New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1113981 = | 16 (0.730) | 3 (0.140) | 3/246 | NT | 16.1% | coding (831/954 nt) | rlmF | ribosomal RNA large subunit methyltransferase F |
? | NC_002947 | 1114015 = | 16 (0.760) | coding (797/954 nt) | rlmF | ribosomal RNA large subunit methyltransferase F |
CCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTGCGGCGTCGTCAAGGAAGCTCCAGGCGACCATGCGGCTCTGTTTCTGCCCCTGGCCCATCTCAATGATGCGTACGGCCTTGGCGCCGGACTTCTTCAACGCGGCTTCGATGCCCGGCAGGTTGCTGGCCTTGGACACCAGGCTGGTGAACCAAAGTACCCGTTCGGCGTACTGCACGCTTTCGCCGATCAGCTGGGTGACAAAGCGGATTTCGCCACCCTCGCAC > NC_002947/1113843‑1114122 | ccaggCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTGCGGCGTCGTCAAGGAAGCTCCAGGCGACCATGCGGCTCTGTTTCTGCCCCTGGCCCATCTCAATGATGCGTACGGCCTTGGCGCCGGActtctt > 1:562880/4‑150 (MQ=255) actgtggtgcgagggtggcgaaatccgctttgtcacccagctgatcggcgaaagcgtgcagtacgccgaacgggtactttggttcaccagcctggtgtccaaggccagcaacctGCCGGACTTCTTCAACGCGGCTTCGATGCCCGGCAg > 1:262852‑M1/115‑150 (MQ=255) tccgctttgtcacccagctgatcggcgaaagcgtgcagtacgccgaacgggtactttggttcaccagcctggtgtccaaggccagcaacctGCCGGACTTCTTCAACGCGGCTTCGATGccc > 1:368249‑M1/92‑122 (MQ=255) tccgctttgtcacccagctgatcggcgaaagcgtgcagtacgccgaacgggtactttggttcaccagcctggtgtccaaggccagcaacctGCCGGACTTCTTCAACGCGGCTTCGATGccc < 2:368249‑M1/31‑1 (MQ=255) aaGGAAGCTCCAGGCGACCATGCGGCTCTGTTTCTGCCCCTGGCCCATCTCAATGATGCGTACGGCCTTGGCGCCGGACTTCTTCAACGCGGCTTCGATGCCCGGCAGGTTGCTGGCCTTGGACACCAGGCTGGTGAACCAAAGTACCCg > 1:358101/1‑150 (MQ=255) tCCAGGCGACCATGCGGCTCTGTTTCTGCCCCTGGCCCATCTCAATGATGCGTACGGCCTTGGCGCCGGACTTCTTCAACGCGGCTTCGATTCCCGGCGGGTTGCTGGCCTTGGACACCAGGCTGGTGAACCAAAGTACCCGTTCGGCGt > 1:293449/1‑150 (MQ=255) cATGCGGCTCTGTTTCTGCCCCTGGCCCATCTCAATGATGCGTACGGCCTTGGCGCCGGACTTCTTCAACGCGGCTTCGATGCCCGGCAGGTTGCt < 2:49284/96‑1 (MQ=255) cATGCGGCTCTGTTTCTGCCCCTGGCCCATCTCAATGATGCGTACGGCCTTGGCGCCGGACTTCTTCAACGCGGCTTCGATGCCCGGCAGGTTGCt > 1:49284/1‑96 (MQ=255) aTGCGGCTCTGTTTCTGCCCCTGGCCCATCTCAATGATGCGTACGGCCTTGGCGCCGGACTTCTTCAACGCGGCTTCGATGcc < 2:87666/83‑1 (MQ=255) aTGCGGCTCTGTTTCTGCCCCTGGCCCATCTCAATGATGCGTACGGCCTTGGCGCCGGACTTCTTCAACGCGGCTTCGATGcc > 1:87666/1‑83 (MQ=255) gCTCTGTTTCTGCCCCTGGCCCATCTCAATGATGCGTACGGCCTTGGCGCCGGACTTCTTCAACGCGGCTTCGATGCCCGGCAGGTTGCTGGCCTTGGACACCCGGGTGGTGAACCAAAGTACCCGTTCGGCGTACTGCACGCTTTCGcc > 1:61454/1‑150 (MQ=255) cccTGGCCCATCTCAATGATGCGTACGGCCTTGGCGCCGGACTTCTTCAACGCGGCTTCGATGCCCGGCAGGTTGCTGGCCTTGGACACCAGGCTGGTGAACCAAAGTACCCGTTCGGCGTACTGCACGCTTTCGCCGATCAGCTgg > 1:427088/1‑147 (MQ=255) cccTGGCCCATCTCAATGATGCGTACGGCCTTGGCGCCGGACTTCTTCAACGCGGCTTCGATGCCCGGCAGGTTGCTGGCCTTGGACACCAGGCTGGTGAACCAAAGTACCCGTTCGGCGTACTGCACGCTTTCGCCGATCAGCTgg < 2:427088/147‑1 (MQ=255) cccTGGCCCATCTCAATGATGCGTACGGCCTTGGCGCCGGACTTCTTCAACGCGGCTTCGATGCCCGGCAGGTTGCTGGCCTTGGACACCAGGCTGGTGAACCAAAGTACCCGTTCGGCGTACTGCACGCTTTCGCCGATCAGCTGGGTg > 1:403488/1‑150 (MQ=255) gCCCATCTCAATGATGCGTACGGCCTTGGCGCCGGACTTCTTCAACGCGGCTTCGATGCCCGGCAGGTTGCTGGCCTTGGACACCAGGCTGGTGAACCAAAGTACCCGTTCGGCGTACTGCACGCTTTCGCCGATCAGCGGGGTGACaaa > 1:223485/1‑150 (MQ=255) tACGGCCTTGGCGCCGGACTTCTTCAACGCGGCTTCGATGCCCGGCAGGTTGCTGGCCTTGGACACCAGGCTGGTGAACCAAAGTAccc > 2:273317/1‑89 (MQ=255) tACGGCCTTGGCGCCGGACTTCTTCAACGCGGCTTCGATGCCCGGCAGGTTGCTGGCCTTGGACACCAGGCTGGTGAACCAAAGTAccc < 1:273317/89‑1 (MQ=255) gCCTTGGCGCCGGACTTCTTCAACGCGGCTTCGATGCCCGGCAGGTTGCTGGCCTTGGACACCAGGCTGGTGAACCAAAGTACCCGTTCGGCGTACTGCACGCTTTCGCCGATCAGCTGGGTGACAAAGCGGATTTCGCCACCCTCGcac > 2:141842/1‑150 (MQ=255) gCCTTGGCGCCGGACTTCTTCAACGCGGCTTCGATGCCCGGCAGGTTGCTGGCCTTGGACACCAGGCTGGTGAACCAAAGTACCCGTTCGGCGTACTGCACGCTTTCGCCGATCAGCTGGGTGACAAAGCGGATTTCGACACCCTCGcac < 2:562880/150‑1 (MQ=255) | CCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTGCGGCGTCGTCAAGGAAGCTCCAGGCGACCATGCGGCTCTGTTTCTGCCCCTGGCCCATCTCAATGATGCGTACGGCCTTGGCGCCGGACTTCTTCAACGCGGCTTCGATGCCCGGCAGGTTGCTGGCCTTGGACACCAGGCTGGTGAACCAAAGTACCCGTTCGGCGTACTGCACGCTTTCGCCGATCAGCTGGGTGACAAAGCGGATTTCGCCACCCTCGCAC > NC_002947/1113843‑1114122 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |