| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5373440 | 30 (1.300) | 4 (0.190) | 4/226 | NT | 13.3% | intergenic (‑65/+104) | PP_mr67/dapB | P32 ncRNA/4‑hydroxy‑tetrahydrodipicolinate reductase |
| ? | NC_002947 | = 5373519 | 25 (1.200) | intergenic (‑144/+25) | PP_mr67/dapB | P32 ncRNA/4‑hydroxy‑tetrahydrodipicolinate reductase | |||||
ATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTACAGAAAAGTGTGTTTTCGGTCTACCGCGGATGTGTCTCTAAAACACATCAATGCGACAGACTGACATCTGTGTTGGCTTCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5373281‑5373440‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgttggcttctTCGCGGGCTTGCCCGCTCCCACAGGTGCGGCGTTGCTCTTGGGCTGGTGCGATCCCTGTGGGGGCGCACCAGCCCGCGCAGAAGCCAACACAGATGTCAGTCTGTCGCATTGATGTGTTTTAGAGACACATCCGCGGTAGACCGAAAA < NC_002947/5373519‑5373372 ATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTACAGAAAAGTGTGTTTTCGGTCTACCGCGGATGTGTCTCTAAAACACATCAATGCGACAGACTGACATCTGT > 1:569736/1‑150 GGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTACAGAAAAGTGTGTTTTCGGTCTACCGCGGATGTGTCTCTAAAACACATCAATGCGACAGACTGACCTCTGTGT < 2:358745/150‑1 TTTTCGGTCTACCGCGGATGTGTCTCTAAAACACATCAATGCGACAGACTGACATCTGTGTTGGCTTCTTCGCGGGCTTGCCCGCTCCCACAGGTGCGGCGTTGCTCTTGGGCTGGTGCGATCCCTGTGGGGGCGCACCAGCCCGCGCAG > 1:373578/1‑150 CGGATGTGTCTCTAAAACACATCAATGCGACAGACTGACATCTGTGTTGGCTTCTTCGCGGGCTTGCCCGCTCCCACAGGTGCGGCGTTGCTCTTGGGCTGGTGCGATCCCTGTGGGGGCGCACCAGCCCGCGCAGAAGCCAACACAGAT < 2:373578/150‑1 CTAAAACACATCAATGCGACAGACTGACATCTGTGTTGGCTTCTTCGCGGGCTTGCCCGCTCCCACAGGTGCGGCGTTGCTCTTGGGCTGGTGCGATCCCTGTGGGG < 1:327484/107‑1 CTAAAACACATCAATGCGACAGACTGACATCTGTGTTGGCTTCTTCGCGGGCTTGCCCGCTCCCACAGGTGCGGCGTTGCTCTTGGGCTGGTGCGATCCCTGTGGGG > 2:327484/1‑107 GTGTTGGCTTCTTCGCGGGCTTGCCCGCTCCCACAGGTGCGGCGTTGCTCTTGGGCTGGTGCGATCCCTGTGGGGGCGCACCAGCCCGCGCAGAAGCCAACACAGATGTCAGTCTGTCGCATTGATGTGTTTTAGAGACACATCCGCGGT > 1:492641/1‑150 TGTTGGCTTCTTCGCGGGCTTGCCCGCTCCCACAGGTGCGGCGTTGCTCTTGGGCTGGTGCGATCCCTGTGGGGGCGCACCAGCCCGCGCAGAAGCCAACACAGATGTCAGTCTGTCGCATTGATGTGTTTTAGAGACACATCCGCGGTA < 2:492641/150‑1 TTGGCTTCTTCGCGGGCTTGCCCGCTCCCACAGGTGCGGCGTTGCTCTTGGGCTGGTGCGATCCCTGTGGGGGCGCACCAGCCCGCGCAGAAGCCAACACAGATGTCAGTCTGTCGCATTGATGTGTTTTAGAGACACATCCGCGGTAGA > 2:308596/1‑150 TTGGCTTCTTCGCGGGCTTGCCCGCTCCCACAGGTGCGGCGTTGCTCTTGGGCTGGTGCCATCCCTGTGGGGGCGCACCAGCCCGCGCAGAAGCCAACACAGATGTCAGTCTGTCGCATTGATGTGTTTTAGAGACACATCCGCGGTAGA > 2:34330/1‑150 GGCTTCTTCGCGGGCTTGCCCGCTCCCACAGGTGCGGCGTTGCTCTTGGGCTGGTGCGATCCCTGTGGGGGCGCACCAGCCCGCGCAGAAGCCAACACAGATGTCAGTCTGTCGCATTGATGTGTTTTAGAGACACATCCGCGGTAGACC < 1:19978/150‑1 GGCTTCTTCGCGGGCTTGCCCGCTCCCACAGGTGCGGCGTTGCTCTTGGGCTGGTGCGATCCCTGTGGGGGCGCACCAGCCCGCGCAGAAGCCAACACAGATGTCAGCCTGTCGCATTGATGTGTTTTAGAGACACATCCGCGGTAGACC > 1:174545/1‑150 GGCTTCTTCGCGGGCTTGCCCGCTCCCACAGGTGCGGCGTTGCTCTTGGGCTGGTGCGATCCCTGTGGGGGAGCACCAGCCCGCGCAGAAGCCAACACAGATGTCAGTCTGTCGCATTGATGTGTTTTAGAGACACATCCGCGGTAGACC > 1:174229/1‑150 CTTCGCGGGCTTGCCCGCTCCCACAGGTGCGGCGTTGCTCTTGGGCTGGTGCGATCCCTGTGGGGGCGCACCAGCCCGCGCAGAAGCCAACACAGATGTCAGTCTGTCGCATTGATGTGTTTTAGAGACACATCCGCGGTAGACCGAAAA > 2:291667/1‑150 ATGGACACGTCACCCCGCTTTCATGTGCTGAATTCAATTCGCTGCGCGCTTTTAGTGGACACACTAAAGCTGTAGCTTACAGAAAAGTGTGTTTTCGGTCTACCGCGGATGTGTCTCTAAAACACATCAATGCGACAGACTGACATCTGTGTTGGCTTCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5373281‑5373440‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgttggcttctTCGCGGGCTTGCCCGCTCCCACAGGTGCGGCGTTGCTCTTGGGCTGGTGCGATCCCTGTGGGGGCGCACCAGCCCGCGCAGAAGCCAACACAGATGTCAGTCTGTCGCATTGATGTGTTTTAGAGACACATCCGCGGTAGACCGAAAA < NC_002947/5373519‑5373372 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |