New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5626241 = | 13 (0.800) | 3 (0.200) | 3/242 | NT | 19.2% | coding (1312/1758 nt) | PP_4944 | carbamoyltransferase |
? | NC_002947 | 5626320 = | 13 (0.850) | coding (1233/1758 nt) | PP_4944 | carbamoyltransferase |
TTCGAAGGTGAAGGTCATGAACGGCGCGGGATGGTCGACCTTGATCATCTGCGGGGCGACAGTGTCGAGCATCGACGGGCAGAAAGGTCTCCAGCGTTCACGGAACTTGATCTGGTGGTTGATGCGGTCAGCCACGCCTTCCACGCTTGGGCAACCGATGATCGATCGGCCACCCAGGGCACGCGGCCCGAACTCCATGCGGCCCTGGAACCAGGCTACCGGGTTGCCATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCTGGTTCGG > NC_002947/5626092‑5626385 | ttCGAAGGTGAAGGTCATGAACGGCGCGGGATGGTCGACCTTGATCATCTGCGGGGCGACAGTGTCGAGCATCGACTGGCAGAAAGGTCTCCAGCGTTCACGGAACTTGATCTGGTGGTTGATGCGGTCAGCCACGCCTTCCACGCTggg < 2:425087/150‑1 (MQ=255) gcgttccggtcgagaagatggagcacgtctacctcggcccgtcgaactacaacgaagacgtgatcgccgcctgcgcccgtcacccgaaccagccgaagtggcgcaaactcgagaacatgccgcagcagattgcccagatcatggtcgatg > 2:12031‑M1/150‑150 (MQ=255) gaaggtgaaggtCATGAACGGCGCGGGATGGTCGACCTTGATCATCTGCGGGGCGACAGTGTCGAGCATCGACGGGCAGAAAGGTCTCCAGCGTTCACGGAACTTGATCTGGTGGTTGATGCGGTCAGCCACGCCTTCCACGCTTGGGCa > 1:176271/1‑150 (MQ=255) tccggtcgagaagatggagcacgtctacctcggcccgtcgtactccaacgaagacgtgatcgccgcctgcgcccgtcacccgaaccagccgaagtggcgcaaactcgagaacatgccgcagcagatcgcccagatcatggtcgatGGCaa > 2:276013‑M1/146‑150 (MQ=255) tCATGAACGGCGCGGGATGGTCGACCTTGATCATCTGCGGGGCGACAGTGTCGAGCATCGACGGGCAGAAAGGTCTCCAGCGTTCACGGAACTTGATCTGGTGGTTGATGCGGTCAGCCACGCCTTCCACGCTTGGGCAACCGATgatcg > 1:376761/1‑150 (MQ=255) cATGAACGGCGCGGGATGGTCGACCTTGATCATCTGCGGGGCGACAGTGTCGCGCAACGACGTGCAGAAAGGTCTCCAGCGTTCACGGAACTTGATCTGGTGGTTGATGCGGTCAGCCACGCCTTCCACGCTTGGGCAACCGATgatcga > 2:394691/1‑150 (MQ=255) aTGAACGGCGCGGGATGGTCGACCTTGATCATCTGCGGGGCGACAGTGTCGAGCATCGACGGGCAGAAAGGTCTCCAGCGTTCACGGAACTTGATCTGGTGGTTGATGCGGTCAGCCACGCCTTCCACGCTTGGGCAACCGATgatcgat < 2:376761/150‑1 (MQ=255) tGAACGGCGCGGGATGGTCGACCTTGATCATCTGCGGGGCGACAGTGTCGAGCATCGACGGGCAGAAAGGTCTCCAGCGTTCACGGAACTTGATCTGGTGGTTGATGCGGTCAGCCACGCCTTCCACGCTTGGGCAACCGATgatcgatc < 2:305198/150‑1 (MQ=255) aCGGCGCGGGATGGTCGACCTTGATCATCTGCGGGGCGACAGTGTCGAGCATCGACGGGCAGAAAGGTCTCCAGCGTTCACGGAACTTGATCTGGTGGTTGATGCGGTCAGCCACGCCTTCCACGCTTGGGCAACCGATGATCGATCGGc < 2:127403/150‑1 (MQ=255) ccTTGATCATCTGCGGGGCGACAGTGTCGAGCATCGACGGGCAGAAAGGTCTCCAGCGTTCACGGAACTTGATCTGGTGGTTGATGCGGTCAGCCACGCCTTCCACGCTTgg > 1:393676/1‑112 (MQ=255) ccTTGATCATCTGCGGGGCGACAGTGTCGAGCATCGACGGGCAGAAAGGTCTCCAGCGTTCACGGAACTTGATCTGGTGGTTGATGCGGTCAGCCACGCCTTCCACGCTTgg < 2:393676/112‑1 (MQ=255) tGCGGGGCGACAGTGTCGAGCATCGACGGGCAGAAAGGTCTCCAGCGTTCACGGAACTTGATCTGGTGGTTGATGCGGTCAGCCACGCCTTCCACGCTTGGGCAACCGATGATCGATCGGCCACCCAGGGCACGCGGCCCGAACTCCATg < 2:256597/150‑1 (MQ=255) tgtCGAGCATCGACGGGCAGAAAGGTCTCCAGCGTTCACGGAACTTGATCTGGTGGTTGATGCGGTCAGCCACGCCTTCCACGCTTGGGCAACCGATGATCGATCGGCCACCCAGGGCACGCGGCCCGAACTCCATGCGGCCCTGGAAcc > 1:428976/1‑150 (MQ=255) tgtCGAGCATCGACGGGCAGAAAGGTCTCCAGCGTTCACGGAACTTGATCTGGTGGTTGATGCGGTCAGCCACGCCTTCCACGCTTGGGCAACCGATGATCGATCGGCCACCCAGGGCACGCGGCCCGAACTCCATGCGGCCCTGGAAcc > 2:437853/1‑150 (MQ=255) gccgcctgcgcccgtcacccgaaccagccgaagtggcgcaaactcgagaacatgccgcagcagatcgcccagatcatggtcgatGGCAACCGATGATCGATCGGCCACCCAGGGCACGCGGCCCGAACTCCATGCGGCCCTGGAACCAgg < 1:120666‑M1/66‑1 (MQ=255) gACGGGCAGAAAGGTCTCCAGCGTTCACGGAACTTGATCTGGTGGTTGATGCGGTCAGCCACGCCTTCCACGCTTGGGCAACCGATGATCGATCGGCCACCCAGGGCACGCGGCCCGAACTCCATGCGGCCCTGGAACCAGGCTACCggg < 2:176271/150‑1 (MQ=255) cGGGCAGAAAGGTCTCCAGCGTTCACGGAACTTGATCTGGTGGTTGATGCGGTCAGCCACGCCTTCCACGCTTGGGCAACCGATGATCGATCGGCCACCCAGGGCACGCGGCCCGAACTCCATGCGGCCCTGGAACCAGGCTACCGGGtt < 1:394691/150‑1 (MQ=255) acccgaaccagccgaagtggcgcaaactcgagaacatgccgcagcagatcgcccagatcatggtcgatGGCAACCGATGATCGATCGGCCACCCAGGGCACGCGGCCCGAACTCCATGCGGCCCTGGAACCAGGCTACCGGGTTGCCATc > 2:120666‑M1/69‑150 (MQ=255) aGGTCTCCAGCGTTCACGGAACTTGATCTGGTGGTTGATGCGGTCAGCCACGCCTTCCACGCTTGGGCAACCGATGATCGATCGGCCACCCAgg < 2:354188/94‑1 (MQ=255) aGGTCTCCAGCGTTCACGGAACTTGATCTGGTGGTTGATGCGGTCAGCCACGCCTTCCACGCTTGGGCAACCGATGATCGATCGGCCACCCAgg > 1:354188/1‑94 (MQ=255) gaagtggcgcaaactcgagaacatgccgcagcagatcgcccagatcatggtcgatGGCAACCGATGATCGATCGGCCACCCAGGGCACGCGGCCCGAACTCCATGCGGCCCTGGAACCAGGCTACCGGGTTGCCATCGACCATGATCTgg > 1:216001‑M1/56‑150 (MQ=255) aCGCCTTCCACGCTTGGGCAACCGATGATCGATCGGCCACCCAGGGCACGCGGCCCGAACTCCATGCGGCCCTGGAACCAGGCTACCGGGTTGCCATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTc < 2:439771/150‑1 (MQ=255) gCTTGGGCAACCGATGATCGATCGGCCACCCAGGGCACGCGGCCCGAACTCCATGCGGCCCTGGAACCAGGCTACCGGCTTGCCATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCTGGTTCgg > 1:403267/1‑150 (MQ=255) | TTCGAAGGTGAAGGTCATGAACGGCGCGGGATGGTCGACCTTGATCATCTGCGGGGCGACAGTGTCGAGCATCGACGGGCAGAAAGGTCTCCAGCGTTCACGGAACTTGATCTGGTGGTTGATGCGGTCAGCCACGCCTTCCACGCTTGGGCAACCGATGATCGATCGGCCACCCAGGGCACGCGGCCCGAACTCCATGCGGCCCTGGAACCAGGCTACCGGGTTGCCATCGACCATGATCTGGGCGATCTGCTGCGGCATGTTCTCGAGTTTGCGCCACTTCGGCTGGTTCGG > NC_002947/5626092‑5626385 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |