New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 938937 = | 21 (0.950) | 3 (0.140) | 3/244 | NT | 14.0% | coding (6688/18933 nt) | PP_0806 | surface adhesion protein |
? | NC_002947 | 938967 = | 17 (0.810) | coding (6658/18933 nt) | PP_0806 | surface adhesion protein |
CGGAACCTTCTTGGTCGACCTCACCCCAGCCGCGCAACCGGGCGAGCAATTGAGCCTGGTGCAGACCGATGCGAGCGGCAACGCCTCTGAAGCCCTGCAATATGAAATCCCGGCAACCACGACCCCAGCCAGCCCAAGCGACCTGGTGGTGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/939091‑938937 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggctgGGGTCGTGGTTGCCGGGATTTCATATTGCAGGGCTTCAGAGGCGTTGCCGCTCGCATCGGTCTGCACCAGGCTCAATTGCTCGCCCGGTTGCGCGGCTGGGGTGAGGTCGACCAAGAAGGTTCCGTTGGCGCCGACTGTGGCGGT > NC_002947/938967‑939111 CGGAACCTTCTTGGTCGACCTCACCCCAGCCGCGCAACCGGGCGAGCAATTGAGCCTGGTGCAGACCGATGCGAGCGGCAACGCCTCTGAAGCCCTGCAATATGAAATCCCGGCAACCACGACCCCAGCCAGCCCAAGCGACCTGGTGGT < 1:291405/150‑1 GAACCTTCTTGGTCGACCTCACCCCAGCCGCGCAACCGGGCGAGCAATTGAGCCTGGTGCAGACCGATGCGAGCGGCAACGCCTCTGAAGCCCTGCAATATGAAATCCCGGCAACCACGACCCCAGCCAGCCCAAGCGACCTGGTGGTGG > 2:280395/1‑150 GCAATTGAGCCTGGTGCAGACCGATGCGAGCGGCAACGCCTCTGAAGCCCTGCAATATGAAATCCCGGCAACCACGACCCCAGCCAGCCCAAGCGACCTGGTGGTG > 1:554985/1‑106 GCAATTGAGCCTGGTGCAGACCGATGCGAGCGGCAACGCCTCTGAAGCCCTGCAATATGAAATCCCGGCAACCACGACCCCAGCCAGCCCAAGCGACCTGGTGGTG < 2:554985/106‑1 CACGACCCCAGCCAGCCCAAGCGACCTGGTGGTGGCTGGGGTCGTGGTTGCCGGGATTTCATATTGCAGGGCTTCAGAGGCGTTGCCGCTCGCATCGGTCTGCACCAGGCTCAATTGCTCGCCCGGTTGCGCGGCTGGGGTGAGGTCGAC > 1:350899/1‑150 CCCCAGCCAGCCCAAGCGACCTGGTGGTGGCTGGGGTCGTGGTTGCCGGGATTTCATATTGCAGGGCTTCAGAGGCGTTGCCGCTCGCATCG > 1:277838/1‑92 CCCCAGCCAGCCCAAGCGACCTGGTGGTGGCTGGGGTCGTGGTTGCCGGGATTTCATATTGCAGGGCTTCAGAGGCGTTGCCGCTCGCATCG < 2:277838/92‑1 GGCTGGGGTCGTGGTTGCCGGGATTTCATATTGCAGGGCTTCAGAGGCGTTGCCGCTCGCATCGGTCTGCACCAGGCTCAATTGCTCGCCCGGTTGCGCGGCTGGGGTGAGGTCGACCAAGAAGGTTCCGTTGGCGCCGACTGTGGCGGT < 2:350899/150‑1 GGCTGGGGTCGTGGTTGCCGGGATTTCATATTGCAGGGCTTCAGAGGCGTTGCCGCTCGCATCGGTCTGCACCAGGCTCAATTGCTCGCCCGGTTGCGCGGCTGGGGTGAGGTCGACCAAGAAGGTTCCGTTGGCGCCGACTGTGGCGGT < 2:497176/150‑1 CGGAACCTTCTTGGTCGACCTCACCCCAGCCGCGCAACCGGGCGAGCAATTGAGCCTGGTGCAGACCGATGCGAGCGGCAACGCCTCTGAAGCCCTGCAATATGAAATCCCGGCAACCACGACCCCAGCCAGCCCAAGCGACCTGGTGGTGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/939091‑938937 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggctgGGGTCGTGGTTGCCGGGATTTCATATTGCAGGGCTTCAGAGGCGTTGCCGCTCGCATCGGTCTGCACCAGGCTCAATTGCTCGCCCGGTTGCGCGGCTGGGGTGAGGTCGACCAAGAAGGTTCCGTTGGCGCCGACTGTGGCGGT > NC_002947/938967‑939111 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |