New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4722310 = | 19 (1.170) | 3 (0.190) | 3/248 | NT | 15.6% | coding (1300/1905 nt) | htpG | chaperone protein HtpG |
? | NC_002947 | 4722348 = | 14 (0.890) | coding (1262/1905 nt) | htpG | chaperone protein HtpG |
ACTTCGGTCAGGTGCTGAAAGAGGGCCCGGCCGAAGACTTCGCCAACAAGGAGAAAATCGCCGGTCTGCTGCGCTTTGCGTCCACCCAGGACGACAGCGGCGAGCAGAGCGTCGCCCTGGCCGACTACCTGGCCCGCGCCAAGGAAGGTCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4722462‑4722310 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggGCGACGCTCTGCTCGCCGCTGTCGTCCTGGGTGGACGCAAAGCGCAGCAGACCGGCGATTTTCTCCTTGTTGGCGAAGTCTTCGGCCGGGCCCTCTTTCAGCACCTGACCGAAGTTTTTCCAGAAGCCCTTGTATTTCTCGGGTTCGTT > NC_002947/4722348‑4722496 ACTTCGGTCAGGTGCTGAAAGAGGGCCCGGCCGAAGACTTCGCCAACAAGGAGAAAATCGCCGGTCTGCTGCGCTTTGCGTCCACCCAGGACGACAGCGGCGAGCAGAGCGTCGCCCTGGCCGACTACCTGGCCCGCGCCAAGGAAGGTC < 1:403622/150‑1 CCTGGCCGACTACCTGGCCCGCGCCAAGGAAGGTCAGGGCGACGCTCTGCTCGCCGCTGTCGTCCTGGGTGGACGCAAAGCGCAGCAGACCGGCGATTTTCTCCTTGTTGGCGAA < 1:61538/115‑1 CCTGGCCGACTACCTGGCCCGCGCCAAGGAAGGTCAGGGCGACGCTCTGCTCGCCGCTGTCGTCCTGGGTGGACGCAAAGCGCAGCAGACCGGCGATTTTCTCCTTGTTGGCGAA > 2:61538/1‑115 TGGCCGACTACCTGGCCCGCGCCAAGGAAGGTCAGGGCGACGCTCTGCTCGCCGCTGTCGTCCTGGGTGGACGCAAAGCGCAGCAGACCGGCGATTTTCTCCTTGTTGGCGAAGTCTTCGGCCGGGCCCTCTCTCAGCACCTGACCGAAG > 2:9944/1‑150 AGGGCGACGCTCTGCTCGCCGCTGTCGTCCTGGGTGGACGCAAAGCGCAGCAGACCGGCGATTTTCTCCTTGTTGGCGAAGTCTTCGGCCGGGCCCTCTTTCAGCACCTGACCGAAGTTTTTCCAGAAGCCCTTGTATTTCTCGGGTTCG > 1:242402/1‑150 GGCGACGCTCTGCTCGCCGCTGTCGTCCTGGGTGGACGCAAAGCGCAGCAGACCGGCGATTTTCTCCTTGTTGGCGAAGTCTTCGGCCGGGCCCTCTTTCAGCACCTGACCGAAGTTTTTCCAGAAGCCCTTGTATTTCTCGGGTTCGTT > 1:267188/1‑150 ACTTCGGTCAGGTGCTGAAAGAGGGCCCGGCCGAAGACTTCGCCAACAAGGAGAAAATCGCCGGTCTGCTGCGCTTTGCGTCCACCCAGGACGACAGCGGCGAGCAGAGCGTCGCCCTGGCCGACTACCTGGCCCGCGCCAAGGAAGGTCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4722462‑4722310 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggGCGACGCTCTGCTCGCCGCTGTCGTCCTGGGTGGACGCAAAGCGCAGCAGACCGGCGATTTTCTCCTTGTTGGCGAAGTCTTCGGCCGGGCCCTCTTTCAGCACCTGACCGAAGTTTTTCCAGAAGCCCTTGTATTTCTCGGGTTCGTT > NC_002947/4722348‑4722496 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |