| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 422678 = | 26 (1.180) | 4 (0.190) | 4/244 | NT | 13.6% | coding (1273/2787 nt) | PP_0348 | hypothetical protein |
| ? | NC_002947 | 422721 = | 26 (1.240) | coding (1230/2787 nt) | PP_0348 | hypothetical protein | |||||
AGGCATGCGACGCGTGGGCCACGAGATGGTGGAGATGGTCGAGGAAATCAACACCCTCGAAGAGATCGCCCTCAAGAACTTGCCGTGGTTCGATACCGACTACTGGCTGACTGCCCGGGTGATCCATGCCCACGGCAAAGCCATGCCCGCCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/422832‑422678‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgggcAGTCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGAGGGTGTTGATTTCCTCGACCATCTCCACCAT‑CTCGTGGCCCACGCGTCGCATGCCTGCATAGGTGACATAGGATGAGAGGGCGAAGGGAT > NC_002947/422721‑422866 AGGCATGCGACGCGTGGGCCACGAGATGGTGGAGATGGTCGAGGAAATCAACACCCTCGAAGAGATCGCCCTCAAGAACTTGCCGTGGTTCGATACCGACTACTGGCTGACTGCCCGGGTGATCCATGCCCACGGCAAAGCCATGCCCGC < 1:233665/150‑1AGGCATGCGACGCGTGGGCCACGAGATGGTGGAGATGGTCGAGGAAATCAACACCCTCGAAGAGATCGCCCTCAAGAACTTGCCGTGGTTCGATACCGACTACTGGCTGACTGCCCGGGTGATCCATGCCCACGGCAAAGCCATGCCCGC > 2:505186/1‑150 GACTGCCCGGGTGATCCATGCCCACGGCAAAGCCATGCCCGCCGGGCAGTCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGAGGGTGTTGATTTCCTCGAC < 1:559909/122‑1 GACTGCCCGGGTGATCCATGCCCACGGCAAAGCCATGCCCGCCGGGCAGTCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGAGGGTGTTGATTTCCTCGAC > 2:559909/1‑122 TGCCCGGGTGATCCATGCCCACGGCAAAGCCATGCCCGCCGGGCAGTCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGAGGGTGTTGATTTCCTCGACCATCTCCACCAT‑CTCGTGGCCCACGCGTCGC > 1:534862/1‑150 ATCCATGCCCACGGCAAAGCCATGCCCGCCGGGCAGTCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGAGGGTGTTGATTTCCTCGACCATCTCCACCAT‑CTCGTGGCCCACGCGTCGCATGCCCGCAT < 2:534862/150‑1 GGGCAGTCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGAGGGTGTTGATTTCCTCGACCATCTCCACCATAACCCCAGGTCAC‑CGGGGCATGCCTGCATAGGGGACATAGGATGAGAGGGCGAAGGGAT > 2:158434/1‑150 AGGCATGCGACGCGTGGGCCACGAGATGGTGGAGATGGTCGAGGAAATCAACACCCTCGAAGAGATCGCCCTCAAGAACTTGCCGTGGTTCGATACCGACTACTGGCTGACTGCCCGGGTGATCCATGCCCACGGCAAAGCCATGCCCGCCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/422832‑422678‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgggcAGTCAGCCAGTAGTCGGTATCGAACCACGGCAAGTTCTTGAGGGCGATCTCTTCGAGGGTGTTGATTTCCTCGACCATCTCCACCAT‑CTCGTGGCCCACGCGTCGCATGCCTGCATAGGTGACATAGGATGAGAGGGCGAAGGGAT > NC_002947/422721‑422866 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |