New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3952497 =	16 (0.990)	3 (0.200)	3/242	NT	18.1%	coding (97/657 nt)	PP_3488	Sco1/SenC family protein
	?	NC_002947	3952532 =	12 (0.780)					coding (62/657 nt)	PP_3488	Sco1/SenC family protein

GCAGCTGGTGTAAATGAAGCCCATGACCACCAGATGGTCACCCACCAGGTCTTTCTCCAGGCGTACCGGCATGCCGTCCTGGTTCAGCAGCGACACATCGGCAAAACGCACACTGGTCTTTTCCTGGTGCGCCGCCGGGGGCTGCCCGGCATGGCCGTCATGCGCGTGACCGGCGTGGGCCATGGCCAGGTGGCTGGCGAATGCCAGGCTCAGGGCCAACAGTGTGCAAGCAGGCTTGGCGTTCATCGCACATTCCTCACGTCAGTCTGGGAAGCGTTGGTTGCAGCAGCCGGCAGAA  >  NC_002947/3952348‑3952645                                                                                                                                                      |                                                                                                                                                     gCAGCTGGTGTAAATGAAGCCCATGACCACCAGATGGTCACCCACCAGGTCTTTCTCCAGGCGTACCGGCATGCCGTCCTGGTTCAGCAGCGACACATCGGCAAAACGCACACTGGTCTTTTCCTGGTGCGCCGCCGGGGGCTGCCCGGc                                                                                                                                                      >  2:83978/1‑150 (MQ=255)              aTGAAGCCCATGACCACCAGATGGTCACCCACCAGGTCTTTCTCCAGGCGTACCGGCATGCCGTCCTGGTTCAGCAGCGACACATCGGCAAAACGCACACTGGTCTTTTCCTGGTGCGCCGCCGGGGGCTGCCCGGCATGGCCGTCATgc                                                                                                                                         <  1:83978/150‑1 (MQ=255)                        tGACCACCAGATGGTCACCCACCAGGTCTTTCTCCAGGCGTACCGGCATGCCGTCCTGGTTCAGCAGCGACACATCGGCAAAACGCACACTGGTCTTTTCCTGGTGCGCCGCCGGGGGCTGCCCGGCATGGCCGTCATGCGCGTGACCgg                                                                                                                               <  1:17689/150‑1 (MQ=255)                          accaccAGATGGTCACCCACCAGGTCTTTCTCCAGGCGTACCGGCATGCCGTCCTGGTTCAGCAGCGACACATCGGCAAAACGCACACTGGTCTTTTCCTGGTGCGCCGCCGGGGGCTGCCCGGCATGGCCGTCATGCGCGTGACCGGCg                                                                                                                             >  2:338276/1‑150 (MQ=255)                                       tgccggctgctgcaaccaacgcttcccagactgacgtgaggaatgtgcgatgaacgccaagcctgcttgcacactgttggccctgagcctggcattcgccagccacctggcCATGGCCGTCATGCGCGTGACCGGCGTGGGCCATGGCCa                                                                                                                >  2:118741‑M1/112‑150 (MQ=255)                                           caccaGGTCTTTCTCCAGGCGTACCGGCATGCCGTCCTGGTTCAGCAGCGACACATCGGCAAAACGCACACTGGTCTTTTCCTGGTGCGCCGCCGGGGGCTGCCCGGCATGGCCGTCATGCGCGTGACCGGCGTGGGCCATGGCCAGGtg                                                                                                            >  2:151367/1‑150 (MQ=255)                                                 gTCTTTCTCCAGGCGTACCGGCATGCCGTCCTGGTTCAGCAGCGACACATCGGCAAAACGCACACTGGTCTTTTCCTGGTGCGCCGCCGGGGGCTGCCCGGCATGGCCGTCATGCGCGTGAcc                                                                                                                                 >  1:24074/1‑123 (MQ=255)                                                 gTCTTTCTCCAGGCGTACCGGCATGCCGTCCTGGTTCAGCAGCGACACATCGGCAAAACGCACACTGGTCTTTTCCTGGTGCGCCGCCGGGGGCTGCCCGGCATGGCCGTCATGCGCGTGAcc                                                                                                                                 <  2:24074/123‑1 (MQ=255)                                                    tttCTGCAGGCGTACCGGCATGCTGTCTTGGTTCAGCAGCGACACATCGGCAAAACGCACACTGGTGTTTTCCTGGTGCGCAGCGGGGGGCTGCCCTGCATGGCCGGCATGCGCGTGACCGGCGTGGGCCATGGCCAGGTGGCTGGCGaa                                                                                                   >  2:213680/1‑150 (MQ=255)                                                                                tGGTTCAGCAGCGACACATCGGCAAAACGCACACTGGTCTTTTCCTGGTGCGCCGCCGGGGGCTGCCCGGCATGGCCGTCATGCGCGTGACCGGCGTGGGCCATGGCCAGGTGGCTGGCGAATGCCAGGCTCAGGGCCAACAGTGTGCaa                                                                       <  1:338276/150‑1 (MQ=255)                                                                                           cGACACATCGGCAAAACGCACACTGGTCTTTTCCTGGTGCGCCGCCGGGGGCTGCCCGGCATGGCCGTCATGCGCGTGACCGGCGTGGGCCATGGCCAGGTGGCTGGCGAATGCCAGGCTCAGGGCCAACAGTGTGCAAGCAGGCTTGGc                                                            <  2:406221/150‑1 (MQ=255)                                                                                                 aTCGGCAAAACGCACACTGGTCTTTTCCTGGTGCGCCGCCGGGGGCTGCCCGGCATGGCCGTCATGCGCGTGACCGGCGTGGGCCATGGCCAGGTGGCTGGCGAATGCCAGGCTCAGGGCCAACAGTGTGCAAGCAGGCTTGGCGTTcct                                                      >  2:223820/1‑148 (MQ=255)                                                                                                              acacTGGTCTTTTCCTGGTGCGCCGCCGGGGGCTGCCCGGCATGGCCGTCATGCGCGTGACCGGCGTGGGCCATGGCCAGGTGGCTGGCGAATGCCAGGCTCAGGGCCAACAGTGTGCAAGCAGGCTTGGCGTTCATCGCACATTCCTCa                                         <  1:151367/150‑1 (MQ=255)                                                                                                                  tGGTCTTTTCCTGGTGCGCCGCCGGGGGCTGCCCGGCATGGCCGTCATGCGCGTGACCGGCGTGGGCCATGGCCAGGTGGCTGGCGAATGCCAGGCTCAGGGCCAACAGTGTGCAAGCAGGCTTg                                                              >  2:216572/1‑125 (MQ=255)                                                                                                                  tGGTCTTTTCCTGGTGCGCCGCCGGGGGCTGCCCGGCATGGCCGTCATGCGCGTGACCGGCGTGGGCCATGGCCAGGTGGCTGGCGAATGCCAGGCTCAGGGCCAACAGTGTGCAAGCAGGCTTg                                                              <  1:216572/125‑1 (MQ=255)                                                                                                                       ttttCCTGGTGCGCCGCCGGGGGCTGCCCGGCATGGCCGTCATGCGCGTGACCGGCGTGGGCCATGGCCAGGTGGCTGGCGAATGCCAGGCTCAGGGCCAACAGTGTGCAAGCAGGCTTGGCGTTCATCGCACATTCCTCACGTCAGTCt                                >  2:127604/1‑150 (MQ=255)                                                                                                                                 ggcattcgccagccacctggcCATGGCCGTCATGCGCGTGACCGGCGTGGGc                                                                                                                        <  2:302153‑M1/31‑1 (MQ=255)                                                                                                                                 ggcattcgccagccacctggcCATGGCCGTCATGCGCGTGACCGGCGTGGGc                                                                                                                        >  1:302153‑M1/22‑52 (MQ=255)                                                                                                                                        cgGGGGCTGCCCGGCATGGCCGTCATGCGCGTGACCGGCGTGGGCCATGGCCAGGTGGCTGGCGAATGCCAGGCTCAGGGCCAACAGTGTGCAAGCAGGCTTGGCGTTCATCGCACATTCCTCACGTCAGTCTGGGAAGCGTTGGTTgca               <  2:109946/150‑1 (MQ=255)                                                                                                                                         gggggCTGCCCGGCATGGCCGTCATGCGCGTGACCGGCGTGGGCCATGGCCAGGTGGCTGGCGAATGCCAGGCTCAGGGCCAACAGTGTGCAAGCAGGCTTGGCGTTCATCGCACATTCCTCACGTCAGTCTGGGAAGCGTTGGTTgcag              <  1:19956/150‑1 (MQ=255)                                                                                                                                                     gCATGGCCGTCATGCGCGTGACCGGCGTGGGCCATGGCCAGGTGGCTGGCGAATGCCAGGCTCAGGGCCAACAGTGTGCAAGCAGGCTTGGCGTTCATCGCACATTCCTCACGTCAGTCTGGGAAGCGTTGGTTGCAGCAGCCGGCAGaa  <  1:213680/150‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                     GCAGCTGGTGTAAATGAAGCCCATGACCACCAGATGGTCACCCACCAGGTCTTTCTCCAGGCGTACCGGCATGCCGTCCTGGTTCAGCAGCGACACATCGGCAAAACGCACACTGGTCTTTTCCTGGTGCGCCGCCGGGGGCTGCCCGGCATGGCCGTCATGCGCGTGACCGGCGTGGGCCATGGCCAGGTGGCTGGCGAATGCCAGGCTCAGGGCCAACAGTGTGCAAGCAGGCTTGGCGTTCATCGCACATTCCTCACGTCAGTCTGGGAAGCGTTGGTTGCAGCAGCCGGCAGAA  >  NC_002947/3952348‑3952645

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.