New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3679588 = | 28 (1.210) | 3 (0.140) | 3/240 | NT | 12.0% | coding (305/714 nt) | mgtC | MgtC family magnesium transporter |
? | NC_002947 | 3679620 = | 17 (0.770) | coding (273/714 nt) | mgtC | MgtC family magnesium transporter |
TGGCCGGCACCACGTCCTGACGGTCCAGGCGCTGGGCGATATCACGCAACAGGATGTTGGCGCAGAGCACCACCAGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCCGCGGTGTTCAGGCCACGTACATTGAAACCATCGCGCATGATGACGCCACCGCCGAGAAAGCCGATGCCCGACACCACATAGGCTGCGACCCGCGACGCATCGGCAGGC > NC_002947/3679463‑3679722 | tGGCCGGCACCACGTCCTGACGGTCCAGGCGCTGGGCGATATCACGCAACAGGATGTTGGCGCAGAGCACCACCAGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTgg < 2:484053/150‑1 (MQ=255) ggCACCACGTCCTGACGGTCCAGGCGCTGGGCGATATCACGCAACAGGATGTTGGCGCAGAGCACCACCAGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCcgcg > 2:353382/1‑150 (MQ=255) gCACCACGTCCTGACGGTCCAGGCGCTGGGCGATATCACGCAACAGGATGTTGGCGCAGAGCACCACCAGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTACACCACAAGGTGGCCGCgg > 1:456258/1‑150 (MQ=255) accacGTCCTGACGGTCCAGGCGCTGGGCGATATCACGCAACAGGATGTTGGCGCAGAGCACCACCAGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCCGCGgtg < 2:288486/150‑1 (MQ=255) acNTCCTGACGGTCCAGGCGCTGGGCGNTATCACGCAACANGATGTTNGNGCAGAGCACCACCAGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCcgcagatcgg > 1:436510/1‑143 (MQ=255) caggcatggcgcctgccgatgcgtcgcgggtcgcagcctatgtggtgtcgggcatcggctttctcggcggtggcgtcatcatgcgcgatggtttcaatgtangtggcctgaacACCGCAGCCGTGCACCACAAGGTGGCCGCGGTGTTCa > 1:330369‑M1/114‑150 (MQ=255) cGTCCTGACGGTCCAGGCGCTGGGCGATATCACGCAACAGGATGTTGGCGCAGAGCACCACCAGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCCGCGGTGTTCa < 1:353382/150‑1 (MQ=255) gTCCTGACGGTCCAGGCGCTGGGCGATATCACGCAACAGGATGTTGGCGCAGAGCACCACCAGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCCGCGGTGTTCAg < 2:538733/150‑1 (MQ=255) ccgatgcgtcgcgggtcgcagcctatgtggtgtcgggcatcggctttctcggcggtggcgtcatcatgcgcgatggtttcaatgtacgtggcctgaacACCGCAGCCGTGCACCACAAGGTGGCCGCGgtg < 2:160767‑M1/33‑1 (MQ=255) ccgatgcgtcgcgggtcgcagcctatgtggtgtcgggcatcggctttctcggcggtggcgtcatcatgcgcgatggtttcaatgtacgtggcctgaacACCGCAGCCGTGCACCACAAGGTGGCCGCGgtg > 1:160767‑M1/99‑131 (MQ=255) ggCGATATCACGCAACAGGATGTTGGCGCAGAGCACCACCAGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACaa > 2:155804/1‑111 (MQ=255) ggCGATATCACGCAACAGGATGTTGGCGCAGAGCACCACCAGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACaa < 1:155804/111‑1 (MQ=255) aCGCAACAGGATGTTGACGCAGAGCACCACCAGGCTACCAAGTGCCGCCTCCATCATCAGCCCAAGACTGCACAGCACGCCGCCCGCAGCCGTGCACCACAAGGTGTCCGCCGTGTTCAGTCCACGTACATTAAAACCATCGCACatgat > 2:237559/1‑150 (MQ=255) gCAACAGGATGTTGGCGCAGAGCACCACCAGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCCGCGGTGTTCAGGCCACGTACATTGAAACCATCGCGCAtgatga > 1:561965/1‑150 (MQ=255) gATGTTGGCGCAGAGCACCACCAGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCcgcg > 1:259092/1‑103 (MQ=255) gATGTTGGCGCAGAGCACCACCAGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCcgcg < 2:259092/103‑1 (MQ=255) gcgcAGAGCACCACCAGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCCGCGgt > 1:14237/1‑98 (MQ=255) gcgcAGAGCACCACCAGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCCGCGgt < 2:14237/98‑1 (MQ=255) gcgcAGAGCACCACCAGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCCGCGGTGTTCAGGCCACGTACATTGAAACCATCGCGCAtgatga < 2:374299/136‑1 (MQ=255) gcgcAGAGCACCACCAGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCCGCGGTGTTCAGGCCACGTACATTGAAACCATCGCGCAtgatga > 1:374299/1‑136 (MQ=255) gcAGAGCACCACCAGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCCGCGGTGTTCAGGCCACGTACATTGAAACCATCGCGCATGATGACGCCACCGCCGAGaaa > 1:399116/1‑150 (MQ=255) gcAGAGCACCACCAGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCCGCGGTGTTCAGGCCACGTACATTGAAACCATCGCGCATGATCACGCCACCGCCGAGaaa < 2:316642/150‑1 (MQ=255) caccaGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCCGCGGTGTTCAGGCCACGTACATTGAAACCATCGCGCATGATGACGCCACCGCCGAGAAAGCCGATGcc > 1:525549/1‑150 (MQ=255) caGGCTACCCCGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACACGGTGGCCGCGGTGTTCAGGCCACGTACATTGAAACCATCGCGCATGATGACGCCACCGCCGAGAAAGCCGATGCCCGa > 1:549712/1‑150 (MQ=255) caGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACCGCACGACGACCGCAGCCGTGCACCACAAGGTGGCCGCGGTGTTCAGGCCACGTACATTGAAACCATCGCGCATGATGAc < 1:383114/123‑1 (MQ=255) caGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCCGCGGTGTTCAGGCCACGTACATTGAAACCATCGCGCATGATGAc > 2:383114/1‑123 (MQ=255) aCCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCCGCGGTGTTCAGGCCACGTACATTGAAACCATCGCGCATGATGACGCCACCGCCGAGAAAGCCGATGCCCGAcaccac < 2:308571/150‑1 (MQ=255) cgccTCCATTATAAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCAGCGGTGTTCAGGCCACGTACATTGAAACCATCGCGCATGATGCCGCCACCGCCGAGAAAGCCGATGCCCGACACCACATAGGCTGc < 1:237559/150‑1 (MQ=255) cAAGGTTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCCGCGGTGTTCAGGCCACGTACATTGAAACCATCGCGCATGATGACGCCACCGCCGAGAAAGCCGATGCCCGACACCACATAGGCTGCGACCCGCGACGCATCgg < 2:54106/150‑1 (MQ=255) aaGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCCGCGGTGTTCAGGCCACGTACATTGAAACCATCGCGCATGATGACGCCACCGCCGAGAAAGCCGATGCCCGACACCACATAGGCTGCGACCCGCGACGCATAGGc > 1:258366/1‑150 (MQ=255) cTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCCGCGGTGTTCAGGCCACGTACATTGAAACCATCGCGCATGATGACGCCACCGCCGAGAAAGCCGATGCCCGACACCACATAGGCTGCGACCCGCGACGCATCGGCAGgc > 1:101258/1‑150 (MQ=255) | TGGCCGGCACCACGTCCTGACGGTCCAGGCGCTGGGCGATATCACGCAACAGGATGTTGGCGCAGAGCACCACCAGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCCGCGGTGTTCAGGCCACGTACATTGAAACCATCGCGCATGATGACGCCACCGCCGAGAAAGCCGATGCCCGACACCACATAGGCTGCGACCCGCGACGCATCGGCAGGC > NC_002947/3679463‑3679722 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |