New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5488624 =	59 (1.310)	4 (0.090)	4/240	NT	6.9%	coding (1905/2772 nt)	PP_4824	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	5488652 =	51 (1.170)					coding (1933/2772 nt)	PP_4824	two‑component system sensor histidine kinase/response regulator

AGCTGATCGGTCTGATGCAGGGCGAGTTCGGCATCAAGAGCAGCACCGGCATGGGCAACACCTTGTGGCTGACCTTGCCGCTGGACCCTTCGCGCCTGGAACAGCCACCAGCGGACCTCGACAGCCCGCTGCGCGATGCCCGCGTGCTGGTGGTCGACGACAACGACACGTGCCGCAAGGTGCTTGTACAGCAGTGCAGTGCCTGGGGCATGAACGTCAGCGCGGTGCCGTCAGGCAAGGAGGCTCTGGCCCTTTTGCGCACCAAGGCGCACCTGCGCGACTACTTC  >  NC_002947/5488503‑5488789                                                                                                                                                      |                                                                                                                                          cggtggtCGGTGTGATGGAGGGCGAGTTCGGCATCAAGAGCGGCCCCGGGATGGGCAACACCTGGTGGCTGTTCTTGCAGCTGGACCCGTCGCGCCTGGCACAGCCACCAGCGGACCTCGACAGCCCGCTGCGCGATGCCCGCGTGCtgg                                                                                                                                           <  2:100545/144‑1 (MQ=255)  gCTGATCGGTCTGATGCAGGGCGAGTTCGGCATCAAGAGCAGCACCGGCATGGGCAACACCTTGTGGCTGACCTTGCCGCTGGACCCTTCGCGCCTGGAACAGCCACCAGCGGACCTCGACAGCCCGCTGCGCGATGCCCGCGTGCtggt                                                                                                                                          >  2:21896/1‑150 (MQ=255)   cTGATCGGTCTGATGCAGGGCGAGTTCGGCATCAAGAGCAGCACCGGCATGGGCAACACCTTGTGGCTGACCTTGCCGCTGGACCCTTCGCGCCTGGAACAGCCACCAGCGGACCTCGACAGCCCGCTGCGCGATGCCCGCGTGCtggtg                                                                                                                                         <  1:161816/150‑1 (MQ=255)       tCGGTCTGATGCAGGGCGAGTTCGGCATCAAGAGCAGCACCGGCATGGGCAACACCTTGTGGCTGACCTTGCCGCTGGACCCTTCGCGCCTGGAACAGCCACCAGCGGACCTCGACAGCCCGCTGCGCGATGCCCGCGTGCTGGTGGTcg                                                                                                                                     >  2:1178886/1‑150 (MQ=255)         ggTCTGATGCAGGGCGAGTTCGGCATCAAGAGCAGCTCCGGCATGGGCAACACCTTGTGGCTGACCTTGCCGCTGGACCCTTCTCGCCTGGAACAGCCACCAGCGGACCTCGACAGCCCGTTGCGCGATGCCCGCGTGCTGGTGGTcgac                                                                                                                                   <  1:136876/150‑1 (MQ=255)           tCTGATGCAGGGCGAGTTCGGCATCAAGAGCAGCACCGGCATGGGCAACACCTTGTGGCTGACCTTGCCGCTGGACCCTTCGCGCCTGGAACAGCCACCAGCGGACCTCGACAGCCCGCTGCGCGATGCCCGCGTGCTGGTGGTcgacga                                                                                                                                 >  1:713611/1‑150 (MQ=255)               aTGCAGGGCGAGTTCGGCATCAAGAGCAGCACCGGCATGGGCAACACCTTGTGGCTGACCTTGCCGCTGGACCCTTCGCGCCTGGAACAGCCACCAGCGGACCTCGACAGCCCGCTGCGCGATGCCCGCGTGCTGGTGGTCGacgacaac                                                                                                                             >  1:933871/1‑150 (MQ=255)                 gCAGGGCGAGTTCGGCATCAAGAGCAGCACCGGCATGGGCAACACCTTGTGGCTGACCTTGCCGCTGGACCCTTCGCGCCTGGAACAGCCACCAGCGGACCTCGACAGCCCGCTGCGCGATGCCCGCGTGCTGGTGGTCGacgacaacga                                                                                                                           >  1:908899/1‑150 (MQ=255)                    ggccagagcctccttgcctgacggcaccgcgctgacgttcatgccccaggcactgcactgctgtacaagcaccttgcggcacgtgtcgttgtcgtcgaccacCAGCCCGCTGCGCGATGCCCGCGTGCTGGTGGTcga                                                                                                                                    >  1:79586‑M1/103‑138 (MQ=255)                    ggccagagcctccttgcctgacggcaccgcgctgacgttcatgccccaggcactgcactgctgtacaagcaccttgcggcacgtgtcgttgtcgtcgaccacCAGCCCGCTGCGCGATGCCCGCGTGCTGGTGGTcga                                                                                                                                    <  2:79586‑M1/36‑1 (MQ=255)                     ggCGAGTTCGGCATCAAGAGCAGCACCGGCATGGGCAACACCTTGTGGCTGACCTTGCCGCTGGACCCTTCGCGCCTGGAACAGCCACCAGCGGACCTCGACAGCCCGCTGCGCGATGCCCGCGTGCTGGTGGTCGACGACAACGACACg                                                                                                                       >  2:281785/1‑150 (MQ=255)                     ggCGAGTTCGGCATCAAGAGCAGCACCGGCATGGGCAACACCTTGTGGCTGACCTTGCCGCTGGACCCTTCGCGCCTGGAACAGCCACCAGCGGACCTCGACAGCCCGCTGCGCGATGCCCGCGTGCTGGTGGTCGACGACAACGACACg                                                                                                                       >  2:396281/1‑150 (MQ=255)                        gAGTTCGGCATCAAGAGCAGCACCGGCATGGGCAACACCTTGTGGCTGACCTTGCCGCTGGACCCTTCGCGCCTGGAACAGCCACCAGCGGACCTCGACAGCCCGCTGCGCGATGCCCGCGTGCTGGTGGTCGACGACAACGACACGTGc                                                                                                                    <  1:1199683/150‑1 (MQ=255)                        gAGTTCGGCATCAAGAGCAGCACCGGCATGGGCAACACCTTGTGGCTGACCTTGCCGCTGGACCCTTCGCGCCTGGAACAGCCACCAGCGGACCTCGACAGCCCGCTGCGCGATGCCCGCGTGCTGGTGGTCGACGACAACGACACGTGc                                                                                                                    >  1:648403/1‑150 (MQ=255)                              ggCATCAAGAGCAGCACCGGCATGGGCAACACCTTGTGGCTGACCTTGCCGCTGGACCCTTCGCGCCTGGAACAGCCACCAGCGGACCTCGACAGCCCGCTGCGCGATGCCCGCGTGCTGGTGGTCGACGACAACGACACGTGCCGCAAg                                                                                                              <  2:898110/150‑1 (MQ=255)                              ggCATCAAGAGCAGCACCGGCATGGGCAACACCTTGTGGCTGACCTTGCCGCTGGACCCTTCGCGCCTGGAACAGCCACCAGCGGACCTCGACAGCCCGCTGCGCGATGCCCGCGTGCTGGTGGTCGACGACAACGACACGTGCCGCAAg                                                                                                              <  1:1178886/150‑1 (MQ=255)                                 aTCAAGAGCAGCACCGGCATGGGCAACACCTTGTGGCTGACCTTGCCGCTGGACCCTTCGCGCCTGGAACAGCCACCAGCGGACCTCGACAGCCCGCTGCGCGATGCCCGCGTGCTGGTGGTCGACGACAACGACACGTGCCGCAAGGTg                                                                                                           >  1:224555/1‑150 (MQ=255)                                    aaGAGCAGCACCGGCATGGGCAACACCTTGTGGCTGACCTTGCCGCTGGACCCTTCGCGCCTGGAACAGCCACCAGCGGACCTCGACAGCCCGCTGCGCGATGCCCGCGTGCTGGTGGTCGACGACAACGACACGTGCCGCAAGGTGCtt                                                                                                        <  1:53374/150‑1 (MQ=255)                                    aaGAGCAGCACCGGCATGGGCAACACCTGGTGGCTGACCTTGCCGCTGGACCCTTCGCGCCTGGAACAGCCACCAGCGGACCTCGACAGGCCGCTGCGCGATGCCCGCGTGCTGGTGGTCGACGACAACGACACGTGCCGCAAGGTGCtt                                                                                                        <  2:266656/150‑1 (MQ=255)                                     agagCAGCACCGGCATGGGCAACACCTTGTGGCTGACCTTGCCGCTGCCTGGGTCGCGCCTGGAACAGCCACCAGCGGACCTCGACAGCCCGCTGCGCGATGCCCGCGTGCTGGTGGTCGACGACAACGACACGTGCCGCAAGGTGCTTg                                                                                                       <  1:73704/150‑1 (MQ=255)                                                 gCATGGGCAACACCTTGTGGCTGACCTTGCCGCTGGACCCTTCGCGCCTGGAACAGCCACCAGCGGACCTCGACAGCCCGCTGCGCGATGCCCGCGTGCTGGTGGTCGACGACAACGACACGTGCCGCAAGGTGCTTGTACAgcagtgca                                                                                           >  2:889554/1‑150 (MQ=255)                                                   aTGGGCAACACCTTGTGGCTGACCTTGCCGCTGGACCCTTCGCGCCTGGAACAGCCACCAGCGGACCTCGACAGCCCGCTGCGCGATGCCCGCGTGCTGGTGGTCGACGACAACGACACGTGCCGCAAGGTGCTTGTACAgcagtgcagt                                                                                         <  2:933871/150‑1 (MQ=255)                                                     gggCAACACCTTGTGGCTGACCTTGCCGCTGGACCCTTCGCGCCTGGAACAGCCACCAGCGGACCTCGACAGCCCGCTGCGCGATGCCCGCGTGCTGGTGGTCGACGACAACGACACGTGCCGCAAGGTGCTTGTACAGCagtgcagtgc                                                                                       <  2:969127/150‑1 (MQ=255)                                                        gttcatgccccaggcactgcactgctgtacaagcaccttgcggcacgtgtcgttgtcgtcgaccacCAGCCCGCTGCGCGATGCCCGCGTGCTGGTGGTcgac                                                                                                                                   <  1:238372‑M1/37‑1 (MQ=255)                                                        gttcatgccccaggcactgcactgctgtacaagcaccttgcggcacgtgtcgttgtcgtcgaccacCAGCCCGCTGCGCGATGCCCGCGTGCTGGTGGTcgac                                                                                                                                   >  2:238372‑M1/67‑103 (MQ=255)                                                          acacCTTGTGGCTGACCTTGCCGCTGGACCCTTCGCGCCTGGAACAGCCACCAGCGGACCTCGACAGCCCGCTGCGCGATGCCCGCGTGCTGGTGGTCGACGACAACGACACGTGCCGCAAGGTGCTTGTACAGCAGTGCAGTGCCTggg                                                                                  <  2:648403/150‑1 (MQ=255)                                                          acacCTTGTGGCTGACCTTGCCGCTGGACCCTTCGCGCCTGGAACAGCCACCAGCGGACCTCGACAGCCCGCTGCGCGATGCCCGCGTGCTGGTGGTCGACGACAACGACACGTGCCGCAAGGTGCTTGTACAGCAGTGCAGTGCCTggg                                                                                  <  2:224555/150‑1 (MQ=255)                                                          acacCTTGTGGCTGACCTGGCCGCTGGACCCTTCGCGCCTGGAACAGCCACCAGCGGACCTCGACAGCCCGCTGCGCGATGCCCGCGTGCTGGTGGTCGACGACAACGACACGTGCCGCAAGGTGCTTGTACAGCAGTGCAGTGCCTggg                                                                                  <  2:911199/150‑1 (MQ=255)                                                                  tgGCTGACCTTGCCGCTGGACCCTTCGCGCCTGGAACAGCCACCAGCGGACCTCGACAGCCCGCTGCGCGATGCCCGCGTGCTGGTGGTCGACGACAACGACACGTGCCGCAAGGTGCTTGTACAGCAGTGCAGTGCCTGGGGCATGAAc                                                                          <  2:490546/150‑1 (MQ=255)                                                                  tgGCTGACCTTGCCGCTGGACCCTTCGCGCCTGGAACAGCCACCAGCGGACCTCGACAGCCCGCTGCGCGATGCCCGCGTGCTGGTGGTCGACGACAACGACACGTGCCGCAAGGTGCTTGTACAGCAGTGCAGTGCCTGGGGCATGAAc                                                                          <  2:775875/150‑1 (MQ=255)                                                                    gCTGACCTTGCCGCTGGACCCTTCGCGCCTGGAACAGCCACCAGCGGACCTCGACAGCCCGCTGCGCGATGCCCGCGTGCTGGTGGTCGACGACAACGACACGTGCCGCAAGGTGCTTGTACAGCAGTGCAGTGCCTGGGGCATGAACGt                                                                        >  2:478345/1‑150 (MQ=255)                                                                     cTGACCTTGCCGCTGGACCCTTCGCGCCTGGAACAGCCACCAGCGGACCTCGACAGCCCGCTGCGCGATGCCCGCGTGCtggt                                                                                                                                          >  1:28188/1‑83 (MQ=255)                                                                     cTGACCTTGCCGCTGGACCCTTCGCGCCTGGAACAGCCACCAGCGGACCTCGACAGCCCGCTGCGCGATGCCCGCGTGCtggt                                                                                                                                          <  2:28188/83‑1 (MQ=255)                                                                             gCCGCTGGACCCTTCGCGCCTGGAACAGCCACCAGCGGACCTCGACAGCCCGCTGCGCGATGCCCGCGTGCTGGTGGTCGACGACAACGACACGTGCCGCAAGGTGCTTGTACAGCAGTGCAGTGCCTGGGGCATGAACGTCAGCGCGGt                                                               <  1:431055/150‑1 (MQ=255)                                                                                 cTGGACCCTTCGCGCCTGGAACAGCCACCAGCGGACCTCGACAGCCCGCTGCGCGATGCCCGCGTGCTGGTGGTCGACGACAACGACACGTGCCGCAAGGTGCTTGTACAGCAGTGCAGTGCCTGGGGCATGAACGTCAGCGCGGTGCCg                                                           >  2:113503/1‑150 (MQ=255)                                                                                       ccTTCGCGCCTGGAACAGCCACCAGCGGACCTCGACAGCCCGCTGCGCGATGCCCGCGTGCTGGTGGTCGACGACAACGACACGTGCCGCAAGGTGCTTGTACAGCAGTGCAGTGCCTGGGGCATGAACGTCAGCGCGGTGCCGTCAGGc                                                     <  1:478345/150‑1 (MQ=255)                                                                                         ttCGCGCCTGGAACAGCCACCAGCGGACCTCGACAGCCCGCTGCGCGATGCCCGCGTGCTGGTGGTCGACGACAACGACACGTGCCGCAAGGTGCTTGTACAgcagtg                                                                                             >  2:823392/1‑108 (MQ=255)                                                                                         ttCGCGCCTGGAACAGCCACCAGCGGACCTCGACAGCCCGCTGCGCGATGCCCGCGTGCTGGTGGTCGACGACAACGACACGTGCCGCAAGGTGCTTGTACAgcagtg                                                                                             <  1:823392/108‑1 (MQ=255)                                                                                            gcgcCTGGAACAGCCACCAGCGGACCTCGACAGCCCGCTGCGCGATGCCCGCGTGCTGGTGGTCGACGACAACGACACGTGCCGCAAgg                                                                                                             <  2:611555/89‑1 (MQ=255)                                                                                            gcgcCTGGAACAGCCACCAGCGGACCTCGACAGCCCGCTGCGCGATGCCCGCGTGCTGGTGGTCGACGACAACGACACGTGCCGCAAgg                                                                                                             >  1:611555/1‑89 (MQ=255)                                                                                            gcgcCTGGAACAGCCACCAGCGGACCTCGACAGCCCGCTGCGCGATGCCCGCGTGCTGGTGGTCGACGACAACGACACGTGCCGCAAGGTGCTTGTACAGCAGTGCAGTGCCTGGGGCATGAACGTCAGCGCGGTGCCGTCAGGCAagga                                                >  2:480724/1‑150 (MQ=255)                                                                                                cTGGAACAGCCAACAGCGGACCTCGACAGCCCGCTGCGCGATGCCCGCGTGCTGGTGGTCGACGACAACGACACGTGCCGCAAGGTGCTTGTACAGCAGTGCAGTGCCTGGGGCATGAACGTCAGCGCGGTGCCGTCAGGCAAGGAGGct                                            >  2:567778/1‑150 (MQ=255)                                                                                                   gAACAGCCACCAGCGGACCTCGACAGCCCGCTGCGCGATGCCCGCGTGCTGGTGGTCGACGACAGCCACACGTGCCGCAAGGTGCTTGTACAGCAGTGCAGTGCCTGGGGCATGAACGTCAGCGCGGTGCCGTCAGGCAAGGAGGCTCTg                                         >  2:891609/1‑150 (MQ=255)                                                                                                   gAACAGCCACCAGCGGACCTCGACAGCCCGCTGCGCGATGCCCGCGTGCTGGTGGTCGACGACAACGACACGTGCCGCAAGGTGCTTGTACAGCAGTGCAGTGCCTGGGGCATGAACGTCAGCGCGGTGCCGTCAGGCAAGGAGGCTCTg                                         <  1:113503/150‑1 (MQ=255)                                                                                                   gAACAGCCACCAGCGGACCTCGACAGCCCGCTGCGCGATGCCCGCGTGCTGGTGGTCGACGACAACGACACGTGCCGCAAGGTGCTTGTACAGCAGTGCAGTGCCTGGGGCATGAACGTCAGCGCGGTGCCGTCAGGCAAGGAGGCTCTg                                         >  1:1174697/1‑150 (MQ=255)                                                                                                     aCAGCCACCAGCGGACCTCGACAGCCCGCTGCGCGATGCCCGCGTGCTGGTGGTCGACGACAACGACACGTGCCGCAAGGTGCTTGTACAGCAGTGCAGTGCCTGGGGCATGAACGTCAGCGCGGTGCCGTCAGGCAAGGAGGCTCTGGc                                       <  2:1174697/150‑1 (MQ=255)                                                                                                           accaGCGGACCTCGACAGCCCGCTGCGCGATGCCCGCGTGCTGGTGGTCGACGACAACGACACGTGCCGCAAGGTGCTTGTACAGCAGTGCAGTGCCTGGGGCATGAACGTCAGCGCGGTGCCGTCAGGCAAGGAGGCTCTGGCCCtttt                                 >  2:330244/1‑150 (MQ=255)                                                                                                             caGCGGACCTCGACAGCCCGCTGCGCGATGCCCGCGTGCTGGTGGTCGACGACAACGACACGTGCCGCAAGGTGCTTGTACAGCAGTGCAGTGCCTGGGGCATGAACGTCAGCGCGGTGCCGTCAGGCAAGGAGGCTCTGGCCCttt                                  <  1:718111/147‑1 (MQ=255)                                                                                                             caGCGGACCTCGACAGCCCGCTGCGCGATGCCCGCGTGCTGGTGGTCGACGACAACGACACGTGCCGCAAGGTGCTTGTACAGCAGTGCAGTGCCTGGGGCATGAACGTCAGCGCGGTGCCGTCAGGCAAGGAGGCTCTGGCCCttt                                  >  2:718111/1‑147 (MQ=255)                                                                                                               gCGGACCTCGACAGCCCGCTGCGCGATGCCCGCGTGCTGGTGGTCGACGACAACGACACGTGCCGCAAGGTGCTTGTACAGCAGTGCAGTGCCTGGGGCATGAACGTCAGCGCGGTGCCGTCAGGCAAGGAGGCTCTGGCCCTTTTgcgc                             >  2:588273/1‑150 (MQ=255)                                                                                                                 gtcgaccaccagcacgcgggcatcgcgcagcgggctgGTGGTCGACGACAACGACACGTGCCGCAAGGTGCTTGTACAGCAGTGCAGTGCCTGGGGCATGAAc                                                                          <  1:238372‑M2/66‑1 (MQ=255)                                                                                                                 gtcgaccaccagcacgcgggcatcgcgcagcgggctgGTGGTCGACGACAACGACACGTGCCGCAAGGTGCTTGTACAGCAGTGCAGTGCCTGGGGCATGAAc                                                                          >  2:238372‑M2/38‑103 (MQ=255)                                                                                                                 ggACCTCGACAGCCCGCTGCGCGATGCCCGCGTGCTGGTGGTCGACGACAACGACACGTGCCGCAAGGTGCTTGTACAGCAGTGCAGTGCCTGGGGCATGAACGTCAGCGCGGTGCCGTCAGGCAAGGAGGCTCTGGCCCTTTTGCGCAc                           <  1:567778/150‑1 (MQ=255)                                                                                                                  tcgaccaccagcacgcgggcatcgcgcagcgggctgGTGGTCGACGACAACGACACGTGCCGCAAGGTGCTTGTACAGCAGTGCAGTGCCTGGGGCATGAACGTCAGCGCGGTGCCGTCAGGCAAGGAGGCTCTGGcc                                      >  1:79586‑M2/37‑138 (MQ=255)                                                                                                                  tcgaccaccagcacgcgggcatcgcgcagcgggctgGTGGTCGACGACAACGACACGTGCCGCAAGGTGCTTGTACAGCAGTGCAGTGCCTGGGGCATGAACGTCAGCGCGGTGCCGTCAGGCAAGGAGGCTCTGGcc                                      <  2:79586‑M2/102‑1 (MQ=255)                                                                                                                     cTCGACAGCCCGCTGCGCGATGCCCGCGTGCTGGTGGTCGACGACAACGACACGTGCCGCAAGGTGCTTGTACAGCAGTGCAGTGCCTGGGGCATGAACGTCAGCGCGGTGCCGTCAGGCAAGGAGGCTCTGGCCCTTTTGCGCACCAAg                       >  1:1092702/1‑150 (MQ=255)                                                                                                                     cTCGACAGCCCGCTGCGCGATGCCCGCGTGCTGGTGGTCGACGACAACGACACGTGCCGCAAGGTGCTTGTACAGCAGTGCAGTGCCTGGGGCATGAACGTCAGCGCGGTGCCGTCAGGCAAGGAGGCTCTGGCCCTTTTGCGCACCAAg                       <  1:281785/150‑1 (MQ=255)                                                                                                                       cGACAGCCCGCTGCGCGATGCCCGCGTGCTGGTGGTCGACGACAACGACACGTGCCGCAAGGTGCTTGTACAGCAGTGCAGTGCCTGGGGCATGAACGTCAGCGCGGTGCCGTCAGGCAAGGAGGCTCTGGCCCTTTTGCGCACCAAGgc                     <  1:889554/150‑1 (MQ=255)                                                                                                                          CAGCCCGCTGCGCGATGCCCGCGTGCTGGTGGTCGACGACAACGACACGTGCCGCAAGGTGCtt                                                                                                        <  1:336443‑M1/64‑1 (MQ=255)                                                                                                                          CAGCCCGCTGCGCGATGCCCGCGTGCTGGTGGTCGACGACAACGACACGTGCCGCAAGGTGCtt                                                                                                        >  2:336443‑M1/1‑64 (MQ=255)                                                                                                                             CCCGCTGCGCGATGCCCGCGTGCTGGTGGTCGACGACAACGACACGTGCCGCAAGGTGCTTGTACAgcagt                                                                                              >  2:579008‑M1/1‑71 (MQ=255)                                                                                                                             CCCGCTGCGCGATGCCCGCGTGCTGGTGGTCGACGACAACGACACGTGCCGCAAGGTGCTTGTACAgcagt                                                                                              <  1:579008‑M1/71‑1 (MQ=255)                                                                                                                             CCCGCTGCGCGATGCCCGCGTGCTGGTGGTCGACGACAACGACACGTGCCGCAAGGTGCTTGTACAGCAGTGCAGTGCCTGGGGCATGAACGTCAGCGCGGTGCCGTCAGGCAAGGAGGCTCTGGCCCTTTTGCGCACCAAGGCGCACCt               <  1:804612‑M1/150‑1 (MQ=255)                                                                                                                                gCTGCGCGATGCCCGCGTGCTGGTGGTCGACGACAACGACACGTGCCGCAAGGTGCTTGTACAGCAGTGCAGTGCCTGGGGCATGAACGTCAGCGCGGTGCCGTCAGGCAAGGAGGCTCTGGCCCTTTTGCGCACCAAGGCGCACCTgcg            <  2:1206120/150‑1 (MQ=255)                                                                                                                                         tGCCCGCGTGCTGGTGGTCGACGACAACGACACGTGCCGCAAGGTGCTTGTACAGCAGTGCAGTGCCTGGGGCATGAACGTCAGCGCGGTGCCGTCAGGCAAGGAGGCTCTGGCCCTTTTGCGCACCAAGGCGCACCTGCGCGACTACtt   <  1:330244/150‑1 (MQ=255)                                                                                                                                          gCCCGCGTGCTGGTGGTCGACGACAACGACACGTGCCGCAAGGTGCTTGTACAGCAGTGCAGTGCCTGGGGCATGAACGTCAGCGCGGTGCCGTCAGGCAAGGAGGCTCTGGCCCTTTTGCGCACCAAGGCGCACCTGCGCGACTACTTc  <  2:804612/150‑1 (MQ=255)                                                                                                                                          gCCCGCGTGCTGGTGGTCGACGACAACGACACGTGCCGCAAGGTGCTTGTACAGCAGTGCAGTGCCTGGGGCATGAACGTCAGCGCGGTGCCGCCAGGCAAGGAGGCTCTGGCCCTTTTGCGCACCAAGGCGCACCTGCGCGACTACTTc  <  1:647586/150‑1 (MQ=255)                                                                                                                                            ccGCGTGCTGGTGGTCGACGACAACGACACGTGCCGCAAGGTGCTTGTACAGCAGTGCAGTGCCTGGGGCATGAATGTCAGCGCGGTGCCGTCAGGCAaggagg                                              >  1:269869/1‑104 (MQ=255)                                                                                                                                            ccGCGTGCTGGTGGTCGACGACAACGACACGTGCCGCAAGGTGCTTGTACAGCAGTGCAGTGCCTGGGGCATGAACGTCAGCGCGGTGCCGTCAGGCAaggagg                                              <  2:269869/104‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                          AGCTGATCGGTCTGATGCAGGGCGAGTTCGGCATCAAGAGCAGCACCGGCATGGGCAACACCTTGTGGCTGACCTTGCCGCTGGACCCTTCGCGCCTGGAACAGCCACCAGCGGACCTCGACAGCCCGCTGCGCGATGCCCGCGTGCTGGTGGTCGACGACAACGACACGTGCCGCAAGGTGCTTGTACAGCAGTGCAGTGCCTGGGGCATGAACGTCAGCGCGGTGCCGTCAGGCAAGGAGGCTCTGGCCCTTTTGCGCACCAAGGCGCACCTGCGCGACTACTTC  >  NC_002947/5488503‑5488789

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.