New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3915818 | 32 (1.140) | 3 (0.110) | 3/230 | NT | 10.0% | coding (743/1176 nt) | PP_3455 | multidrug RND transporter membrane fusion protein |
? | NC_002947 | = 3915870 | 24 (0.910) | coding (795/1176 nt) | PP_3455 | multidrug RND transporter membrane fusion protein |
TGCCGATGTCACCCAGTCTACCCGCGAGCTCAACGCCCTGCGCCGCGCCCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3915714‑3915818 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgctgatGTCGGAGAACAGCAGCTTGCCCGGCAGCGGGTAGGCGCTGCCGTCATCCTGGATCAGCGTGGCGCGTGCCTGGCCGTCGCCCACCTGCTGCAATTCGCCGGCGCGCAGGGCGCGGCGCAGGGCGTTGAGCTCGCGGGTAGACTGGGT < NC_002947/3915870‑3915724 TGCCGATGTCACCCAGTCTACCCGCGAGCTCAACGCCCTGCGCCGCGCCCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATGTCGGAGAACAGCAGCTTGCCCGGCAGCGGGTAGGCGCTGCCGTC > 2:110637/1‑150 GTCTACCCGCGAGCTCAACGCCCTGCGCCGCGCCCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATGTCGGAGAACAGCAGCTTGCCCGGCAGCGGGTAGGCGCTGCCGTCATCCTGGATCAGCGT < 1:110637/150‑1 TCTACCCGCGAGCTCAACGCCCTGCGCCGCGCCCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATGTCGGAGAACAGCAGCTTGCCCGGCAGCGGGTAGGCGCTGCCGTCATCCTGGATCAGCGTG < 1:425519/150‑1 ACGCTGATGTCGGAGAACAGCAGCTTGCACGGCACCGGGTAGGCGCTGCCGTCATCCTGGATCAGCGTGGCGCGTGCATGACCGTCGCCCACCCGCTGATATTCGTTGTTGCGCATTGCGCGGCGCAGGGCGTTGAGCTCGCGGGTAGAC < 1:694468/150‑1 CGCTGATGTCGGAGAACAGCAGCTTGCCCGGCAGCGGGTAGGCGCTGCCGTCATCCTGGATCAGCGTGGCGCGTGCCTGGCCGTCGCCCACCTGCTGCAATTCGCCGGCGCGCAGGGCGCGGCGCAGGGCGTTGAGCTCGCGGGTAGACT < 1:742730/150‑1 GATGTCGGAGAACAGCAGCTTGCCCGGCAGCGGGTAGGCGCTGCCGTCATCCTGGATCAGCGTGGCGCGTGCCTGGCCGTCCCCCACCTGCTGCAATTCGCCTGCGCGAAGGGCGCGGCGCAGGGCGTTGAGCTCGCGGGTAGACTGGGT < 2:88521/150‑1 TGCCGATGTCACCCAGTCTACCCGCGAGCTCAACGCCCTGCGCCGCGCCCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3915714‑3915818 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgctgatGTCGGAGAACAGCAGCTTGCCCGGCAGCGGGTAGGCGCTGCCGTCATCCTGGATCAGCGTGGCGCGTGCCTGGCCGTCGCCCACCTGCTGCAATTCGCCGGCGCGCAGGGCGCGGCGCAGGGCGTTGAGCTCGCGGGTAGACTGGGT < NC_002947/3915870‑3915724 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |