New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1251009 = | 18 (0.780) | 3 (0.140) | 3/234 | NT | 16.7% | coding (268/549 nt) | PP_1093 | electron transport complex protein |
? | NC_002947 | 1251060 = | 13 (0.600) | coding (217/549 nt) | PP_1093 | electron transport complex protein |
TGCGCAGTACTGATGGGGTGCCTGCACCAACTGTTGCTGGCGCCACTGCGTAAACACATGGCCAGCTGGGCCTATGTACTGGCTAGCCTGTTGCTGCTGGCAGCCTTGGCCAGTTGCCTGCAGTTGGCCCTGCGGGCCTGGCTGCTACCACTGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1251165‑1251009 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑actggccaAGGCTGCCAGCAGCAACAGGCTAGCCAGTACATAGGCCCAGCTGGCCATGTGTTTACGCAGTGGCGCCAGCAACAGTTGGTGCAGGCACCCCATCAGTACTGCGCACAGGCCGATGGCCGCGCCTTCAGCCAGCGTTCGGGT > NC_002947/1251060‑1251201 TGCGCAGTACTGATGGGGTGCCTGCACCAACTGTTGCTGGCGCCACTGCGTAAACACATGGCCAGCTGGGCCTATGTACTGGCTAGCCTGTTGCTGCTGGCAGCCTTGGCCAGTTGCCTGCAGTTGGCCCTGCGGGCCTGGCTGCTACCA > 2:408192/1‑150 ACATGGCCAGCTGGGCCTATGTACTGGCTAGCCTGTTGCTGCTGGCAGCCTTGGCCAGTTGCCTGCAGTTGGCCCTGCGGGCCTGGCTGCTACCACTGGC < 1:439565/100‑1 ACATGGCCAGCTGGGCCTATGTACTGGCTAGCCTGTTGCTGCTGGCAGCCTTGGCCAGTTGCCTGCAGTTGGCCCTGCGGGCCTGGCTGCTACCACTGGC > 2:439565/1‑100 TTGACCAGTTGCCTGCAGTTGGCCCTGCGGGCCTGGCTGCTACCACTGGCCAAGGCTGCCAGCAGCAACAGGCTAGCCAGTACATAGGCCCAGCTGGCCATGTGTTTACGCAGTGGCGCCAGCAACAGTTGGTGCAGGCACCCCATCAGT > 1:150200/1‑150 CAGTTGCCTGCAGTTGGCCCTGCGGGCCTGGCTGCTACCACTGGCCAAGGCTGCCAGCAGCAACAGGCTAGCCAGTACATAGGCCCAGCTGGCC > 1:605443/1‑94 CAGTTGCCTGCAGTTGGCCCTGCGGGCCTGGCTGCTACCACTGGCCAAGGCTGCCAGCAGCAACAGGCTAGCCAGTACATAGGCCCAGCTGGCC < 2:605443/94‑1 ACTGGCCAAGGCTGCCAGCAGCAACAGGCTAGCCAGTACATAGGCCCAGCTGGCCATGTGTTTACGCTGTGGCGCCAGCAACAGTTGGTGCAGGCACCCCATCAGTACTGCGCACAGGCCGATGGCCGCGCCTTCAGCCAGCGTTCGGGT < 1:221004/150‑1 TGGCCAAGGCTGCCAGCAGCAACAGGCTAGCCAGTACATAGGCCCAGCTGGCCATGTGTTTACGCAGTGGCGCCAGCAACAGT > 1:230869/1‑83 TGGCCAAGGCTGCCAGCAGCAACAGGCTAGCCAGTACATAGGCCCAGCTGGCCATGTGTTTACGCAGTGGCGCCAGCAACAGT < 2:230869/83‑1 TGCGCAGTACTGATGGGGTGCCTGCACCAACTGTTGCTGGCGCCACTGCGTAAACACATGGCCAGCTGGGCCTATGTACTGGCTAGCCTGTTGCTGCTGGCAGCCTTGGCCAGTTGCCTGCAGTTGGCCCTGCGGGCCTGGCTGCTACCACTGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1251165‑1251009 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑actggccaAGGCTGCCAGCAGCAACAGGCTAGCCAGTACATAGGCCCAGCTGGCCATGTGTTTACGCAGTGGCGCCAGCAACAGTTGGTGCAGGCACCCCATCAGTACTGCGCACAGGCCGATGGCCGCGCCTTCAGCCAGCGTTCGGGT > NC_002947/1251060‑1251201 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |