New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5965514 =	48 (1.060)	3 (0.070)	3/234	NT	6.2%	coding (652/696 nt)	had	(S)‑2‑haloacid dehalogenase
	?	NC_002947	5965558 =	45 (1.060)					coding (696/696 nt)	had	(S)‑2‑haloacid dehalogenase

CCTGGCGATGACATTGCCGGTGCCCAGCGCGCCGGTTTGCGCGCGGTGTGGTTCAACCCGCAGGGCAAGGCCTGGACTGGCGATCAGGCGCCGGATGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGG  >  NC_002947/5965409‑5965702                                                                                                                                                      |                                                                                                                                                 tgtgagtggctgatcgcaaaaaagcccgccgtcgctgcgggcttttttatgcctgtgggttttgtgttgcccgtgcccgcgaatgggccgcaaagcggctcccgtCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGa                                                                                                                                                  >  1:843216‑M1/106‑150 (MQ=255) ccTGGCGATGACATTGCCGGTGCCCAGCGCGCCGGTTTGCGCGCGGTGTGGTTCAACCCGCAGGGCAAGGCCTGGACTGGCGATCAGGCGCCGGATGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGa                                                                                                                                                  >  2:139546/1‑150 (MQ=255)       gATGACATTGCCGGTGCCCAGCGCGCCGGTTTGCGCGCGGTGTGGTTCAACCCGCAGGGCAAGGCCTGGACTGGCGATCAGGCGCCGGATGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAg                                                                                                                                            >  1:322812/1‑150 (MQ=255)            gatcgcaaaaaagcccgccgtcgctgcgggcttttttatgcctgtgggttttgtgttgcccgtgcccgcgaatgggccgcaaagcggctcccgtCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACg                                                                                                                                                >  2:621625‑M1/95‑141 (MQ=255)            gatcgcaaaaaagcccgccgtcgctgcgggcttttttatgcctgtgggttttgtgttgcccgtgcccgcgaatgggccgcaaagcggctcccgtCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACg                                                                                                                                                <  1:621625‑M1/47‑1 (MQ=255)                 ccGGTGCCCAGCGCGCCGGTTTGCGCGCGGTGTGGTTCAACCCGCAGGGCAAGGCCTGGACTGGCGATCAGGCGCCGGATGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCg                                                                                                                                  <  1:1191966/150‑1 (MQ=255)                  cGGTGCCCAGCGCGCCGGTTTGCGCGCGGTGTGGTTCAACCCGCAGGGCAAGGCCTGGACTGGCGATCAGGCGCCGGATGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCgg                                                                                                                                 >  2:329585/1‑150 (MQ=255)                  cGGTGCCCAGCGCGCCGGTTTGCGCGCGGTGTGGTTCAACCCGCAGGGCAAGGCCTGGACTGGCGATCAGGCGCCGGATGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCgg                                                                                                                                 <  1:519766/150‑1 (MQ=255)                     tGCCCAGCGCGCCGGTTTGCGCGCGGTGTGGTTCAACCCGCAGGGCAAGGCCTGGACTGGCGATCAGGCGCCGGATGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCgg                                                                                                                                 >  1:753134/1‑147 (MQ=255)                     tGCCCAGCGCGCCGGTTTGCGCGCGGTGTGGTTCAACCCGCAGGGCAAGGCCTGGACTGGCGATCAGGCGCCGGATGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCgg                                                                                                                                 <  2:753134/147‑1 (MQ=255)                         cAGCGCGCCGGTTTGCGCGCGGTGTGGTTCAACCCGCAGGGCAAGGCCTGGACTGGCGATCAGGCGCCGGATGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCttt                                                                                                                                     >  2:95356/1‑139 (MQ=255)                         cAGCGCGCCGGTTTGCGCGCGGTGTGGTTCAACCCGCAGGGCAAGGCCTGGACTGGCGATCAGGCGCCGGATGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCttt                                                                                                                                     <  1:95356/139‑1 (MQ=255)                         cAGCGCGCCGGTTTGCGCGCGGTGTGGTTCAACCCGCAGGGCAAGGCCTGGACTGGCGATCAGGCGCCGGATGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTc                                                                                                                          <  2:465123/150‑1 (MQ=255)                         cAGCGCGCCGGTTTGCGCGCGGTGTGGTTCAACCCGCAGGGCAAGGCCTGGACTGGCGATCAGGCGCCGGATGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTc                                                                                                                          <  2:465144/150‑1 (MQ=255)                              cgcCGGTTTGCGCGCGGTGTGGTTCAACCCGCAGGGCAAGGCCTGGACTGGCGATCAGGCGCCGGATGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGcggg                                                                                                                     <  1:623569/150‑1 (MQ=255)                               gcCGGTTTGCGCGCGGTGTGGTTCAACCCGCAGGGCAAGGCCTGGACTGGCGATCAGGCGCCGGATGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAg                                                                                                                                            >  1:662124/1‑126 (MQ=255)                               gcCGGTTTGCGCGCGGTGTGGTTCAACCCGCAGGGCAAGGCCTGGACTGGCGATCAGGCGCCGGATGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAg                                                                                                                                            <  2:662124/126‑1 (MQ=255)                                   gTTTGCGCGCGGTGTGGTTCAACCCGCAGGGCAAGGCCTGGACTGGCGATCAGGCGCCGGATGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGcgggcacgg                                                                                                                >  2:804626/1‑150 (MQ=255)                                        cgcgcgGTGTGGTTCAACCCGCAGGGCAAGGCCTGGACTGGCGATCAGGCGCCGGATGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAac                                                                                                           <  2:931696/150‑1 (MQ=255)                                         gcgcgGTGTGGTTCAACCCGCAGGGCAAGGCCTGGACTGGCGATCAGGCGCCGGATGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAaca                                                                                                          >  2:1009617/1‑150 (MQ=255)                                             ggTGTGGTTCAACCCGCAGGGCAAGGCCTGGACTGGCGATCAGGCGCCGGATGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACgg                                                                                                                                               >  1:468667/1‑109 (MQ=255)                                             ggTGTGGTTCAACCCGCAGGGCAAGGCCTGGACTGGCGATCAGGCGCCGGATGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACgg                                                                                                                                               <  2:468667/109‑1 (MQ=255)                                                   gTTCAACCCGCAGGGCAAGGCCTGGACTGGCGATCAGGCGCCGGATGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCcac                                                                                                <  1:651800/150‑1 (MQ=255)                                                    ttCAACCCGCAGGGCAAGGCCTGGACTGGCGATCAGGCGCCGGATGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACaaaa                                                                                                     >  1:972574/1‑144 (MQ=255)                                                    ttCAACCCGCAGGGCAAGGCCTGGACTGGCGATCAGGCGCCGGATGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACaaaa                                                                                                     <  2:972574/144‑1 (MQ=255)                                                     tCAACCCGCAGGGCAAGGCCTGGACTGGCGATCAGGCGCCGGATGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAg                                                                                              <  1:1009617/150‑1 (MQ=255)                                                       aaCCCGCAGGGCAAGGCCTGGACTGGCGATCAGGCGCCGGATGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGc                                                                                            >  1:454853/1‑150 (MQ=255)                                                        aCCCGCAGGGCAAGGCCTGGACTGGCGATCAGGCGCCGGATGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGcgggcacggg                                                                                                               >  2:1197148/1‑130 (MQ=255)                                                        aCCCGCAGGGCAAGGCCTGGACTGGCGATCAGGCGCCGGATGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGcgggcacggg                                                                                                               <  1:1197148/130‑1 (MQ=255)                                                        aCCCGCAGGGCAAGGCCTGGACTGGCGATCAGGCGCCGGATGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCa                                                                                           >  1:697873/1‑150 (MQ=255)                                                          ccGCAGGGCAAGGCCTGGACTGGCGATCAGGCGCCGGATGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGcgggcacg                                                                                                                 <  1:70668/126‑1 (MQ=255)                                                          ccGCAGGGCAAGGCCTGGACTGGCGATCAGGCGCCGGATGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGcgggcacg                                                                                                                 >  2:70668/1‑126 (MQ=255)                                                          ccGCAGGGCAAGGCCTGGACTGGCGATCAGGCGCCGGATGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATa                                                                                         >  2:1180654/1‑150 (MQ=255)                                                          ccGCAGGGCAAGGCCTGGACTGGCGATCAGGCGCCGGATGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATa                                                                                         >  1:1171516/1‑150 (MQ=255)                                                            gCAGGGCAAGGCCTGGACTGGCGATCAGGCGCCGGATGTCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGa                                                                                                                                             <  1:755784/96‑1 (MQ=255)                                                            gCAGGGCAAGGCCTGGACTGGCGATCAGGCGCCGGATGTCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGa                                                                                                                                             >  2:755784/1‑96 (MQ=255)                                                                      gCCTGGACTGGCGATCAGGCGCCGGATGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTCGCGGCGCCTGCGCGGGCACGGGCAACACAGAACCCACAAGCATAAAAAAGCCCGCa                                                                             >  2:336759/1‑150 (MQ=255)                                                                       ccTGGACTGGCGATCAGGCGCCGGATGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAg                                                                            >  2:310207/1‑150 (MQ=255)                                                                                  gATCAGGCGCCGGATGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGTTCGGTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGc                                                                 <  2:766430/150‑1 (MQ=255)                                                                                      aGGCGCCGGATGCCGAAATCCAGCGCCTGTGGCAGCTGCCCGACGTGCGCGCGCGCTGCCGCGGACGGGAGCCCCTTTGCGGCGCAGTCGCGGGCACGGGCAACACAAAACCCTCAGGCATAAAAAAGCCCGCAGCGACGGAGGGCtttt                                                             <  2:292024/150‑1 (MQ=255)                                                                                        gcgcCGGATGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCtttttt                                                           >  2:230192/1‑150 (MQ=255)                                                                                                  ccGAAATCCAGCGCCTGTCGCAGCGGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGcc                                                 <  1:139546/150‑1 (MQ=255)                                                                                                   cGAAATCCGGCGCCTGTCGCAGCTGCCCGACGTGCACGCGCGCTGGGGCTAACGGGAGCCGCTTTGCGGCCCCTTCGCGGGCACGGGCAACACAAAACACACAGGCGTAAAAACGCCCGCAGCGCCGGCGGCCTTGTTTGCGCTCAGCCa                                                >  2:328883/1‑150 (MQ=255)                                                                                                   cGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCa                                                >  2:1119408/1‑150 (MQ=255)                                                                                                       cgtcagcgccagcgcgcgagcacgtcgggcagctgcgacaggcgctgACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATc                                                     <  1:621625‑M2/94‑1 (MQ=255)                                                                                                       cgtcagcgccagcgcgcgagcacgtcgggcagctgcgacaggcgctgACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATc                                                     >  2:621625‑M2/48‑141 (MQ=255)                                                                                                         tcagcgccagcgcgcgagcacgtcgggcagctgcgacaggcgctgACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACtcaca                                          >  1:843216‑M2/46‑148 (MQ=255)                                                                                                            GCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCATGCTTTTTTGCGATCAGCCACTCAGATAg                                       >  1:336759‑M1/1‑150 (MQ=255)                                                                                                              GCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAggg                                     >  2:322812‑M1/1‑150 (MQ=255)                                                                                                               CCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCCCGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATATGGc                                    <  1:219183‑M1/150‑1 (MQ=255)                                                                                                                         cTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTa                          >  1:719458/1‑150 (MQ=255)                                                                                                                          tGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTAc                         <  1:310207/150‑1 (MQ=255)                                                                                                                          tGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCCGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTAc                         <  2:264138/150‑1 (MQ=255)                                                                                                                               gACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACttgtt                    >  1:1107804/1‑150 (MQ=255)                                                                                                                                      tCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACGGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAggg                                     <  2:693526/126‑1 (MQ=255)                                                                                                                                      tCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAggg                                     >  1:693526/1‑126 (MQ=255)                                                                                                                                      tCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGc             <  2:697873/150‑1 (MQ=255)                                                                                                                                                 cgctgACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCgg  <  1:230192‑M2/145‑1 (MQ=255)                                                                                                                                                 cgctgACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCgg  <  2:454853‑M2/145‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                 CCTGGCGATGACATTGCCGGTGCCCAGCGCGCCGGTTTGCGCGCGGTGTGGTTCAACCCGCAGGGCAAGGCCTGGACTGGCGATCAGGCGCCGGATGCCGAAATCCAGCGCCTGTCGCAGCTGCCCGACGTGCTCGCGCGCTGGCGCTGACGGGAGCCGCTTTGCGGCCCATTCGCGGGCACGGGCAACACAAAACCCACAGGCATAAAAAAGCCCGCAGCGACGGCGGGCTTTTTTGCGATCAGCCACTCAGATAGGGCGGCTGCCGTACTTGTTGTCTGGCTTCTTGGGCGG  >  NC_002947/5965409‑5965702

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.