New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3679588 = | 28 (1.210) | 3 (0.140) | 3/240 | NT | 12.0% | coding (305/714 nt) | mgtC | MgtC family magnesium transporter |
? | NC_002947 | 3679620 = | 17 (0.770) | coding (273/714 nt) | mgtC | MgtC family magnesium transporter |
GCGGTGCCAGGCATGGCGCCTGCCGATGCGTCGCGGGTCGCAGCCTATGTGGTGTCGGGCATCGGCTTTCTCGGCGGTGGCGTCATCATGCGCGATGGTTTCAATGTACGTGGCCTGAACACCGCGGCCACCTTGTGGTGCACGGCTGCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3679739‑3679588 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggtGTTCAGGCCACGTACATTGAAACCATCGCGCATGATGACGCCACCGCCGAGAAAGCCGATGCCCGACACCACATAGGCTGCGACCCGCGACGCATCGGCAGGCGCCATGCCTG > NC_002947/3679620‑3679732 GCGGTGCCAGGCATGGCGCCTGCCGATGCGTCGCGGGTCGCAGCCTATGTGGTGTCGGGCATCGGCTTTCTCGGCGGTGGCGTCATCATGCGCGATGGTTTCAATGTACGTGGCCTGAACACCGCGGCCACCTTGTGGTGCACGGCTGCG > 2:549712/1‑150 TGAACACCGCGGCCACCTTGTGGTGCACGGCTGCGGTGTTCAGGCCACNTACATTGAAACCATCGCGCATGATGACGCCACCGCCGAGAAAGCCGATGCCCGACACCACATAGGCTGCGACCCGCGACGCATCGGCAGGCGCCATGCCTG > 1:330369/1‑150 CACCGCGGCCACCTTGTGGTGCACGGCTGCGGTGTTCAGGCCACGTACATTGAAACCATCGCGCATGATGACGCCACCGCCGAGAAAGCCGATGCCCGACACCACATAGGCTGCGACCCGCGACGCATCGG > 1:160767/1‑131 CACCGCGGCCACCTTGTGGTGCACGGCTGCGGTGTTCAGGCCACGTACATTGAAACCATCGCGCATGATGACGCCACCGCCGAGAAAGCCGATGCCCGACACCACATAGGCTGCGACCCGCGACGCATCGG < 2:160767/131‑1 GCGGTGCCAGGCATGGCGCCTGCCGATGCGTCGCGGGTCGCAGCCTATGTGGTGTCGGGCATCGGCTTTCTCGGCGGTGGCGTCATCATGCGCGATGGTTTCAATGTACGTGGCCTGAACACCGCGGCCACCTTGTGGTGCACGGCTGCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3679739‑3679588 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggtGTTCAGGCCACGTACATTGAAACCATCGCGCATGATGACGCCACCGCCGAGAAAGCCGATGCCCGACACCACATAGGCTGCGACCCGCGACGCATCGGCAGGCGCCATGCCTG > NC_002947/3679620‑3679732 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |