New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2907209 | 28 (1.210) | 3 (0.140) | 3/238 | NT | 9.6% | coding (217/1359 nt) | PP_2558 | outer membrane efflux protein |
? | NC_002947 | = 2907231 | 30 (1.360) | coding (195/1359 nt) | PP_2558 | outer membrane efflux protein |
AACGGCTGGCGCAGGCGCACGTTGGCGCCCTTGGAGTCATAGTCGAGGTCATTGTCCTGGCCATTCTGGCGCTGGCTGCCATTGACCTGGTTGAAGTAGGCCGAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2907103‑2907209 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaggcCGGCCTGCTGCCGCAGATCAACGCCTCGGCCTACTTCAACCAGGTCAATGGCAGCCAGCGCCAGAATGGCCAGGACAATGACCTCGACTATGACTCCAAGGGCGCCAACGTGCGCCTGCGCCAGCCGTTGTTCAACAAACAGAAGATG < NC_002947/2907231‑2907084 AACGGCTGGCGCAGGCGCACGTTGGCGCCCTTGGAGTCATAGTCGAGGTCATTGTCCTGGCCATTCTGGCGCTGGCTGCCATTGACCTGGTTGCAGTAGGCCGAGGCCGGCCTGCTGCCGCAGATCAACGCCTCGGCCTACTTCAACCAG < 2:399772/150‑1 ACGTTGGCGCCCTTGGAGTCATAGTCGAGGTCATTGTCCTGGCCATTCTGGCGCTGGCTGCCATTGACCTGGTTGAAGTAGGCCGAGGCCGGCCTGCTGCCGCAGATCAACGCCTCGGCC < 1:303438/120‑1 ACGTTGGCGCCCTTGGAGTCATAGTCGAGGTCATTGTCCTGGCCATTCTGGCGCTGGCTGCCATTGACCTGGTTGAAGTAGGCCGAGGCCGGCCTGCTGCCGCAGATCAACGCCTCGGCC > 2:303438/1‑120 GGCCGGCCTGCTGCCGCAGATCAACGCCTCGGCCTACTTCAACCAGGTCAATGGCAGCCAGCGCCAGAATGGCCAGGACAATGACCTCGACTATGACTCCAAGGGCGCCAACGTGCGCCTGCGCCAGCCGTTGTTCAACAAACAGAAGAT > 2:281164/1‑150 GCCGGCCTGCTGCCGCAGATCAACGCCTCGGCCTACTTCAACCAGGTCAATGGCAGCCAGCGCCAGAATGGCCAGGACAATGACCTCGACTATGACTCCAAGGGCGCCAACGTGCGCCTGCGCCAGCCGTTGTTCAACAAACAGAAGATG < 1:525445/150‑1 AACGGCTGGCGCAGGCGCACGTTGGCGCCCTTGGAGTCATAGTCGAGGTCATTGTCCTGGCCATTCTGGCGCTGGCTGCCATTGACCTGGTTGAAGTAGGCCGAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2907103‑2907209 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaggcCGGCCTGCTGCCGCAGATCAACGCCTCGGCCTACTTCAACCAGGTCAATGGCAGCCAGCGCCAGAATGGCCAGGACAATGACCTCGACTATGACTCCAAGGGCGCCAACGTGCGCCTGCGCCAGCCGTTGTTCAACAAACAGAAGATG < NC_002947/2907231‑2907084 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |