New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3679588 =	28 (1.210)	3 (0.140)	3/240	NT	12.0%	coding (305/714 nt)	mgtC	MgtC family magnesium transporter
	?	NC_002947	3679620 =	17 (0.770)					coding (273/714 nt)	mgtC	MgtC family magnesium transporter

ACCACGTCCTGACGGTCCAGGCGCTGGGCGATATCACGCAACAGGATGTTGGCGCAGAGCACCACCAGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCCGCGGTGTTCAGGCCACGTACATTGAAACCATCGCGCATGATGACGCCACCGCCGAGAAAGCCGATGCCCGACACCACATAGGCTGCGACCCGCGACGCATCGGCAGGCGCCATGCCTGGCACCGCCTGGGTCATCAATACGAACAGG  >  NC_002947/3679471‑3679761                                                                                                                                                      |                                                                                                                                              accacGTCCTGACGGTCCAGGCGCTGGGCGATATCACGCAACAGGATGTTGGCGCAGAGCACCACCAGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCCGCGgtg                                                                                                                                               <  2:288486/150‑1 (MQ=255)     caggcatggcgcctgccgatgcgtcgcgggtcgcagcctatgtggtgtcgggcatcggctttctcggcggtggcgtcatcatgcgcgatggtttcaatgtangtggcctgaacACCGCAGCCGTGCACCACAAGGTGGCCGCGGTGTTCa                                                                                                                                           >  1:330369‑M1/114‑150 (MQ=255)     cGTCCTGACGGTCCAGGCGCTGGGCGATATCACGCAACAGGATGTTGGCGCAGAGCACCACCAGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCCGCGGTGTTCa                                                                                                                                           <  1:353382/150‑1 (MQ=255)      gTCCTGACGGTCCAGGCGCTGGGCGATATCACGCAACAGGATGTTGGCGCAGAGCACCACCAGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCCGCGGTGTTCAg                                                                                                                                          <  2:538733/150‑1 (MQ=255)                    ccgatgcgtcgcgggtcgcagcctatgtggtgtcgggcatcggctttctcggcggtggcgtcatcatgcgcgatggtttcaatgtacgtggcctgaacACCGCAGCCGTGCACCACAAGGTGGCCGCGgtg                                                                                                                                               >  1:160767‑M1/99‑131 (MQ=255)                    ccgatgcgtcgcgggtcgcagcctatgtggtgtcgggcatcggctttctcggcggtggcgtcatcatgcgcgatggtttcaatgtacgtggcctgaacACCGCAGCCGTGCACCACAAGGTGGCCGCGgtg                                                                                                                                               <  2:160767‑M1/33‑1 (MQ=255)                                    aCGCAACAGGATGTTGACGCAGAGCACCACCAGGCTACCAAGTGCCGCCTCCATCATCAGCCCAAGACTGCACAGCACGCCGCCCGCAGCCGTGCACCACAAGGTGTCCGCCGTGTTCAGTCCACGTACATTAAAACCATCGCACatgat                                                                                                            >  2:237559/1‑150 (MQ=255)                                      gCAACAGGATGTTGGCGCAGAGCACCACCAGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCCGCGGTGTTCAGGCCACGTACATTGAAACCATCGCGCAtgatga                                                                                                          >  1:561965/1‑150 (MQ=255)                                                    gcgcAGAGCACCACCAGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCCGCGGTGTTCAGGCCACGTACATTGAAACCATCGCGCAtgatga                                                                                                          <  2:374299/136‑1 (MQ=255)                                                    gcgcAGAGCACCACCAGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCCGCGGTGTTCAGGCCACGTACATTGAAACCATCGCGCAtgatga                                                                                                          >  1:374299/1‑136 (MQ=255)                                                      gcAGAGCACCACCAGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCCGCGGTGTTCAGGCCACGTACATTGAAACCATCGCGCATGATGACGCCACCGCCGAGaaa                                                                                          >  1:399116/1‑150 (MQ=255)                                                      gcAGAGCACCACCAGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCCGCGGTGTTCAGGCCACGTACATTGAAACCATCGCGCATGATCACGCCACCGCCGAGaaa                                                                                          <  2:316642/150‑1 (MQ=255)                                                               caccaGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCCGCGGTGTTCAGGCCACGTACATTGAAACCATCGCGCATGATGACGCCACCGCCGAGAAAGCCGATGcc                                                                                 >  1:525549/1‑150 (MQ=255)                                                                  caGGCTACCCCGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACACGGTGGCCGCGGTGTTCAGGCCACGTACATTGAAACCATCGCGCATGATGACGCCACCGCCGAGAAAGCCGATGCCCGa                                                                              >  1:549712/1‑150 (MQ=255)                                                                  caGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACCGCACGACGACCGCAGCCGTGCACCACAAGGTGGCCGCGGTGTTCAGGCCACGTACATTGAAACCATCGCGCATGATGAc                                                                                                         <  1:383114/123‑1 (MQ=255)                                                                  caGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCCGCGGTGTTCAGGCCACGTACATTGAAACCATCGCGCATGATGAc                                                                                                         >  2:383114/1‑123 (MQ=255)                                                                        aCCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCCGCGGTGTTCAGGCCACGTACATTGAAACCATCGCGCATGATGACGCCACCGCCGAGAAAGCCGATGCCCGAcaccac                                                                        <  2:308571/150‑1 (MQ=255)                                                                                 cgccTCCATTATAAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCAGCGGTGTTCAGGCCACGTACATTGAAACCATCGCGCATGATGCCGCCACCGCCGAGAAAGCCGATGCCCGACACCACATAGGCTGc                                                               <  1:237559/150‑1 (MQ=255)                                                                                                  cAAGGTTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCCGCGGTGTTCAGGCCACGTACATTGAAACCATCGCGCATGATGACGCCACCGCCGAGAAAGCCGATGCCCGACACCACATAGGCTGCGACCCGCGACGCATCgg                                              <  2:54106/150‑1 (MQ=255)                                                                                                   aaGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCCGCGGTGTTCAGGCCACGTACATTGAAACCATCGCGCATGATGACGCCACCGCCGAGAAAGCCGATGCCCGACACCACATAGGCTGCGACCCGCGACGCATAGGc                                             >  1:258366/1‑150 (MQ=255)                                                                                                       cTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCCGCGGTGTTCAGGCCACGTACATTGAAACCATCGCGCATGATGACGCCACCGCCGAGAAAGCCGATGCCCGACACCACATAGGCTGCGACCCGCGACGCATCGGCAGgc                                         >  1:101258/1‑150 (MQ=255)                                                                                                                 tgaacaccgcggccaccttgtggtgcacggctgcggtGTTCAGGCCACNTACATTGAAACCATCGCGCATGATGACGCCACCGCCGAGAAAGCCGATGCCCGACACCACATAGGCTGCGACCCGCGACGCATCGGCAGGCGCCATGCCTg                               >  1:330369‑M2/38‑150 (MQ=255)                                                                                                                     caccgcggccaccttgtggtgcacggctgcggtGTTCAGGCCACGTACATTGAAACCATCGCGCATGATGACGCCACCGCCGAGAAAGCCGATGCCCGACACCACATAGGCTGCGACCCGCGACGCATCgg                                              <  2:160767‑M2/98‑1 (MQ=255)                                                                                                                     caccgcggccaccttgtggtgcacggctgcggtGTTCAGGCCACGTACATTGAAACCATCGCGCATGATGACGCCACCGCCGAGAAAGCCGATGCCCGACACCACATAGGCTGCGACCCGCGACGCATCgg                                              >  1:160767‑M2/34‑131 (MQ=255)                                                                                                                        CGCAGCCGTGCACCACAAGGTGGCCGCGGTGTTCAGGCCACGTACATTGAAACCATCGCGCATGATGACGCCACCGCCGAGAAAGCCGATGCCCGACACCACATAGGCTGCGACCCGCGACGCATCGGCAGGCGCCATGCCTGGCACCGc                        >  2:549712‑M1/1‑150 (MQ=255)                                                                                                                                         aGGTGGCCGCGGTGTTCAGGCCACGTACATTGAAACCATCGCGCATGATGACGCCACAGCCGAGAAAGCCGATGCCCGACACCACATAGGCTGCGACCCGCGACGCATCGGCAGGCGCCATGCCTGGCACCGCCTGGGTCATCAATACGa       >  1:170919/1‑150 (MQ=255)                                                                                                                                              gCCGCGGTGTTCAGGCCACGTACATTGAAACCATCGCGCATGATGACGCCACCGCCGAGAAAGCCGATGCCCGACACCACATAGGCTGCGACCCGCGACGCATCGGCAGGCGCCATGCCTGGCACCGCCTGGGTCATCAATACGAAcagg  <  2:399116/150‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                              ACCACGTCCTGACGGTCCAGGCGCTGGGCGATATCACGCAACAGGATGTTGGCGCAGAGCACCACCAGGCTACCCAGTGCCGCCTCCATCATCAGCCCAAGGCTGCACAGCACGCCGACCGCAGCCGTGCACCACAAGGTGGCCGCGGTGTTCAGGCCACGTACATTGAAACCATCGCGCATGATGACGCCACCGCCGAGAAAGCCGATGCCCGACACCACATAGGCTGCGACCCGCGACGCATCGGCAGGCGCCATGCCTGGCACCGCCTGGGTCATCAATACGAACAGG  >  NC_002947/3679471‑3679761

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.