New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 107836 | 25 (1.130) | 4 (0.190) | 4/242 | NT | 12.8% | coding (605/642 nt) | PP_5426 | hypothetical protein |
? | NC_002947 | = 107861 | 31 (1.490) | coding (580/642 nt) | PP_5426 | hypothetical protein |
CGGCAACGGTGATCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTGAACCCGCTCCTACGACGGCCTGCGCCGAACCACCGATGCACCTAGGCCTTGACAGGTATATCAGGCCGGCTGACCCAGCTCGACACCCAGTTGGCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/107682‑107836 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgcgGCGTGGAAGCGCTGGCCGTGCCTGTCGCGCCAACTGGGTGTCGA < NC_002947/107861‑107818 CGGCAACGGTGATCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTGAACCCGCTCCTACGACGGCCTGCGCCGAACCACCGATGCACCTAGGCCTTGACAGGTATATCAGGCCGGCTGACCCAGCTCGACACCCAGTTG < 1:411280/150‑1 GCAACGGTGATCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTGAACCCGCTCCTACGACGGCCTGCGCCGAACCACCGATGCACCTAGGCCTTGACAGGTATATCAGGCCGGCTGACCCAGCTCGACACCCAGTTGGC < 1:290765/150‑1 GCCGGCCCTTTCGCGGGTGAACCCGCTCCTACGACGGCCTGCGCCGAACCACCGATGCACCTAGGCCTTGACAGGTATATCAGGCCGGCTGACCCAGCTCGACACCCAGTTGGCGCGGCGTGGAAGCGCTGGCCGTGCCTGTCGCGCCAA > 2:540397/1‑150 CGCGGGTGAACCCGCTCCTACGACGGCCTGCGCCGAACCACCGATGCACCTAGGCCTTGACAGGTATATCAGGCCGGCTGACCCAGCTCGACACCCAGTTGGCGCGGCGTGGAAGCGCTGGCCGTGCCTGTCGCGCCAACTGGGTGTCGA < 1:540397/150‑1 CGCTCCTACGACGGCCTGCGCCGAACCACCGATGCACCTAGGCCTTGACAGGTATATCAGGCCGGCTGACCCAGCTCGACACCCAGTTGGCGCGGCGTGGAAGCGCTGGCCGTGCCTGTCGCGCCAACTGGGT > 1:160964/1‑133 CGCTCCTACGACGGCCTGCGCCGAACCACCGATGCACCTAGGCCTTGACAGGTATATCAGGCCGGCTGACCCAGCTCGACACCCAGTTGGCGCGGCGTGGAAGCGCTGGCCGTGCCTGTCGCGCCAACTGGGT < 2:160964/133‑1 CGGCAACGGTGATCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCCTTTCGCGGGTGAACCCGCTCCTACGACGGCCTGCGCCGAACCACCGATGCACCTAGGCCTTGACAGGTATATCAGGCCGGCTGACCCAGCTCGACACCCAGTTGGCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/107682‑107836 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgcgGCGTGGAAGCGCTGGCCGTGCCTGTCGCGCCAACTGGGTGTCGA < NC_002947/107861‑107818 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |