New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5626241 = | 13 (0.800) | 3 (0.200) | 3/242 | NT | 19.2% | coding (1312/1758 nt) | PP_4944 | carbamoyltransferase |
? | NC_002947 | 5626320 = | 13 (0.850) | coding (1233/1758 nt) | PP_4944 | carbamoyltransferase |
GAAAGGTCTCCAGCGTTCACGGAACTTGATCTGGTGGTTGATGCGGTCAGCCACGCCTTCCACGCTTGGGCAACCGATGATCGATCGGCCACCCAGGGCACGCGGCCCGAACTCCATGCGGCCCTGGAACCAGGCTACCGGGTTGCCATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCTGGTTCGGGTGACGGGCGCAGGCGGCGATCACGTCTTCGTTGGAGTACGACGGGCCGAGGTAGACGTGCTCCATCTTCTCGACCGGAACGC > NC_002947/5626173‑5626468 | acccgaaccagccgaagtggcgcaaactcgagaacatgccgcagcagatcgcccagatcatggtcgatGGCAACCGATGATCGATCGGCCACCCAGGGCACGCGGCCCGAACTCCATGCGGCCCTGGAACCAGGCTACCGGGTTGCCATc > 2:120666‑M1/69‑150 (MQ=255) gaagtggcgcaaactcgagaacatgccgcagcagatcgcccagatcatggtcgatGGCAACCGATGATCGATCGGCCACCCAGGGCACGCGGCCCGAACTCCATGCGGCCCTGGAACCAGGCTACCGGGTTGCCATCGACCATGATCTgg > 1:216001‑M1/56‑150 (MQ=255) ccagatcatggtcgatggcaacccggtagcctggttccagggccgcatggagttcgggccgcgtgccctgggtggccgatcgatcatcggttgccATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTc > 1:216001‑M2/96‑150 (MQ=255) aCGCCTTCCACGCTTGGGCAACCGATGATCGATCGGCCACCCAGGGCACGCGGCCCGAACTCCATGCGGCCCTGGAACCAGGCTACCGGGTTGCCATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTc < 2:439771/150‑1 (MQ=255) gCTTGGGCAACCGATGATCGATCGGCCACCCAGGGCACGCGGCCCGAACTCCATGCGGCCCTGGAACCAGGCTACCGGCTTGCCATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCTGGTTCgg > 1:403267/1‑150 (MQ=255) gatggcaacccggtagcctggttccagggccgcatggagttcgggccgcgtgccctgggtggccgatcgatcatcggttgccATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCTGGTTCGGGt > 2:120666‑M2/83‑150 (MQ=255) gatcgatcGGCCACCCAGGGCACGCGGCCCGAACTCCATGCGGCCCTGGAACCAGGCTACCGGGTTGCCATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCTGGTTCGGGTGACGGGCGCAggc > 2:18785/1‑150 (MQ=255) cctggttccagggccgcatggagttcgggccgcgtgccctgggtggccgatcgatcatcggttgccATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCTGGTTCGGGTGACGGGCGCAggcggc < 1:120666‑M2/84‑1 (MQ=255) atcgGCCACCCAGGGCACGCGGCCCGAACTCCATGCGGCCCTGGAACCAGGCTACCGGGTTGCCATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCTGGTTCGGGTGACGGGCGCAGGCGGCGa < 1:437853/150‑1 (MQ=255) cACCCAGGGCACGCGGCCCGAACTCCATGCGGCCCTGGAACCAGGCTACCGGGTTGCCATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCTGGTTCGGGTGACGGGCGCAGGCGGCGATCACGt < 1:183651/150‑1 (MQ=255) cccAGCGCACGCCGCCCAAACTCCATGCGTCCCTGGAACCAGGCTACCGGGTTGCCATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCTGGTTCGGGTGACGGGCGCAGGCGGCGATCACGTCt < 2:428976/150‑1 (MQ=255) ggCACGCGGCCCGAACTCCATGCGGCCCTGGAACCAGGCTACCGGGTTGCCATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCTGGTTCGGGTGACGGGCGCAggcgg < 1:331668/134‑1 (MQ=255) ggCACGCGGCCCGAACTCCATGCGGCCCTGGAACCAGGCTACCGGGTTGCCATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCTGGTTCGGGTGACGGGCGCAggcgg > 2:331668/1‑134 (MQ=255) aCGCGGCTCTAACTCCATGCGGCCCTGGAACCAGGCTACCGGGTTGCCATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCTGGTTCGGGTGACGGGCGCAGGCGGCGATCACGTCTTCGTTGGa < 1:18785/150‑1 (MQ=255) ggCCCGAACTCCATGCGGCCCTGGAACCAGGCTACCGGGTTGCCATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCt > 1:307706/1‑103 (MQ=255) ggCCCGAACTCCATGCGGCCCTGGAACCAGGCTACCGGGTTGCCATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCt < 2:307706/103‑1 (MQ=255) cccGAACTCCATGCGGCCCTGGAACCAGGCTACCGGGTTGCCATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCTGGTTCGGGTGACGGGCGCAGGCGGCGATCACGTCTTCGTTGGAGTacga > 2:243892/1‑150 (MQ=255) cATGCGGCCCTGGAACCAGGCTACCGGGTTGCCATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCTGGTTCGGGTGACGGGCGCAGGCGGCGATCACGTCTTCGTTGGAGTACGACGGGCCGAg < 1:243892/150‑1 (MQ=255) tACCGGGTTGCCATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTGCGGGTGTTTCGGGTGACGGGCGAACGCGCCGATCACCTCTTAGTTGGAGTACGACGGGCACAGGTAGACGTGCCCCGTCGtctc > 2:189169/1‑150 (MQ=255) ttgccATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCTGGTTCGGGTGACGGGCGCAGGCGGCGATCACGTCTTCGTTGGAGTACGACGGGCCGAGGTAGACGTGCTCCATCTTCTCGACCGGa > 2:276013‑M2/6‑150 (MQ=255) cATCGACCATGATCTGGGCAATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCTGGTTCGGGTGACGGGCGCAGGCGGCGATCACGTCTTCGTTGTAGTTCGACGGGCCGAGGTAGACGTGCTCCATCTTCTCGACCGGAACGc > 2:12031‑M2/2‑150 (MQ=255) | GAAAGGTCTCCAGCGTTCACGGAACTTGATCTGGTGGTTGATGCGGTCAGCCACGCCTTCCACGCTTGGGCAACCGATGATCGATCGGCCACCCAGGGCACGCGGCCCGAACTCCATGCGGCCCTGGAACCAGGCTACCGGGTTGCCATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCTGGTTCGGGTGACGGGCGCAGGCGGCGATCACGTCTTCGTTGGAGTACGACGGGCCGAGGTAGACGTGCTCCATCTTCTCGACCGGAACGC > NC_002947/5626173‑5626468 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |