New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5626241 = | 13 (0.800) | 3 (0.200) | 3/242 | NT | 19.2% | coding (1312/1758 nt) | PP_4944 | carbamoyltransferase |
? | NC_002947 | 5626320 = | 13 (0.850) | coding (1233/1758 nt) | PP_4944 | carbamoyltransferase |
CCAGATCATGGTCGATGGCAACCCGGTAGCCTGGTTCCAGGGCCGCATGGAGTTCGGGCCGCGTGCCCTGGGTGGCCGATCGATCATCGGTTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5626335‑5626241 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggttgccATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCTGGTTCGGGTGACGGGCGCAGGCGGCGATCACGTCTTCGTTGGAGTACGACGGGCCGAGGTAGACGTGCTCCATCTTCTCGACCGGAACGC > NC_002947/5626320‑5626468 CCAGATCATGGTCGATGGCAACCCGGTAGCCTGGTTCCAGGGCCGCATGGAGTTCGGGCCGCGTGCCCTGGGTGGCCGATCGATCATCGGTTGCCATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTC > 1:216001/1‑150 GATGGCAACCCGGTAGCCTGGTTCCAGGGCCGCATGGAGTTCGGGCCGCGTGCCCTGGGTGGCCGATCGATCATCGGTTGCCATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCTGGTTCGGGT > 2:120666/1‑150 CCTGGTTCCAGGGCCGCATGGAGTTCGGGCCGCGTGCCCTGGGTGGCCGATCGATCATCGGTTGCCATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCTGGTTCGGGTGACGGGCGCAGGCGGC < 1:120666/150‑1 TTGCCATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCTGGTTCGGGTGACGGGCGCAGGCGGCGATCACGTCTTCGTTGGAGTACGACGGGCCGAGGTAGACGTGCTCCATCTTCTCGACCGGA > 2:276013/1‑150 CATCGACCATGATCTGGGCAATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCTGGTTCGGGTGACGGGCGCAGGCGGCGATCACGTCTTCGTTGTAGTTCGACGGGCCGAGGTAGACGTGCTCCATCTTCTCGACCGGAACGC > 2:12031/1‑150 CCAGATCATGGTCGATGGCAACCCGGTAGCCTGGTTCCAGGGCCGCATGGAGTTCGGGCCGCGTGCCCTGGGTGGCCGATCGATCATCGGTTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5626335‑5626241 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggttgccATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCTGGTTCGGGTGACGGGCGCAGGCGGCGATCACGTCTTCGTTGGAGTACGACGGGCCGAGGTAGACGTGCTCCATCTTCTCGACCGGAACGC > NC_002947/5626320‑5626468 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |