New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5988340 = | 29 (1.320) | 3 (0.140) | 3/248 | NT | 10.2% | coding (1366/1788 nt) | kefB‑III | glutathione‑regulated potassium/H+ antiporter |
? | NC_002947 | 5988376 = | 25 (1.170) | coding (1402/1788 nt) | kefB‑III | glutathione‑regulated potassium/H+ antiporter |
ATCGTCGCGCGCATCCTGCGGGCACAGAAGATCCCGTTCATTGCCCTGGAAACCTCGGTGGACACCATCGAGATGACCCGCATGTTCGAACAGGTGCCGGTGTTCTACGGCGACCCGCTGCGCCCGGAGGTGTTGCACGCCGCCAAGGTGGGTGAAGCGGAGTATTTCATCATCACCATTGATGACCCTGAAGCCGCCATTCATACCGCCGCACGGGTGAAGCGTCTGTACCCTCACCTGAAGGTGCTGGCCCGGGCGCGTAACCGCCAGCATGTGCACAAATTGGCGGATGT > NC_002947/5988232‑5988524 | aTCGTCGCGCGCATCCTGCGGGCACAGAAGATCCCGTTCATTGCCCTGGAAACCTCGGTGGACACCATCGAGATGACCCGCATGTTCGAACAGGTGCCGGTGTTCTACGGCGACCCGCTGCGCCCGGAGGTGTTGCACGCCGCCAAggtg < 1:220185/150‑1 (MQ=255) gccagcaccttcaggtgagggtacagacgcttcacccgtgcggcggtatgaatggcggcttcagggtcatcaatggtgatgatgaaatactccgcttcacccaccttGGCGACCCGCTGCGCCCGGAGGTGTTGCACGCCGCCAAggtgg > 2:169720‑M1/108‑150 (MQ=255) gcgcgcATCCTGCGGGCACAGAAGATCCCGTTCATTGCCCTGGAAACCTCGGTGGACACCATCGAGATGACCCGCATGTTCGAACAGGTGCCGGTGTTCTACGGCGACCCGCTGCGCCCGGAGGTGTTGCACGCCGCCAAGGTGGGTGaa < 1:32787/150‑1 (MQ=255) ggCACAGAAGATCCCGTTCATTGCCCTGGAAACCTCGGTGGACACCATCGAGATGACCCGCATGTTCGAACAGGTGCCGGTGTTCTACGGCGACCCGCTGCGCCCGGAGGTGTTGCACGCCGCCAAGGTGGGTGAAGCGGAGTATTtcat > 2:523297/1‑150 (MQ=255) agaagaTCCCGTTCATTGCCCTGGAAACCTCGGTGGACACCATCGAGATGACCCGCATGTTCGAACAGGTGCCGGTGTTCTACGGCGACCCGCTGCGCCCGGAGGTGTTGCACGCCGCCAAGGTGGGTGAAGCGGAGTATTtcatcatca > 1:299555/1‑150 (MQ=255) agaTCCCGTTCATTGCCCTGGAAACCTCGGTGGACACCATCGAGATGACCCGCATGTTCGAACAGGTGCCGGTGTTCTACGGCGACCCGCTGCGCCCGGAGGTGTTGCACGCCGCCAAGGTGGGTGAAGCGGAGTATTTCATCATCACCa < 1:33529/150‑1 (MQ=255) agaTCCCGTTCATTGCCCTGGAAACCTCGGTGGACACCATCGAGATGACCCGCATGTTCGAACAGGTGCCGGTGTTCTACGGCGACCCGCTGCGCCCGGAGGTGTTGCACGCCGCCAAGGTGGGTGAAGCGGAGTATTTCATCATCACCa < 2:256215/150‑1 (MQ=255) tGGAAACCTCGCGGTACACCATAGAGATGACCCGCATTTTCGAACAGGTGCCGGTGTTCTACGTCGACCCGCTGCGCCCGGAGGTGTTGCACGCCGCCAAGGTGGGTGAAGCGGAGTATTTCATCATCACCATTGATGACCCTGAAgccg < 2:70803/150‑1 (MQ=255) gAAACCTCGGTGGACACAATCGAGATGACGCGCATGTTCTAACAGTTGCCGGTGTTCTACGGCGACCCGCTGCGCCCGGAGGTGTTGCACGCCGCCAAGGTGGGTGAAGCGGAGTATTTCATCATCACCATTGATTACCCTGAAgccgcc < 2:429221/150‑1 (MQ=255) atggcggcttcagggtcatcaatggtgatgatgaaatactccgcttcacccaccttGGCGACCCGCTGCGCCCGGAGGTGTTGCACGCCGCCaa > 1:164744‑M1/57‑94 (MQ=255) atggcggcttcagggtcatcaatggtgatgatgaaatactccgcttcacccaccttGGCGACCCGCTGCGCCCGGAGGTGTTGCACGCCGCCaa < 2:164744‑M1/38‑1 (MQ=255) tGGACACCATCGAGATGACCCGCATGTTCGAACAGGTGCCGGTGTTCTACGGCGACCCGCTGCGCCCGGAGGTGTTGCACGCCGCCAAggtgg < 2:428434/93‑1 (MQ=255) tGGACACCATCGAGATGACCCGCATGTTCGAACAGGTGCCGGTGTTCTACGGCGACCCGCTGCGCCCGGAGGTGTTGCACGCCGCCAAggtgg > 1:428434/1‑93 (MQ=255) ccGCATGTTCGAACAGGTGCCGGTGTTCTACGGCGACCCGCTGCGCCCGGAGGTGTTGCACGCCGCCAAGGTGGGTGAAGCGGAGTATTTCATCATCACCATTGATGACCCTGAAGCCGCCATTCATACCGCCGCACGGGTGAAGCGTCt > 2:338551/1‑150 (MQ=255) ccGCATGTTCGAACAGGTGCCGGTGTTCTACGGCGACCCGCTGCGCCCGGAGGTGTTACACGCCGCCAAGGTGGGTGAAGCGGAGTATTTCATCATCACCATTGATGACCCTGAAGCCGCCATTCATACCGCCGCACGGGTGAAGCGTCt > 1:371666/1‑150 (MQ=255) tGTTCGAACAGGTGCCCGTGTTTCGCGGCGACCCGCTGCGCCCGGAGGTGTTGCACGCCGCCAAGGTGGGTGAAGCGGAGTATTTCATCATCACCATTGATGACCCTGAAGCCGCCATTCATACCGCCGCACGGGTGAAGCGTCTGTAcc < 2:411981/150‑1 (MQ=255) ttCGAACAGGTGCCGGTGTTCTACGGCGACCCGCTGCGCCCGGAGGTGTTGCACGCCGCCAAGGTGGGTGAAGCGGAGTATTTCATCATCACCATTGATGACCCTGAAGCCGCCATTCATACCGCCGCACGGGTGAAGCGTCTGTACCCt > 2:132621/1‑150 (MQ=255) cGGTGTTCTACGGCGACCCGCTGCGCCCGGAGGTGTTGCACGACGCCAAGGTGGGTGAAGCGGAGTATTTCATCATCACCATTGATGACCCTGAAGCCGCCATTCATACCGCCGCACGGGTGAAGCGTCTGTACCCTCACCTGAAGGTGc > 1:21636/1‑150 (MQ=255) tgtTCTACGGCGACCCGCTGCGCCCGGAGGTGTTGCACGCCGCCAAGGTGGGTGAAGCGGAGTATTTCATCATCACCATTGATGACCCTGAAGCCGCCATTCATACCGCCGCACGGGTGAAGCGTCTGTACCCTCAcc > 2:7287/1‑138 (MQ=255) tgtTCTACGGCGACCCGCTGCGCCCGGAGGTGTTGCACGCCGCCAAGGTGGGTGAAGCGGAGTATTTCATCATCACCATTGATGACCCTGAAGCCGCCATTCATACCGCCGCACGGGTGAAGCGTCTGTACCCTCAcc < 1:7287/138‑1 (MQ=255) ccaccttggcggcgtgcaacacctccgggcgcagcgggtcgccAAGGTGGGTGAAGCGGAGTATTTCATCATCACCATTGATGACCCTGAAGCCGCCATTCATACCGCCGCACGGGTGAAGCGTCTGTACCCTCACCTGAAGGTGCTGGc > 2:169720‑M2/44‑150 (MQ=255) cTACGGCGACCCGCTGCGCCCGGAGGTGTTGCACGCCACCAAGGTGGGTTAAGCGGAGTATTTCATCATCACCATTGATGACCCTGAAGCCGCCATTCATACCGCCGCACGGGTGAAGCGTCTTTACCCTCACCTGCAGGTGCTGGCCCg > 1:533189/1‑150 (MQ=255) tACGGCGACCCGCTGCGCCCGGAGGTGTTGCACGCCGCCAAGGTGGGTGCAGCGAAACATGTCATCATCAGTTGTAAGGACGCGTAAGCCGCCATTCATACCGCCGCACGGGTGAAGCGTCTGTACCCTCACCTGAAGGTGCTTGCCCgg > 1:69372/1‑150 (MQ=255) tACGGCGACCCGCTGCGCCCGGAGGTGTTGCACGCCGCCAAGGTGGGTGAAGCGGAGTATTTCATCATCACCATTGATGACCCTGAAGCCGCCATTCATACCGCCGCACGGGTGAAGCGTCTGTACCCTCACCTGAAGGTGCTGGCCCgg > 1:135919/1‑150 (MQ=255) ttggcggcgtgcaacacctccgggcgcagcgggtcgccAAGGTGGGTGAAGCGGAGTATTTCATCATCACCATTGATGACCCTGAAGCCGCCAt > 1:164744‑M2/39‑94 (MQ=255) ttggcggcgtgcaacacctccgggcgcagcgggtcgccAAGGTGGGTGAAGCGGAGTATTTCATCATCACCATTGATGACCCTGAAGCCGCCAt < 2:164744‑M2/56‑1 (MQ=255) GGCGACCCGCTGCGCCCGGAGGTGTTGCACGCCGCCAAGGTGGGTGAAGCGGAGTATTTCATCATCACCATTGATGACCCTGAAGCCGCCATTCATACCGCCGCACGGGTGAAGCGTCTGTACCCTCACCTGAAGGTGCTGGCCCGGgcg < 2:466088‑M1/150‑1 (MQ=255) cTGCGCCCGGAGGTGTTGCACGCCGCCAAGGTGGGTGAAGCGGAGTATTTCATCATCACCATTGATGACCCTGAAGCCGCCATTCATACCGCCGCACGGGTGAAGCGTCTGTACCCTCACCTGAAGGTGCTGGCCCGGGCGCGTAACCGc > 1:504672/1‑150 (MQ=255) ccGGAGGTGTTGCACGCCGCCAAGGTGGGTGAAGCGGAGTATTTCATCATCACCATTGATGACCCTGAAGCCGCCATTCATACCGCCGCACGGGTGAAGCGTCTGTACCCTCACCTGAAGGTGCTGGCCCGGGCGCGTAACCGCCAGCAt < 2:504672/150‑1 (MQ=255) ccGGAGGTGTTGCACGCCGCCAAGGTGGGTGAAGCGGAGAAATTGATAAAAATATATGATGACCCTGAAGTCGCCATTCATACCGCCGCAGGGGAAAAGCGTCTGTACCCTCACCAGAAGCTGCTGGCCCGGGCGCGTAACCGCCAGCAt > 1:294436/1‑150 (MQ=255) gtgtTGCACGCCGCCAAGGTGGGTGAAGCGGAGTATTTCATCATCACCATTGATGACCCTGAAGCCGCCATTCATACCGCCGCACGGGTGAAGCGTCTGTACCCTCACCTGaa < 1:428091/113‑1 (MQ=255) gtgtTGCACGCCGCCAAGGTGGGTGAAGCGGAGTATTTCATCATCACCATTGATGACCCTGAAGCCGCCATTCATACCGCCGCACGGGTGAAGCGTCTGTACCCTCACCTGaa > 2:428091/1‑113 (MQ=255) aCGCCGCCAAGGTGGGTGAAGCGGAGTATTTCATCATCACCATTGATGACCCTGAAGCCGCCATTCATACCGCCGCACGGGTGAAGCGTCTGTACCCTCACCTGAAGGTGCTGGCCCGGGCGCGTAACCGCCAGCATGTGCACAAATTgg < 2:299555/150‑1 (MQ=255) gccgccAAGGTGGGTGAAGCGGAGTATTTCATCATCACCATTGATGACCCTGAAGCCGCCATTCATACCGCCGCACGGGTGAAGCGTCTGTACCCTCACCTGAAGGTGCTGGCCCGGGCGCGTAACCGCCAGCATGTGCACAAATTGGCg < 1:466088/150‑1 (MQ=255) gccgccAAGGTGGGTGAAGCGGAGTATTTCATCATCACCATTGATGACCCTGAAGCCGCCATTCATACCGCCGCACGGGTGAAGCGTCTGTACCCTCACCTGAAGGTGCTGGCCCGGGCGCGTAACCGCCAGCATGTGCACAAATTGGCg > 1:38934/1‑150 (MQ=255) gccgccAAGGTGGGTGAAGCGGAGTATTTCATCATCACCATTGATGACCCTGAAGCCGCCATTCATACCGCCGCACGGGTGAAGCGTCTGTACCCTCACCTGAAGGTGCTGGCCCGGGCGCGTAACCGCCAGCATGTGCACAAATTGGCg < 1:338551/150‑1 (MQ=255) ccAAGGTGGGTGAAGCGGAGTATTTCATCATCACCATTGATGACCCTGAAGCCGCCATTCATACCGCCGCACGGGTGAAGCGTCTGTACCCTCACCTGAAGGTGCTGGCCCGGGCGCGTAACCGCCAGCATGTGCACAAATTGGCGGAtg < 1:395299‑M2/148‑1 (MQ=255) cAAGGTGGGTGAAGCGGAGTATTTCATCATCACCATTGATGACCCTGAAGCCGCCATTCATACCGCCGCACGGGTGAAGCGTCTGTACCCTCACCTGAAGGTGCTGGCCCGGGCGCGTAACCGCCAGCATGTGCACAAATTGGCGGAtgt < 2:371666‑M2/149‑1 (MQ=255) | ATCGTCGCGCGCATCCTGCGGGCACAGAAGATCCCGTTCATTGCCCTGGAAACCTCGGTGGACACCATCGAGATGACCCGCATGTTCGAACAGGTGCCGGTGTTCTACGGCGACCCGCTGCGCCCGGAGGTGTTGCACGCCGCCAAGGTGGGTGAAGCGGAGTATTTCATCATCACCATTGATGACCCTGAAGCCGCCATTCATACCGCCGCACGGGTGAAGCGTCTGTACCCTCACCTGAAGGTGCTGGCCCGGGCGCGTAACCGCCAGCATGTGCACAAATTGGCGGATGT > NC_002947/5988232‑5988524 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |