New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1113981 =	16 (0.730)	3 (0.140)	3/246	NT	16.1%	coding (831/954 nt)	rlmF	ribosomal RNA large subunit methyltransferase F
	?	NC_002947	1114015 =	16 (0.760)					coding (797/954 nt)	rlmF	ribosomal RNA large subunit methyltransferase F

CTGCCGGGCATCGAAGCCGCGTTGAAGAAGTCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1114016‑1113981 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcAGGTTGCTGGCCTTGGACACCAGGCTGGTGAACCAAAGTACCCGTTCGGCGTACTGCACGCTTTCGCCGATCAGCTGGGTGACAAAGCGGATTTCGCCACCCTCGCACCACAGT  >  NC_002947/1114015‑1114128                                                                                                                                                        CTGCCGGGCATCGAAGCCGCGTTGAAGAAGTCCGGCAGGTTGCTGGCCTTGGACACCAGGCTGGTGAACCAAAGTACCCGTTCGGCGTACTGCACGCTTTCGCCGATCAGCTGGGTGACAAAGCGGATTTCGCCACCCTCGCACCACAGT  >  1:262852/1‑150      GGGCATCGAAGCCGCGTTGAAGAAGTCCGGCAGGTTGCTGGCCTTGGACACCAGGCTGGTGAACCAAAGTACCCGTTCGGCGTACTGCACGCTTTCGCCGATCAGCTGGGTGACAAAGCGGA                         >  1:368249/1‑122      GGGCATCGAAGCCGCGTTGAAGAAGTCCGGCAGGTTGCTGGCCTTGGACACCAGGCTGGTGAACCAAAGTACCCGTTCGGCGTACTGCACGCTTTCGCCGATCAGCTGGGTGACAAAGCGGA                         <  2:368249/122‑1                                                                                                                                                        CTGCCGGGCATCGAAGCCGCGTTGAAGAAGTCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1114016‑1113981 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcAGGTTGCTGGCCTTGGACACCAGGCTGGTGAACCAAAGTACCCGTTCGGCGTACTGCACGCTTTCGCCGATCAGCTGGGTGACAAAGCGGATTTCGCCACCCTCGCACCACAGT  >  NC_002947/1114015‑1114128

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.