New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3915818 | 32 (1.140) | 3 (0.110) | 3/230 | NT | 10.0% | coding (743/1176 nt) | PP_3455 | multidrug RND transporter membrane fusion protein |
? | NC_002947 | = 3915870 | 24 (0.910) | coding (795/1176 nt) | PP_3455 | multidrug RND transporter membrane fusion protein |
ACCCCGCTGGCGACCATCCAGCAGTTGGACCCGATCCATGCCGATGTCACCCAGTCTACCCGCGAGCTCAACGCCCTGCGCCGCGCCCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGACATCAGCGTCGACCCCAGCACCAACCAGATCACCCTGCGCAGCGAGTTCCCCAACCCGGACCTCGACCTGCTGCCAGGCAGCTACGTGCGGGTACG > NC_002947/3915676‑3915965 | accCCGCTGGCGACCATCCAGCAGTTGGACCCGATCCATGCCGATGTCACCCAGTCTACCCGCGAGCTCAACGCCCTGCGCCGCGCCCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGAt < 2:262732/150‑1 (MQ=255) ccccGCTGGCGACCATCCAGCAGTTGGACCCGATCCATGCCGATGTCACCCAGTCTACCCGCGAGCTCAACGCCCTGCGCCGCGCCCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGa > 2:553578/1‑148 (MQ=255) ccccGCTGGCGACCATCCAGCAGTTGGACCCGATCCATGCCGATGTCACCCAGTCTACCCGCGAGCTCAACGCCCTGCGCCGCGCCCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGa < 1:553578/148‑1 (MQ=255) gACCATCCAGCAGTTGGACCCGATCCATGCCGATGTCACCCAGTCTACCCGCGAGCTCAACGCCCTGCGCCGCGCCCTGCGCGCCGGCGAATTGCAACAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAgcgc > 2:166486/1‑150 (MQ=255) cATCCAGCAGTTGGACCCGATCCATGCCGATGTCACCCAGTCTACCCGCGAGCTCAACGCCCTGCGCCGCGCCCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTa < 2:145921/150‑1 (MQ=255) aTCCAGCAGTTGGACCCGATCCATGCCGATGTCACCCAGTCTACCCGCGAGCTCAACGCCCTGCGCCGCGCCCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTAc > 2:255106/1‑150 (MQ=255) agcagTTGGACCCGATCCATGCCGATGTCACCCAGTCTACCCGCGAGCTCAACGCCCTGCGCCGCGCCCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGc > 1:403538/1‑150 (MQ=255) cccGATCCATGCCGATGTCACCCAGTCTACCCGCGAGCTCAACGCCCTGCGCCGCGCCCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCaa > 2:96490/1‑150 (MQ=255) tGCCGATGTCACCCAGTCTACCCGCGAGCTCAACGCCCTGCGCCGCGCCCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATgtcggagaacagcagcttgcccggcagcgggtaggcgctgccgtc > 2:110637‑M1/1‑105 (MQ=255) cGATGTCACCCAGTCTACCCGCGAGCTCAACGCCCTGCGCCGCGCCCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTtctc < 2:623014/150‑1 (MQ=255) aCCCAGTCTACCCGCGAGCTCAACGCCCTGCGCCGCGCCCTTCGCGCAGGCGAATTGCAGCAGGTGGGGGACGGCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGACatc < 2:88521‑M2/150‑4 (MQ=255) aGTCTACCCGCGAGCTCAACGCCCTGCGCCGCGCCCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGACatcagcg < 1:742730‑M2/150‑8 (MQ=255) gTCTACCCGCGAGCTCAACGCCCTGCGCCGCGCCCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATgtcggagaacagcagcttgcccggcagcgggtaggcgctgccgtcatcctggatcagcgt < 1:110637‑M1/150‑61 (MQ=255) gTCTACCCGCGAGCTCAACGCCCTGCGCCGCGCAATGCGCAACAACGAATATCAGCGGGTGGGCGACGGTCATGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGGTGCCGTGCAAGCTGCTGTTCTCCGACatcagcgt < 1:694468‑M2/150‑9 (MQ=255) tCTACCCGCGAGCTCAACGCCCTGCGCCGCGCCCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATgtcggagaacagcagcttgcccggcagcgggtaggcgctgccgtcatcctggatcagcgtg < 1:425519‑M1/150‑62 (MQ=255) tCTACCCGCGAGCTCAACGCCCTGCGCCGCGCCCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGACATCAGCGTc < 1:704857/150‑1 (MQ=255) tCTACCCGCGAGCTCAACGCCCTGCGCCGCGCCCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGACATCAGCGTc < 1:96490/150‑1 (MQ=255) tACCCGCGAGCTCAACGCCCTGCGCCGCGCCCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATCGAGGAAGAGCGTCGTGTCGGGCCGCTGCCTGGCAAGCTGCTGTTCTCCGACATCAGCGTCgg > 2:209601/1‑149 (MQ=255) cTCAACGCCCTGCGCCGCGCCCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGAc < 1:156337/129‑1 (MQ=255) cTCAACGCCCTGCGCCGCGCCCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGAc > 2:156337/1‑129 (MQ=255) aaCGCCCTGCGCCGCGCCCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGACATCAGCGTCGACCCCAGCaccaac > 1:322564/1‑150 (MQ=255) aaCGCCCTGCGCCGCGCCCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGACATCAGCGTCGACCCCAGCaccaac < 1:91024/150‑1 (MQ=255) gCCCTGCGCCGCGCCCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGACATCAGCGTCGACCCCAGCACCAACCAg > 1:104695/1‑150 (MQ=255) gccgcgccCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGACATCAGCGTCGACCCCa < 1:459618/132‑1 (MQ=255) gccgcgccCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGACATCAGCGTCGACCCCa > 2:459618/1‑132 (MQ=255) ccgcgccCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGACATCAGCGTCGACCCCAGCACCAACCAGATCACCCt > 1:155963/1‑150 (MQ=255) cgcgccCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGACATCAGCGTCGACCCCAGCACCAACCAGATCACCCTg > 2:525192/1‑150 (MQ=255) ggCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGACATCAGCGTCGACCCCAGCACCAACCAGATCACCCTGCGCAGCGAGTTcccc < 2:742730/150‑1 (MQ=255) gcagGTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGACATCAGCGTCGACCCCAGCACCAACCAGATCACCCTGCGCAGCGAGTTCCCCAACCCGGAc > 1:296520/1‑148 (MQ=255) gcagGTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGACATCAGCGTCGACCCCAGCACCAACCAGATCACCCTGCGCAGCGAGTTCCCCAACCCGGAc < 2:296520/148‑1 (MQ=255) ggTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGACATCAGCGTCGACCCCAGCACCAACCAGATCACCCTGCGCAGCGAGTTCCCCAACCCGGGCCTCGa < 2:104695/150‑1 (MQ=255) cGACGGCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGACATCAGCGTCGACCCCAGCACCAACCAGATCACCCTGCGCAGCGAGTTCCCCAACCCGGACCTCGACctgct < 1:525192/150‑1 (MQ=255) gCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGACATCAGCGTCGACCCCAGCACCAACCAGCTCACCCTGCGCAGCGAGTTCCCCAACCCGGACCTCGACCTGCTGCCAg < 2:694468/150‑1 (MQ=255) ccAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGACATCAGCGTCGAc > 1:512223/1‑85 (MQ=255) ccAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGACATCAGCGTCGAc < 2:512223/85‑1 (MQ=255) ccAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCGACCCGCTGCCGGGCAAGCTGCTGTTCTCCGACATCAGCGTCGACCCCAGCACCAACCAGATCACCCTGCGCAGCGAGTTCCCCAACCCGGACCTCGACCTGCTGCCAgg < 1:166486/150‑1 (MQ=255) cACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGACATCAGCGTCGACCCCAGCACCAACCAGATCACCCTGCGCAGCGAGTTCCCCAACCCGGACCTCGACCTGCTGCCAGGCAGCt > 1:475865/1‑150 (MQ=255) ccACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGACATCAGCGTCGACCCCAGCACCAACCAGATCACCCTGCGCAGCGAGTTCCCCAACCCGGACCTCGACCTGCTGCCAGGCAGCTACGTGc < 2:322564/150‑1 (MQ=255) cACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGACatcagcgtggcgcgtgcctggccgtcgcccacctgctgcaattcgccggcgcgcagggcgcggcgcagggcgttgagctcgcgggtaga < 1:425519‑M2/150‑90 (MQ=255) aCGCTGATgtcggagaacagcagcttgcacggcaccgggtaggcgctgccgtcatcctggatcagcgtggcgcgtgcatgaccgtcgcccacccgctgatattcgttgttgcgcattgcgcggcgcagggcgttgagctcgcgggtagac < 1:694468‑M1/150‑143 (MQ=255) aCGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGACatcagcgtggcgcgtgcctggccgtcgcccacctgctgcaattcgccggcgcgcagggcgcggcgcagggcgttgagctcgcgggtagac < 1:110637‑M2/150‑91 (MQ=255) cGCTGATgtcggagaacagcagcttgcccggcagcgggtaggcgctgccgtcatcctggatcagcgtggcgcgtgcctggccgtcgcccacctgctgcaattcgccggcgcgcagggcgcggcgcagggcgttgagctcgcgggtagact < 1:742730‑M1/150‑144 (MQ=255) gATgtcggagaacagcagcttgcccggcagcgggtaggcgctgccgtcatcctggatcagcgtggcgcgtgcctggccgtcccccacctgctgcaattcgcctgcgcgaagggcgcggcgcagggcgttgagctcgcgggtagactgggt < 2:88521‑M1/150‑148 (MQ=255) | ACCCCGCTGGCGACCATCCAGCAGTTGGACCCGATCCATGCCGATGTCACCCAGTCTACCCGCGAGCTCAACGCCCTGCGCCGCGCCCTGCGCGCCGGCGAATTGCAGCAGGTGGGCGACGGCCAGGCACGCGCCACGCTGATCCAGGATGACGGCAGCGCCTACCCGCTGCCGGGCAAGCTGCTGTTCTCCGACATCAGCGTCGACCCCAGCACCAACCAGATCACCCTGCGCAGCGAGTTCCCCAACCCGGACCTCGACCTGCTGCCAGGCAGCTACGTGCGGGTACG > NC_002947/3915676‑3915965 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |