147‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
TTTGCGGCCCTAACGCAACACAAGGCCGCCCCTGCAACAGCCCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGGCCTGCTGGCCAATCTCTACCCGTCGCTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACATCCGATCGGGGGTGGACACATGTTGGTGATTAGGCGCAGGCCGCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAACTTCCACCCGCCGTTCACCGTTGCCGCCACTACTCAAACCCTTTCAAAAAGCCCCA  >  NC_002947/4593758‑4594051

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.