New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4248757	25 (1.540)	3 (0.190)	3/246	NT	11.1%	coding (1314/2118 nt)	PP_3724	acyl‑CoA synthetase
	?	NC_002947	= 4248799	24 (1.540)					coding (1272/2118 nt)	PP_3724	acyl‑CoA synthetase

AGCGGTACCCGCACAGCCTCGCCCTGGTCCATCAACCGCTGGCGGTTCTTTTGGTAAGCGACGATGCGCCCCCAGGCCGCCAGGCCGTCTTCCACACCCTGCAGGGCAGCGATGCCCCGCGCATGCAGGCGCTCACGCGCACTGGCAGGCAACAGTTCCGGGAAAGCCGAGGTGACGAAGCCGATCTTGCCGTGGCGTTCAACGGCATCGCAGTACAGCCCCAGCAGCAGGTCGCATTCCTTGCGTTCGCCGGTAAACGCCGCCGGGTAGTCCAGCACCA  >  NC_002947/4248656‑4248935                                                                                                                                                |                                                                                                                                         aGCGGTACCCGCACAGCCTCGCCCTGGTCCATCAACCGCTGGCGGTTCTTTTGGTAAGCGACGATGCGCCCCCAGGCCGCCAGGCCGTCTTCCACACCCTGCAGGGCAGCGATGCCCCGCGCATGCAGGCGCTCACGCGCACTggcaggc                                                                                                                                    >  1:107928/1‑150 (MQ=255)         ccGCACAGCCTCGCCCTGGTCCATCAACCGCTGGCGGTTCTTTTGGTAAGCGACGATGCGCCCCCAGGCCGCCAGGCCGTCTTCCACACCCTGCAGGGCAGCGATGCCCCGCGCATGCAGGCGCTCACGCGCACTGGCAGGCAACAGTTc                                                                                                                            >  2:353268/1‑150 (MQ=255)           gCACAGCCTCGCCCTGGTCCATCAACCGCTGGCGGTTCTTTTGGTAAGCGACGATGCGCCCCCAGGCCGCCAGGCCGTCTTCCACACCCTGCAGGGCAGCGATGCCCCGCGCATGCAGGCGCTCACGCGCACTGGCAGGCAACAGTTCCg                                                                                                                          <  2:6451/150‑1 (MQ=255)                       ccTGGTCCATCAACCGCTGGCGGTTCTTTTGGTAAGCGACGATGCGCCCCCAGGCCGCCAGGCCGTCTTCCACACCCTGCAGGGCAGCGATGCCCCGCGCATGCAGGCGCTCACGCGCACTGGCAGGCAACAGTTCCGGGAAAGCCGAgg                                                                                                              >  1:172343/1‑150 (MQ=255)                         tGGTCCATCAACCGCTGGCGGTTCTTTTGGTAAGAGACGATGCGCGCCCAGGCCGCCAGGCCGTCTTCCACACCCTGCAGGGCAGCTATGCCCCGCGCATGCAGGCGCTCACGCGCACTGGCAGGCAACAGTTCCGGGAAAGCCGAgcag                                                                                                            >  2:121119/1‑147 (MQ=255)                                   aCCGCTGGCGGTTCTTTTGGTAAGCGACGATGCGCCCCCAGGCCGCCAGGCCGTCTTCCACACCCTGCAGGGCAGCGATGCCCCGCGCATGCAGGCGCTCACGCGCACTGGCAGGCAACAGTTCCGGGAAAGCCGAGGTGACGAAGCCGa                                                                                                  <  1:207333/150‑1 (MQ=255)                                               tCTTTTGGTAAGCGACGATGCGCCCCCAGGCCGCCAGGCCGTCTTCCACACCCTGCAGGGCAGCGATGCCCCGCGCATGCAGGCGCTCACGCGCACTGGCAGGCAACAGTTCCGGGAAAGCCGAGGTGACGAAGCCGATCTTGCCGTGGc                                                                                      <  1:369235/150‑1 (MQ=255)                                                     ggTAAGCGAGGATGCGCCCCCAGGCCGCCAGGCCGTCTTCCACACCCTGCAGGGCAGCGATGCCCCGCGCATGCAGGCGCTCACGCGCACTGGCAGGCAACAGTTCCGGGAAAGCCGAGGTGACGAAGCCGATCTTGCCGTGGCGTTCaa                                                                                <  1:353268/150‑1 (MQ=255)                                                            gacgaTGCGCCCCCAGGCCGCCAGGCCGTCTTCCACACCCTGCAGGGCAGCGATGCCCCGCGCATGCAGGCGCTCACGCGCACTGGCAGGCAACAGTTCCGGGAAAGCCGAGGTGACGAAGCCGATCTTGCCGTGGCGTTCAACGGCATc                                                                         >  2:342396/1‑150 (MQ=255)                                                               gaTGCGCCCCCAGGCCGCCAGGCCGTCTTCCACACCCTGCAGGGCAGCGATGCCCCGCGCATGCAGGCGCTCACGCGCACTGGCAGGCAACAGTTCCGGGAAAGCCGAGGTGACGAAGCCGATCTTGCCGTGGCGTTCAACGGCATCGCa                                                                      <  2:107928/150‑1 (MQ=255)                                                                aTGCGCCCCCAGGCCGCCAGGCCGTCTTCCACACCCTGCAGGGCAGCGATGCCCCGCGCATGCAGGCGCTCACGCGCACTGGCAGGCAACAGTTCCGGGAAAGCCGAGGTGACGAAGCCGAGCTTGCCGTGGCGTTCAACGGCATCGCAg                                                                     <  1:303758/150‑1 (MQ=255)                                                                    gcCCCCAGGCCGCCAGGCCGTCTTCCACACCCTGCAGGGCAGCGATGCCCCGCGCATGCAGGCGCTCACGCGCACTGGCAGGCAACAGTTCCGGGAAAGCCGAGGTGACGAAGCCGATCTTGCCGTGGCGTTCAACGGCATCGCAGTACa                                                                 >  1:122604/1‑150 (MQ=255)                                                                               gccaggccgTCTTCCACACCCTGCAGGGCAGCGATGCCCCGCGCATGCAGGCGCTCACGCGCACTGGCAGGCAACAGTTCCGGGAAAGCCGAGGTGACGAAGCCGATCTTGCCGTGGCGTTCAACGGCATCGCAGTACAGccc                                                             <  1:383/143‑1 (MQ=255)                                                                               gccaggccgTCTTCCACACCCTGCAGGGCAGCGATGCCCCGCGCATGCAGGCGCTCACGCGCACTGGCAGGCAACAGTTCCGGGAAAGCCGAGGTGACGAAGCCGATCTTGCCGTGGCGTTCAACGGCATCGCAGTACAGccc                                                             >  2:383/1‑143 (MQ=255)                                                                                ccaggccgTCTTCCACACCCTGCAGGGCAGCGATGCCCCGCGCATGCAGGCGCTCACGCGCACTGGCAGGCAACAGTTCCGGGAAAGCCGAGGTGACGAAGCCGATCTTGCCGTGGCGTTCAACGGCATCGCAGTACAGCCCcagcagca                                                     >  2:231310/1‑150 (MQ=255)                                                                                      cgTCTTCCACACCCTGCAGGGCAGCGATGCCCCGCGCATGCAGGCGCTCACGCGCACTGgca                                                                                                                                       >  1:396310‑M2/1‑59 (MQ=255)                                                                                      cgTCTTCCACACCCTGCAGGGCAGCGATGCCCCGCGCATGCAGGCGCTCACGCGCACTGgca                                                                                                                                       <  2:396310‑M2/62‑4 (MQ=255)                                                                                      cgTCTTCCACACCCTGCAGGGCAGCGATGCCCCGCGCATGCAGGCGCTCACGCGCACTGGCAGGCAACAGTTCCGGGAAAGCCGAGGTGACGAAGCCGATCTTGCCGTGGCGTTCAACGGCATCGCAGTACAg                                                                <  2:28370/133‑1 (MQ=255)                                                                                      cgTCTTCCACACCCTGCAGGGCAGCGATGCCCCGCGCATGCAGGCGCTCACGCGCACTGGCAGGCAACAGTTCCGGGAAAGCCGAGGTGACGAAGCCGATCTTGCCGTGGCGTTCAACGGCATCGCAGTACAg                                                                >  1:28370/1‑133 (MQ=255)                                                                                      cgTCTTCCACACCCTGCAGGGCAGCGATGCCCCGCGCATGCAGGCGCTCACGCGCACTGGCAGGCAACAGTTCCGGGAAAGCCGAGGTGACGAAGCCGATCTTGCCGTGGCGTTCAACGGCATCGCAGTACAGCCCcagcagcag                                                    >  1:302816/1‑145 (MQ=255)                                                                                      cgTCTTCCACACCCTGCAGGGCAGCGATGCCCCGCGCATGCAGGCGCTCACGCGCACTGGCAGGCAACAGTTCCGGGAAAGCCGAGGTGACGAAGCCGATCTTGCCGTGGCGTTCAACGGCATCGCAGTACAGCCCcagcagcag                                                    <  2:302816/145‑1 (MQ=255)                                                                                             cacaCCCTGCAGGGCAGCGATGCCCCGCGCATGCAGGCGCTCACGCGCACTGgcagggtgtggaagacggcctggcggcctgggggcgcatcgtcgcttaccaaaagaaccgcca                                                                           >  2:169345‑M2/1‑52 (MQ=255)                                                                                             cacaCCCTGCAGGGCAGCGATGCCCCGCGCATGCAGGCGCTCACGCGCACTGgcagggtgtggaagacggcctggcggcctgggggcgcatcgtcgcttaccaaaagaaccgcca                                                                           <  1:169345‑M2/115‑64 (MQ=255)                                                                                             cacaCCCTGCAGGGCAGCGATGCCCCGCGCATGCAGGCGCTCACGCGCACTGGCAGGCAACAGTTCCGGGAAAGCCGAGGTGACGAAGCCGATCTTGCCGTGGCGTTCAACGGCATCGCAGTACAGCCCCAGCAGCAGGTCGCATTCCtt                                        <  1:231310/150‑1 (MQ=255)                                                                                               cacCCTGCAGGGCAGCGATGCCCCGCGCATGCAGGCGCTCACGCGCACTGGCAGGCAACAGTTCCGGGAAAGCCGAGGTGACGAAGCCGATCTTGCCGTGGCGTTCAACGGCATCGCAGTACAGCCCCAGCAGCAGGTCGCATTCCTTGc                                      <  2:421984/150‑1 (MQ=255)                                                                                                   cTGCAGGGCAGCGATGCCCCGCGCATGCAGGCGCTCACGCGCACTGgcagggtgtggaagacggcctggcggcctgggggcgcatcgtcgcttaccaaaagaaccgccagcggttgatggaccagggcgaggctgtgcgggtaccgcggt                                  <  1:96095‑M2/150‑105 (MQ=255)                                                                                                    tGCAGGGCAGCGATGCCCCGCGCATGCAGGCGCTCACGCGTACTGGCAGGCAACAGTTCCGGGAAAGCCGAGGTGACGAAGCCGATCTTGCCGTGGCGTTCAACGGCATCGCAGTACAGCCCCAGCAGCAGGTCGCATTCCTTGCGTTCg                                 >  1:425620/1‑150 (MQ=255)                                                                                                                    cccGCGCATGCAGGCGCTCACGCGCACTGGCAGGCAACAGTTCCGGGAAAGCCGAGGTGACGAAGCCGATCTTGCCGTGGCGTTCAACGGCATCGCAGTACAGCCCCAGCAGCAGGTCGCATTCCTTGCGTTCGCCGGTAAACGccgccg                 <  1:342396/150‑1 (MQ=255)                                                                                                                                   gcTCACGCGCACTGGCAGGCAACAGTTCCGGGAAAGCCGAGGTGACGAAGCCGATCTTGCCGTGGCGTTCAACGGCATCGCAGTACAGCCCCAGCAGCAGGTCGCATTCCTTGCGTTCGCCGGTAAACGCCGCCGGGTAGTccagcacca  <  2:172343/150‑1 (MQ=255)                                                                                                                                   gcTCACGCGCACTGGCAGGCAACAGTTCCGGGAAAGCCGAGGTGACGAAGCCGATCTTGCCGTGGCGTTCAACGGCATCGCAGTACAGCCCCAGCAGCAGGTCGCATTCCTTGCGTTCGCCGGTAAACGCCGCCGGGTAGTccagcacca  >  1:348242/1‑150 (MQ=255)                                                                                                                                                |                                                                                                                                         AGCGGTACCCGCACAGCCTCGCCCTGGTCCATCAACCGCTGGCGGTTCTTTTGGTAAGCGACGATGCGCCCCCAGGCCGCCAGGCCGTCTTCCACACCCTGCAGGGCAGCGATGCCCCGCGCATGCAGGCGCTCACGCGCACTGGCAGGCAACAGTTCCGGGAAAGCCGAGGTGACGAAGCCGATCTTGCCGTGGCGTTCAACGGCATCGCAGTACAGCCCCAGCAGCAGGTCGCATTCCTTGCGTTCGCCGGTAAACGCCGCCGGGTAGTCCAGCACCA  >  NC_002947/4248656‑4248935

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.