New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5140177 =	23 (1.420)	4 (0.260)	4/246	NT	14.5%	coding (1221/1380 nt)	PP_4524	sodium‑solute symporter
	?	NC_002947	5140211 =	25 (1.610)					coding (1255/1380 nt)	PP_4524	sodium‑solute symporter

TGAATGATGTGATCAACGCCCTGACCCTGGCTTATAACCTGCTGGTCGGCGGCATGCTGATCCCGCTGATCGGGGCGATCTTCTGGAAGCGTGCGACCACTGCAGGCGCGATTGCCAGCATGTCGCTGGGCTTTGCCACCGCCCTGCTGTTCATGTTCCTGGACGGGCTGGAGGCCAATACGCCGATCTACTACAGCCTGGCAGTAGGGCTGGTGAGCTTTGTGGGCGTGAGCCTGGTGTCGCGCAAGTCAGTGGCGGCGGTGAAGCTGGCCTGACTGCTGTACCG  >  NC_002947/5140062‑5140347                                                                                                                                                      |                                                                                                                                         tGAATGATGTGATCAACGCCCTGACCCTGGCTTATAACCTGCTGGTCGGCGGCATGCTGATCCCGCTGATCGGGGCGATCTTCTGGAAGCGTGCGACCACTGCAGGCGCGATTGCCAGCATGTCGCTGGGCTTTGCCACCGCCCTGCTGt                                                                                                                                          >  2:123840/1‑150 (MQ=255)    ccgccgccactgacttgcgcgacaccaggctcacgcccacaaagctcaccagccctactgccaggctgtagtagatcggcgtattggcctccagcccgtccaggaacatgaaCAGCATGTCGCTGGGCTTTGCCACCGCCCTGCTGtt                                                                                                                                         >  1:234371‑M1/113‑148 (MQ=255)    ccgccgccactgacttgcgcgacaccaggctcacgcccacaaagctcaccagccctactgccaggctgtagtagatcggcgtattggcctccagcccgtccaggaacatgaaCAGCATGTCGCTGGGCTTTGCCACCGCCCTGCTGtt                                                                                                                                         <  2:234371‑M1/36‑1 (MQ=255)     tgatgTGATCAACGCCCTGACCCTGGCTTATAACCTGCTGGTCGGCGGCATGCTGATCCCGCTGATCGGGGCGATCTTCTGGAAGCGTGCGACCACTGCAGGCGCGATTGCCAGCATGTCGCTGGGCTTTGCCACCGCCCTGCTGTTCAt                                                                                                                                      <  2:224288/150‑1 (MQ=255)            aTCAACGCCCTGACCCTGGCTTATAACCTGCTGGTCGGCGGCATGCTGATCCCGCTGATCGGGGCGATCTTCTGGAAGCGTGCGACCACTGCAGGCGCGATTGCCAGCATGTCGCTGGTCTTTGCCACCGCCCTGCTGTTCATTTTGCTg                                                                                                                               >  2:90910/1‑150 (MQ=255)            aTCAACGCCCTGACCCTGGCTTATAACCTGCTGGTCGGCGGCATGCTGATCCCGCTGATCGGGGCGATCTTCTGGAAGCGTGCGACCACTGCAGGCGCGATTGCCAGCATGTCGCTGGGCTTTGCCACCGCCCTGCTGTTCATGTTCCt                                                                                                                                >  2:293049/1‑149 (MQ=255)            aTCAACGCCCTGACCCTGGCTTATAACCTGCTGGTCGGCGGCATGCTGATCCCGCTGATCGGGGCGATCTTCTGGAAGCGTGCGACCACTGCAGGCGCGATTGCCAGCATGTCGCTGGGCTTTGCCACCGCCCTGCTGTTCATGTTCCt                                                                                                                                <  1:293049/149‑1 (MQ=255)                    ccTGACCCTGGCTTATAACCTGCTGGTCGGCGGCATGCTGATCCCGCTGATCGGGGCGATCTTCTGGAAGCGTGCGACCACTGCAGGCGCGATTGCCAGCATGTCGCTGGGCTTTGCCACCGCCCTGCTGTTCATGTTCCTGGACGGGCt                                                                                                                       >  2:277869/1‑150 (MQ=255)                        aCCCTGGCTTATAACCTGCTGGTCGGCGGCATGCTGATCCCGCTGATCGGGGCGATCTTCTGGAAGCGTGCGACCACTGCAGGCGCGATTGCCAGCATGTCGCTGGGCTTTGCCACCGCCCTGCTGTTCATGTTCCTGGACGGGCTGGAg                                                                                                                   <  1:130909/150‑1 (MQ=255)                         cccTGGCTTATAACCTGCTGGTCGGCGGCATGCTGATCCCGCTGATCGGGGCGATCTTCTGGAAGCGTGCGACCACTGCAGGCGCGATTGCCAGCATGTCGCTGGGCTTTGCCACCGCCCTGCTGTTCATGTTCCTGGACGGGCTGGAgg                                                                                                                  <  1:123840/150‑1 (MQ=255)                          ccTGGCTTATAACCTGTTGGTCGGCGGCATGCTGATCCCGCTGATCGGGGCGATCTTCTGGAAGCGTGCGACCACTGCAGGCGCGATTGCCAGCATGTCGCTGGGCTTTGCCACCGCCCTGCTGTTCATGTTCCTGGACGGGCTGGAGGc                                                                                                                 >  1:55761/1‑150 (MQ=255)                              gCTTATAACCTGCTGGTCGGCGACATGCTGATCCCGCTGATCGGGGCGATCTTCTGGAAGCGTGCGACCACTGCAGGCGCGATTGCCAGCATGTCGCTGGGCTTTGCCCCCTTCCTGCTGTTCATGTTCCTGGACGGGCTGGAGGCCAAt                                                                                                             >  1:227919/1‑150 (MQ=255)                                   taACCTGCTGGTCGGCGGCATGCTGATCCCGCTGATCGGGGCGATCTTCTGGAAGCGTGCGACCACTGCAGGCGCGATTGCTAGCATGTCGCGGTGCTTTGCCACCGGCCTGCGGTTCGTGTGTCTGTACTGGTGTGGGGCCAATACGca                                                                                                        >  2:427066/1‑149 (MQ=255)                                       ctgctgGTCGGCGGCATGCTGATCCAGCGAAGCGGGGCGATCTTCTGGAAGCGTGCGACCACTGCAGGCGCGATTGCCAGCATGTCGCTGGGCTTTGCCACCGCCCTGCTGTTCATGATCCTGGACGGGCTGAAGGCCAATACGCCGATc                                                                                                    >  1:11931/1‑150 (MQ=255)                                                      aTGCTGATCCCGCTGATCGGGGCGATCTTCTGGAAGCGTGCGACCACTGCAGGCGCGGGTGCCAGCATGTCGCTGGGCTTTGCCACCGCCCTGCTGTTCATGTTCCTGGACGGGCTGGAGGCCAATACGCCGATCTACTACAGCCTGGCa                                                                                     <  2:60735/150‑1 (MQ=255)                                                         cTGATCCCGCTGATCGGGGCGATCTTCTGGAAGCGTGCGACCACTGCAGGCGCGATTGCCAGCATGTCGCTGGGCTTTGCCACCGCCCTGCTGTTCATGTTCCTGGACGGGCTGGAGGCCAATACGCCGATCTACTACAGCCTGGCAGTa                                                                                  <  2:264078/150‑1 (MQ=255)                                                            aTCCCGCTGATCGGGGCGATCTTCTGGAAGCGTGCGACCACTGCAGGCGCGATTGCCAGCATGTCGCTGGGCTTTGCCACCGCCCTGCTGTTCATGTTCCTGGACGGGCTGGAGGCCAATACGCCGATCTACTACAGCCTGGCAGTAggg                                                                               >  1:95679/1‑150 (MQ=255)                                                                            cGATCTTCTGGAAGCGTGCGACGACTGCAGGCGCTATGGCCAGCATTTCGCTGGGCTTTGCCACCGCCCTGCTGTTCATGTTCCTGGACGGGCTGGAGGCCAATACGCCGATCTACTACAGCCTGGCAGTAGCGCTGGTGAGCTTTGTgg                                                               <  2:227919/150‑1 (MQ=255)                                                                            cGATCTTCTGGAAGCGTGCGACCACTGCAGGCGCGATTGCCAGCATGTCGCTGGGCTTTGCCACCGCCCTGCTGTTCATGTTCCTGGACGGGCTGGAGGCCAATACGCCGATCTACTACAGCCTGGCAGTAGGGCTGGTGAGCTTTGTgg                                                               <  1:32145/150‑1 (MQ=255)                                                                                    tGGAAGCGTGCGACCACTGCAGGCGCGATTGCCAGCATGTCGCTGGGCTTTGCCACCGCCCTGCTGTTCATGTTCCTGGACGGGCTGGAGGCCAATACGCCGATCTACTACAGCCTGGCAGTAGGGCTGGTGAGCttt                                                                   >  1:294581/1‑138 (MQ=255)                                                                                    tGGAAGCGTGCGACCACTGCAGGCGCGATTGCCAGCATGTCGCTGGGCTTTGCCACCGCCCTGCTGTTCATGTTCCTGGACGGGCTGGAGGCCAATACGCCGATCTACTACAGCCTGGCAGTAGGGCTGGTGAGCttt                                                                   <  2:294581/138‑1 (MQ=255)                                                                                                         ggCGCGATTGCCAGCATGTCGCTGGGCTTTGCCACCGCCCTGCTGTTCATGTTCCTGGACGGGCTGGAGGCCAATACGCCGATCTACTACAGCCTGGCAGGAGGGCTGGTGAGCTTTGTGGGCGTGAGCCTGGTGTCGCGCAAGTCAGTg                                  >  2:162807/1‑150 (MQ=255)                                                                                                          gcgcGATTGCCAGCATGTCGCTGGGCTTTGCCACCGCCCTGCTGTTCATGTTCCTGGACGGGCTGGAGGCCAATACGCCGATCTACTACAGCCTGGCAGTAGGGCTGGTGAGCTTTGTGGGCGTGAGCCTGGTGTCGCGCAAGTCAGTgg                                 >  2:297149/1‑150 (MQ=255)                                                                                                                ttGCCAGCATGTCGCTGGGCTTTGCCACCGCCCTGCTGTTCATGTTCCTGGACGGGCTGGAGGCCAATACGCCGATCTACTACAGCCTGGCAGTAGGGCTGGTGAGCTTTGTGGGCGTGAGCCTGGTGTCGCGCAAGTCAGTGGcggcgg                           <  1:297149/150‑1 (MQ=255)                                                                                                                  aacagcagggcggtggcaaagcccagcgacatgctgTTCATGTTCCTGGACGGGCTGGAGGCCAATACGCCGATCTACTACAGCCTGGCAGTAGGGCTGGTGAGCTTTGTGGGCGTGAGCCTGGTGTCGCGCAAGTCAGTGGcggcgg                           >  1:234371‑M2/37‑148 (MQ=255)                                                                                                                  aacagcagggcggtggcaaagcccagcgacatgctgTTCATGTTCCTGGACGGGCTGGAGGCCAATACGCCGATCTACTACAGCCTGGCAGTAGGGCTGGTGAGCTTTGTGGGCGTGAGCCTGGTGTCGCGCAAGTCAGTGGcggcgg                           <  2:234371‑M2/112‑1 (MQ=255)                                                                                                                    CAGCATGTCGCTGGGCTTTGCCACCGCCCTGCTGTTCATGTTCCTGGACGGGCTGGAGGCCAATACGCCGATCTACTACAGCCTg                                                                                        >  1:317305‑M1/1‑85 (MQ=255)                                                                                                                    CAGCATGTCGCTGGGCTTTGCCACCGCCCTGCTGTTCATGTTCCTGGACGGGCTGGAGGCCAATACGCCGATCTACTACAGCCTg                                                                                        <  2:317305‑M1/85‑1 (MQ=255)                                                                                                                    CAGCATGTCGCTGGGCTTTGCCACCGCCCTGCTGTTCATGTTCCTGGACGGGCTGGAGGCCAATACGCCGATCTACTACAGCCTGGCAGTAGGGCTGGTGAGCTTTGTGGGCGTGAGCCTGGTGTCGCGCAAGTCAGTGGCGGCGGTGaa                       <  1:39018‑M1/150‑1 (MQ=255)                                                                                                                     agcagggcggtggcaaagcccagcgacatgctgTTCATGTTCCTGGACGGGCTGGAGGCCAATACGCCGATCTACTACAGCCTGGCAGTAGGGCTGGTGAGCTTTGTGGGc                                                             >  2:331287‑M2/34‑111 (MQ=255)                                                                                                                     agcagggcggtggcaaagcccagcgacatgctgTTCATGTTCCTGGACGGGCTGGAGGCCAATACGCCGATCTACTACAGCCTGGCAGTAGGGCTGGTGAGCTTTGTGGGc                                                             <  1:331287‑M2/78‑1 (MQ=255)                                                                                                                        ATGTCGCTGGGCTTTGCCACCGCCCTGCTGTTCATGTTCCTGGACGGGCTGGAGGCCAATACGCCGATCTACTACAGCCTGGCAGTAGGGCTGGTGAGCTTTGTGGGCGTGAGCCTGGTGTCGCGCAAGTCAGTGGCGGCGGTGAAGCTg                   >  2:264195‑M1/1‑150 (MQ=255)                                                                                                                             actaggCTTTGCCACGGCCCTGCGGTTCATGTTCCTGGACGGGCTAGCGGCCAATACGCCGATCTACTACAGCCTGGCAGTAGGGCTGGTGAGCTGTGTGGGGGTGAGCCTGGGGTCGCGCAAGTCAGTGGCGACGGTGAAGCTGGccgg              >  2:8564/5‑148 (MQ=255)                                                                                                                              cTGGGCTTTGCCACCGCCCTGCTGTTCATGTTCCTGGACGGGCTGGAGGCCAATACGCCGATCTACTACAGCCTGGCAGTAGGGCTGGTGAGCTTTGTGGGCGTGAGCCTGGTGTCGCGCAAGTCAGTGGCGGCGGTGAAGCTGGCCTGa             <  2:39018/150‑1 (MQ=255)                                                                                                                              cTGGGCTTTGCCACCGCCCTGCTGTTCATGTTCCTGGACGGGCTGGAGGCCAATACGCCGATCTACTACAGCCTGGCAGTAGGGCTGGTGAGCTTTGCGGGCGTGAGCCTGGTGTCGCGCAAGTCAGTGGCGGCGGTGAAGCTGGCCTGa             <  1:277869/150‑1 (MQ=255)                                                                                                                                         cACCGCCCTGCTGTTCATGTTCCTGGACGGGCTGGAGGCCAATACGCCGATCTACTACAGCCTGGCAGTAGGTCTGGTGAGCTTTGTGGGCGTGCGCCTGCTGTCGCGCAAGTCAGTGGCGGCGGGGAAGCTGGCCTGACTGCTGTACCg  >  2:199425/1‑150 (MQ=255)                                                                                                                                         cACCGCCCTGCTGTTCATGTTCCTGGACGGGCTGGAGGCCAATACGCCGATCTACTACAGCCTGGCAGTAGGGCTGGTGAGCTTTGTGGGCGTGAGCCTGGTGTCGCGCAAGTCAGTGGCGGCGGTGAAGCTGGCCTGACTGCTGTACCg  >  2:367073/1‑150 (MQ=255)                                                                                                                                                      |                                                                                                                                         TGAATGATGTGATCAACGCCCTGACCCTGGCTTATAACCTGCTGGTCGGCGGCATGCTGATCCCGCTGATCGGGGCGATCTTCTGGAAGCGTGCGACCACTGCAGGCGCGATTGCCAGCATGTCGCTGGGCTTTGCCACCGCCCTGCTGTTCATGTTCCTGGACGGGCTGGAGGCCAATACGCCGATCTACTACAGCCTGGCAGTAGGGCTGGTGAGCTTTGTGGGCGTGAGCCTGGTGTCGCGCAAGTCAGTGGCGGCGGTGAAGCTGGCCTGACTGCTGTACCG  >  NC_002947/5140062‑5140347

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.