New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5140177 = | 23 (1.420) | 4 (0.260) | 4/246 | NT | 14.5% | coding (1221/1380 nt) | PP_4524 | sodium‑solute symporter |
? | NC_002947 | 5140211 = | 25 (1.610) | coding (1255/1380 nt) | PP_4524 | sodium‑solute symporter |
CAGCTTCACCGCCGCCACTGACTTGCGCGACACCAGGCTCACGCCCACAAAGCTCACCAGCCCTACTGCCAGGCTGTAGTAGATCGGCGTATTGGCCTCCAGCCCGTCCAGGAACATGAACAGCAGGGCGGTGGCAAAGCCCAGCGACATGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5140330‑5140177 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctgTTCATGTTCCTGGACGGGCTGGAGGCCAATACGCCGATCTACTACAGCCTGGCAGTAGGGCTGGTGAGCTTTGTGGGCGTGAGCCTGGTGTCGCGCAAGTCAGTGGCGGCGG > NC_002947/5140211‑5140322 CAGCTTCACCGCCGCCACTGACTTGCGCGACACCAGGCTCACGCCCACAAAGCTCACCAGCCCTACTGCCAGGCTGTAGTAGATCGGCGTATTGGCCTCCAGCCCGTCCAGGAACATGAACAGCAGGGCGGTGGCAAAGCCCAGCGACAT > 2:264195/1‑150 TTCACCGCCGCCACTGACTTGCGCGACACCAGGCTCACGCCCACAAAGCTCACCAGCCCTACTGCCAGGCTGTAGTAGATCGGCGTATTGGCCTCCAGCCCGTCCAGGAACATGAACAGCAGGGCGGTGGCAAAGCCCAGCGACATGCTG < 1:39018/150‑1 CAGGCTGTAGTAGATCGGCGTATTGGCCTCCAGCCCGTCCAGGAACATGAACAGCAGGGCGGTGGCAAAGCCCAGCGACATGCTG > 1:317305/1‑85 CAGGCTGTAGTAGATCGGCGTATTGGCCTCCAGCCCGTCCAGGAACATGAACAGCAGGGCGGTGGCAAAGCCCAGCGACATGCTG < 2:317305/85‑1 AACAGCAGGGCGGTGGCAAAGCCCAGCGACATGCTGTTCATGTTCCTGGACGGGCTGGAGGCCAATACGCCGATCTACTACAGCCTGGCAGTAGGGCTGGTGAGCTTTGTGGGCGTGAGCCTGGTGTCGCGCAAGTCAGTGGCGGCGG > 1:234371/1‑148 AACAGCAGGGCGGTGGCAAAGCCCAGCGACATGCTGTTCATGTTCCTGGACGGGCTGGAGGCCAATACGCCGATCTACTACAGCCTGGCAGTAGGGCTGGTGAGCTTTGTGGGCGTGAGCCTGGTGTCGCGCAAGTCAGTGGCGGCGG < 2:234371/148‑1 AGCAGGGCGGTGGCAAAGCCCAGCGACATGCTGTTCATGTTCCTGGACGGGCTGGAGGCCAATACGCCGATCTACTACAGCCTGGCAGTAGGGCTGGTGAGCTTTGTGGGC < 1:331287/111‑1 AGCAGGGCGGTGGCAAAGCCCAGCGACATGCTGTTCATGTTCCTGGACGGGCTGGAGGCCAATACGCCGATCTACTACAGCCTGGCAGTAGGGCTGGTGAGCTTTGTGGGC > 2:331287/1‑111 CAGCTTCACCGCCGCCACTGACTTGCGCGACACCAGGCTCACGCCCACAAAGCTCACCAGCCCTACTGCCAGGCTGTAGTAGATCGGCGTATTGGCCTCCAGCCCGTCCAGGAACATGAACAGCAGGGCGGTGGCAAAGCCCAGCGACATGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5140330‑5140177 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctgTTCATGTTCCTGGACGGGCTGGAGGCCAATACGCCGATCTACTACAGCCTGGCAGTAGGGCTGGTGAGCTTTGTGGGCGTGAGCCTGGTGTCGCGCAAGTCAGTGGCGGCGG > NC_002947/5140211‑5140322 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |