New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2503705 | 14 (0.640) | 3 (0.150) | 3/230 | NT | 16.9% | intergenic (+21/‑212) | speB/PP_2197 | agmatinase/hypothetical protein |
? | NC_002947 | = 2503767 | 17 (0.860) | intergenic (+83/‑150) | speB/PP_2197 | agmatinase/hypothetical protein |
TCAACCTGGTAGGCATGGACTTGGTGGAAGTGGCGCCAGCCTATGACCATGCCGATATCACCGCGTTGGCCGGGGCAACCCTGGCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGCGGCCATTCGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2503545‑2503705 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccattcgcgggcGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGTGAGACACGTGTGGGAGCGGGCTTGCCCGCGAATGGCCGCAAAATCTACTGGCCGTTGTCCACCTTGTGCCGCGCCGCATACAGGCACAGCATCTCCATG < NC_002947/2503767‑2503630 TCAACCTGGTAGGCATGGACTTGGTGGAAGTGGCGCCAGCCTATGACCATGCCGATATCACCGCGTTGGCCGGGGCAACCCTGGCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGCGGC > 2:558967/1‑150 GGCATGGACTTGGTGGAAGGGGCGCCAGCCTATGACCATGCCGATATCCCCGCGTTGGCCGGGGCAACCCTGGCCATGGAGATGCTGTGCCGGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGCGGCCATTCGCGGGC < 1:553989/150‑1 CCCTGGCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGCGGCCATTCGCGGGCGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGTGAGACACGTGTGGGAGCGGGCTTGC > 1:136977/1‑147 CCCTGGCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGCGGCCATTCGCGGGCGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGTGAGACACGTGTGGGAGCGGGCTTGC < 2:136977/147‑1 GCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGCGGCCATTCGCGGGCGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGTGAGACACGTGTGGGAGCGGGCTTGCCCGCGAAT < 2:82771/150‑1 ATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGCGGCCATTCGCG < 1:561262/72‑1 ATGGAGATGCTGTGCATGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGCGGCCATTCGCG > 2:561262/1‑72 CCATTCGCGGGCGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGTGAGACACGTGTGGGAGCGGGCTTGCCCGCGAATGGCCGCAAAATCTACTGGCCGTTGTCCACCTTGTGCCACGCCGCATACAGGCACAGCATCTCCATG < 1:152880/150‑1 TCAACCTGGTAGGCATGGACTTGGTGGAAGTGGCGCCAGCCTATGACCATGCCGATATCACCGCGTTGGCCGGGGCAACCCTGGCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGCGGCCATTCGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2503545‑2503705 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccattcgcgggcGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGTGAGACACGTGTGGGAGCGGGCTTGCCCGCGAATGGCCGCAAAATCTACTGGCCGTTGTCCACCTTGTGCCGCGCCGCATACAGGCACAGCATCTCCATG < NC_002947/2503767‑2503630 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |