New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5988340 = | 29 (1.320) | 3 (0.140) | 3/248 | NT | 10.2% | coding (1366/1788 nt) | kefB‑III | glutathione‑regulated potassium/H+ antiporter |
? | NC_002947 | 5988376 = | 25 (1.170) | coding (1402/1788 nt) | kefB‑III | glutathione‑regulated potassium/H+ antiporter |
CGCCCGGGCCAGCACCTTCAGGTGAGGGTACAGACGCTTCACCCGTGCGGCGGTATGAATGGCGGCTTCAGGGTCATCAATGGTGATGATGAAATACTCCGCTTCACCCACCTTGGCGGCGTGCAACACCTCCGGGCGCAGCGGGTCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5988489‑5988340 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccAAGGTGGGTGAAGCGGAGTATTTCATCATCACCATTGATGACCCTGAAGCCGCCATTCATACCGCCGCACGGGTGAAGCGTCTGTACCCTCACCTGAAGGTGCTGGCCCGGGCGCGTAACCGCCAGCATGTGCACAAATTGGCGGATGT > NC_002947/5988376‑5988524 CGCCCGGGCCAGCACCTTCAGGTGAGGGTACAGACGCTTCACCCGTGCGGCGGTATGAATGGCGGCTTCAGGGTCATCAATGGTGATGATGAAATACTCCGCTTCACCCACCTTGGCGGCGTGCAACACCTCCGGGCGCAGCGGGTCGCC < 2:466088/150‑1 CCACCTTGGCGGCGTGCAACACCTCCGGGCGCAGCGGGTCGCCAAGGTGGGTGAAGCGGAGTATTTCATCATCACCATTGATGACCCTGAAGCCGCCATTCATACCGCCGCACGGGTGAAGCGTCTGTACCCTCACCTGAAGGTGCTGGC > 2:169720/1‑150 TTGGCGGCGTGCAACACCTCCGGGCGCAGCGGGTCGCCAAGGTGGGTGAAGCGGAGTATTTCATCATCACCATTGATGACCCTGAAGCCGCCAT > 1:164744/1‑94 TTGGCGGCGTGCAACACCTCCGGGCGCAGCGGGTCGCCAAGGTGGGTGAAGCGGAGTATTTCATCATCACCATTGATGACCCTGAAGCCGCCAT < 2:164744/94‑1 CCAAGGTGGGTGAAGCGGAGTATTTCATCATCACCATTGATGACCCTGAAGCCGCCATTCATACCGCCGCACGGGTGAAGCGTCTGTACCCTCACCTGAAGGTGCTGGCCCGGGCGCGTAACCGCCAGCATGTGCACAAATTGGCGGATG < 1:395299/150‑1 CAAGGTGGGTGAAGCGGAGTATTTCATCATCACCATTGATGACCCTGAAGCCGCCATTCATACCGCCGCACGGGTGAAGCGTCTGTACCCTCACCTGAAGGTGCTGGCCCGGGCGCGTAACCGCCAGCATGTGCACAAATTGGCGGATGT < 2:371666/150‑1 CGCCCGGGCCAGCACCTTCAGGTGAGGGTACAGACGCTTCACCCGTGCGGCGGTATGAATGGCGGCTTCAGGGTCATCAATGGTGATGATGAAATACTCCGCTTCACCCACCTTGGCGGCGTGCAACACCTCCGGGCGCAGCGGGTCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5988489‑5988340 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccAAGGTGGGTGAAGCGGAGTATTTCATCATCACCATTGATGACCCTGAAGCCGCCATTCATACCGCCGCACGGGTGAAGCGTCTGTACCCTCACCTGAAGGTGCTGGCCCGGGCGCGTAACCGCCAGCATGTGCACAAATTGGCGGATGT > NC_002947/5988376‑5988524 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |